Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0903
         (428 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF289996-1|AAG02461.1| 1475|Drosophila melanogaster thyroid horm...    29   2.6  
AE014296-3591|AAF51757.2| 1475|Drosophila melanogaster CG7162-PA...    29   2.6  
U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade pro...    29   3.5  
BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p pro...    29   3.5  
AY052044-1|AAK93468.1|  581|Drosophila melanogaster LP06006p pro...    29   3.5  
AE014297-3585|AAS65209.1| 2832|Drosophila melanogaster CG5794-PE...    29   3.5  
AE014297-3584|AAN14009.1| 3703|Drosophila melanogaster CG5794-PB...    29   3.5  
AE014297-3583|AAF56319.2| 3912|Drosophila melanogaster CG5794-PD...    29   3.5  
AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB...    29   3.5  
J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid pr...    28   4.6  
AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p pro...    28   4.6  
AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA...    28   4.6  

>AF289996-1|AAG02461.1| 1475|Drosophila melanogaster thyroid hormone
            receptor-associatedprotein TRAP220 protein.
          Length = 1475

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +2

Query: 236  SILRKFMAGSIVSQLTAAAMVAPT 307
            S LRK MAG  VS +T+ A +APT
Sbjct: 1064 SALRKGMAGGAVSLMTSTAALAPT 1087


>AE014296-3591|AAF51757.2| 1475|Drosophila melanogaster CG7162-PA
            protein.
          Length = 1475

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +2

Query: 236  SILRKFMAGSIVSQLTAAAMVAPT 307
            S LRK MAG  VS +T+ A +APT
Sbjct: 1064 SALRKGMAGGAVSLMTSTAALAPT 1087


>U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade
           protein.
          Length = 1047

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -2

Query: 166 GVNRPPVPYITAPPTAFTTNGS*KPHVPLIFVLFERYAGIKATM 35
           G+   P P +T PPT  TT  + +PHV   +V      G+K T+
Sbjct: 650 GLPPQPQPPMTTPPTTTTTTTTPRPHVYSKYV-----CGVKGTL 688


>BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p
           protein.
          Length = 1047

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -2

Query: 166 GVNRPPVPYITAPPTAFTTNGS*KPHVPLIFVLFERYAGIKATM 35
           G+   P P +T PPT  TT  + +PHV   +V      G+K T+
Sbjct: 650 GLPPQPQPPMTTPPTTTTTTTTPRPHVYSKYV-----CGVKGTL 688


>AY052044-1|AAK93468.1|  581|Drosophila melanogaster LP06006p
           protein.
          Length = 581

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -2

Query: 166 GVNRPPVPYITAPPTAFTTNGS*KPHVPLIFVLFERYAGIKATM 35
           G+   P P +T PPT  TT  + +PHV   +V      G+K T+
Sbjct: 184 GLPPQPQPPMTTPPTTTTTTTTPRPHVYSKYV-----CGVKGTL 222


>AE014297-3585|AAS65209.1| 2832|Drosophila melanogaster CG5794-PE,
            isoform E protein.
          Length = 2832

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = -1

Query: 212  CRYSR*AETEHGSH*WSQQTPSAIYYSTADRVYH*WQLEAPCSFNFCSLRAIRRYKSYYV 33
            C ++R A  E+ +H  S Q  ++   ++A  +YH W++      N  SL AI+    YY+
Sbjct: 1116 CSFARIAMAEYDNH--SDQISAS---ASAVGMYHLWKIALRAQSNDVSLAAIQYINMYYM 1170


>AE014297-3584|AAN14009.1| 3703|Drosophila melanogaster CG5794-PB,
            isoform B protein.
          Length = 3703

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = -1

Query: 212  CRYSR*AETEHGSH*WSQQTPSAIYYSTADRVYH*WQLEAPCSFNFCSLRAIRRYKSYYV 33
            C ++R A  E+ +H  S Q  ++   ++A  +YH W++      N  SL AI+    YY+
Sbjct: 907  CSFARIAMAEYDNH--SDQISAS---ASAVGMYHLWKIALRAQSNDVSLAAIQYINMYYM 961


>AE014297-3583|AAF56319.2| 3912|Drosophila melanogaster CG5794-PD,
            isoform D protein.
          Length = 3912

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = -1

Query: 212  CRYSR*AETEHGSH*WSQQTPSAIYYSTADRVYH*WQLEAPCSFNFCSLRAIRRYKSYYV 33
            C ++R A  E+ +H  S Q  ++   ++A  +YH W++      N  SL AI+    YY+
Sbjct: 1116 CSFARIAMAEYDNH--SDQISAS---ASAVGMYHLWKIALRAQSNDVSLAAIQYINMYYM 1170


>AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB
           protein.
          Length = 1047

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -2

Query: 166 GVNRPPVPYITAPPTAFTTNGS*KPHVPLIFVLFERYAGIKATM 35
           G+   P P +T PPT  TT  + +PHV   +V      G+K T+
Sbjct: 650 GLPPQPQPPMTTPPTTTTTTTTPRPHVYSKYV-----CGVKGTL 688


>J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid
           protein protein.
          Length = 846

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 241 TTEIYGRQHCVTVDCCCHGSPH 306
           TT+  GR HCV   C CH  P+
Sbjct: 568 TTDCSGRGHCVCGACECHKRPN 589


>AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p
           protein.
          Length = 846

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 241 TTEIYGRQHCVTVDCCCHGSPH 306
           TT+  GR HCV   C CH  P+
Sbjct: 568 TTDCSGRGHCVCGACECHKRPN 589


>AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA
           protein.
          Length = 846

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 241 TTEIYGRQHCVTVDCCCHGSPH 306
           TT+  GR HCV   C CH  P+
Sbjct: 568 TTDCSGRGHCVCGACECHKRPN 589


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,755,152
Number of Sequences: 53049
Number of extensions: 413015
Number of successful extensions: 827
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)