Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0903
         (428 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20657-1|AAB72237.1|  963|Homo sapiens ubiquitin protease protein.     29   8.8  
BC125131-1|AAI25132.1|  963|Homo sapiens ubiquitin specific pept...    29   8.8  
BC125130-1|AAI25131.1|  963|Homo sapiens ubiquitin specific pept...    29   8.8  
AK223292-1|BAD97012.1|  963|Homo sapiens ubiquitin specific prot...    29   8.8  
AK222725-1|BAD96445.1|  916|Homo sapiens ubiquitin specific prot...    29   8.8  
AF017306-1|AAC27356.1|  916|Homo sapiens UnpES protein.                29   8.8  
AF017305-1|AAC27355.1|  963|Homo sapiens UnpEL protein.                29   8.8  
AB126079-1|BAD20206.1|  202|Homo sapiens keratin associated prot...    29   8.8  

>U20657-1|AAB72237.1|  963|Homo sapiens ubiquitin protease protein.
          Length = 963

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 219 CFLPL-FPLS*NRAREPLMESTDPQCHILQHRRPRLPLMAARSPM 88
           C+L L  PL  +R  E  +   DP C   Q+ R  +PLM A S +
Sbjct: 475 CYLTLPLPLKKDRVMEVFLVPADPHCRPTQY-RVTVPLMGAVSDL 518


>BC125131-1|AAI25132.1|  963|Homo sapiens ubiquitin specific
           peptidase 4 (proto-oncogene) protein.
          Length = 963

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 219 CFLPL-FPLS*NRAREPLMESTDPQCHILQHRRPRLPLMAARSPM 88
           C+L L  PL  +R  E  +   DP C   Q+ R  +PLM A S +
Sbjct: 475 CYLTLPLPLKKDRVMEVFLVPADPHCRPTQY-RVTVPLMGAVSDL 518


>BC125130-1|AAI25131.1|  963|Homo sapiens ubiquitin specific
           peptidase 4 (proto-oncogene) protein.
          Length = 963

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 219 CFLPL-FPLS*NRAREPLMESTDPQCHILQHRRPRLPLMAARSPM 88
           C+L L  PL  +R  E  +   DP C   Q+ R  +PLM A S +
Sbjct: 475 CYLTLPLPLKKDRVMEVFLVPADPHCRPTQY-RVTVPLMGAVSDL 518


>AK223292-1|BAD97012.1|  963|Homo sapiens ubiquitin specific
           protease, proto-oncogene isoform a variant protein.
          Length = 963

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 219 CFLPL-FPLS*NRAREPLMESTDPQCHILQHRRPRLPLMAARSPM 88
           C+L L  PL  +R  E  +   DP C   Q+ R  +PLM A S +
Sbjct: 475 CYLTLPLPLKKDRVMEVFLVPADPHCRPTQY-RVTVPLMGAVSDL 518


>AK222725-1|BAD96445.1|  916|Homo sapiens ubiquitin specific
           protease, proto-oncogene isoform b variant protein.
          Length = 916

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 219 CFLPL-FPLS*NRAREPLMESTDPQCHILQHRRPRLPLMAARSPM 88
           C+L L  PL  +R  E  +   DP C   Q+ R  +PLM A S +
Sbjct: 428 CYLTLPLPLKKDRVMEVFLVPADPHCRPTQY-RVTVPLMGAVSDL 471


>AF017306-1|AAC27356.1|  916|Homo sapiens UnpES protein.
          Length = 916

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 219 CFLPL-FPLS*NRAREPLMESTDPQCHILQHRRPRLPLMAARSPM 88
           C+L L  PL  +R  E  +   DP C   Q+ R  +PLM A S +
Sbjct: 428 CYLTLPLPLKKDRVMEVFLVPADPHCRPTQY-RVTVPLMGAVSDL 471


>AF017305-1|AAC27355.1|  963|Homo sapiens UnpEL protein.
          Length = 963

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 219 CFLPL-FPLS*NRAREPLMESTDPQCHILQHRRPRLPLMAARSPM 88
           C+L L  PL  +R  E  +   DP C   Q+ R  +PLM A S +
Sbjct: 475 CYLTLPLPLKKDRVMEVFLVPADPHCRPTQY-RVTVPLMGAVSDL 518


>AB126079-1|BAD20206.1|  202|Homo sapiens keratin associated protein
           protein.
          Length = 202

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 266 CCRP*ISVVCLCSSGCASC 210
           CC+P     C CSSGC SC
Sbjct: 144 CCKP-----CCCSSGCGSC 157


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,889,970
Number of Sequences: 237096
Number of extensions: 1348329
Number of successful extensions: 2860
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2860
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)