Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0905
         (624 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   0.85 
Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein...    23   6.0  
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    23   7.9  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   7.9  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 0.85
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -3

Query: 397  GSERPQDAAENADFSFSGTD*C*NSGN 317
            GSE+P++A E +  + SGTD   +SG+
Sbjct: 1348 GSEKPKNAIEPSQEAVSGTDNANDSGD 1374


>Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 553 VNNFLEKIPVYLKDYAAEVS 612
           VN   EK+P YL + +A V+
Sbjct: 88  VNAIYEKLPAYLSEVSARVN 107


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 540 FASEEIDLEVSLTSPIVIAAPMSLT 466
           F  +++DL  SLT+    AA M+ T
Sbjct: 264 FRDDQLDLYASLTTAAATAAAMTTT 288


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 439  SGSLSNDVLKGKSSGSERPQDAAENADFSFSGTD 338
            S ++ ND +K  +SGS + Q   E   F F   D
Sbjct: 1270 SVTIKNDPMK--TSGSTQQQQQMERQQFGFGNND 1301


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,704
Number of Sequences: 2352
Number of extensions: 10934
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)