Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0900
         (732 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9FHF0 Cluster: Disease resistance protein-like; n=1; A...    36   1.0  
UniRef50_A0DDF8 Cluster: Chromosome undetermined scaffold_46, wh...    33   5.5  
UniRef50_A5E207 Cluster: Putative uncharacterized protein; n=1; ...    33   5.5  

>UniRef50_Q9FHF0 Cluster: Disease resistance protein-like; n=1;
           Arabidopsis thaliana|Rep: Disease resistance
           protein-like - Arabidopsis thaliana (Mouse-ear cress)
          Length = 1165

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = -2

Query: 290 CSKMLDKYELGHSLFKLEINCKTLKKTIENTDNVQLYCVARNQNLFLSKQSVNNITQWT 114
           CSK+ +  E+  S  K+ +   T  KT+    +VQ  C++RN +L      +N ++Q T
Sbjct: 783 CSKLKEFPEINKSSLKILLLDGTSIKTMPQLPSVQYLCLSRNDHLIYLPAGINQVSQLT 841


>UniRef50_A0DDF8 Cluster: Chromosome undetermined scaffold_46, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_46,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 483

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
 Frame = -2

Query: 266 ELGHSLFKLEINCKTLKKTIEN----TDNVQLYCVARNQNLFLSKQSVNNITQWTFRL 105
           ELG  +   +  CK ++K I+N     D +   C+  NQNL    Q  N+I Q+  +L
Sbjct: 305 ELGFHMCDSQYGCKIIQKLIDNYPKQVDTLVQICIT-NQNLLYKSQHGNHILQYAIKL 361


>UniRef50_A5E207 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 702

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -2

Query: 281 MLDKYELGHSLFKLEINCKTLKKTIENTDNVQLYCVARNQNLFL 150
           ++ KY+   ++FK+E N +    TI NTDN+Q+      Q L L
Sbjct: 102 IVSKYKTAQNIFKMESNFQDGSVTIHNTDNLQMQVQKLMQTLTL 145


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,599,489
Number of Sequences: 1657284
Number of extensions: 11865742
Number of successful extensions: 23044
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23039
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)