Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0903
         (428 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           27   0.37 
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          26   0.65 
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    26   0.65 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   2.6  
AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    24   2.6  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   2.6  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   4.6  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   6.1  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    22   8.0  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 26.6 bits (56), Expect = 0.37
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 346  RW*ERVMFSITSWRGGYHGSSS-QL*HNAAGHKF 248
            RW  R++  I++W+G  HG  +  L    +GH F
Sbjct: 959  RWTHRIIRDISAWQGRRHGEMTFHLAQVLSGHGF 992


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 0.65
 Identities = 12/47 (25%), Positives = 19/47 (40%)
 Frame = +2

Query: 26  LNQHSSFYTCVSLEENKN*RNMGLLAAISGKRGRRCCNIWHWGSVDS 166
           L   SS   C+ +  N +      +A   G     CC +W W  ++S
Sbjct: 53  LTAQSSHTKCIPISRNASAIGENGVALKKGLPHVICCRLWRWPDLNS 99


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 25.8 bits (54), Expect = 0.65
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -2

Query: 346 RW*ERVMFSITSWRGGYHGS-SSQL*HNAAGHKF 248
           RW  RV+ +I SW+   HG  S  L    +GH F
Sbjct: 892 RWAHRVLPNIGSWQSRKHGDVSFHLCQVLSGHGF 925


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = -2

Query: 346  RW*ERVMFSITSWRGGYHGSSS-QL*HNAAGHKF 248
            RW  RV+ S+  W+   HG  +  L    +GH F
Sbjct: 955  RWTHRVIPSVGDWQSRKHGDMTFHLAQVLSGHGF 988


>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 172 TNGVNRPPVPYITAPPTAF 116
           TN   R P+P ITAP  A+
Sbjct: 54  TNAQTRIPLPNITAPDLAY 72


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -2

Query: 370  NRKGPILERW*ERVMFSITSWRGGYHGS-SSQL*HNAAGHKF 248
            N +     RW  RV+  + SW+   HG  +  L    +GH F
Sbjct: 959  NERASRYVRWAHRVIPDVGSWQSRKHGDVTFHLSQVLSGHGF 1000


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 184  STGATNGVNRPP 149
            STG++N  NRPP
Sbjct: 1627 STGSSNSCNRPP 1638


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 105 PLVVNAVGGAVIYGTGGLLTP 167
           P   NA   +   G GGLL P
Sbjct: 484 PAATNATANSTTTGAGGLLDP 504


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 178 GATNGVNRPPVPYITAPPTAFTTN 107
           G   G   P  PY+T PP    T+
Sbjct: 438 GPARGRAGPLAPYLTPPPFCIETH 461


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,983
Number of Sequences: 2352
Number of extensions: 8898
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)