Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0896
(503 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 147 1e-34
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 128 7e-29
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 105 7e-22
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 100 2e-20
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 99 7e-20
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 94 2e-18
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 91 1e-17
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 91 2e-17
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 83 5e-15
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 79 6e-14
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 79 7e-14
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 78 1e-13
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 77 2e-13
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 71 1e-11
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 70 3e-11
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 64 2e-09
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 62 9e-09
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 60 4e-08
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 60 4e-08
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 59 6e-08
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 58 1e-07
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 56 5e-07
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 53 4e-06
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 49 5e-05
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 44 0.002
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 44 0.003
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 42 0.006
UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6; Euryar... 42 0.008
UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n... 42 0.010
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 41 0.014
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 39 0.074
UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa... 37 0.22
UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environment... 37 0.30
UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome sh... 36 0.39
UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25; Bacter... 35 1.2
UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18; Bacter... 34 2.1
UniRef50_Q24E31 Cluster: Putative uncharacterized protein; n=1; ... 33 2.8
UniRef50_Q1IE02 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle cr... 32 6.4
UniRef50_Q7R3B6 Cluster: GLP_111_22446_21862; n=1; Giardia lambl... 32 6.4
UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10; Bacter... 32 6.4
UniRef50_A4CYH5 Cluster: Putative uncharacterized protein; n=1; ... 32 8.5
UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmen... 32 8.5
UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60; Bacter... 32 8.5
UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24; ... 32 8.5
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 147 bits (356), Expect = 1e-34
Identities = 71/89 (79%), Positives = 79/89 (88%), Gaps = 1/89 (1%)
Frame = +2
Query: 20 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 199
MKFN VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 200 HYKGQQVGKVMQVYRKKFV-YTLRGFKEK 283
HYKGQQ+GKV+QVYRKK+V Y R +EK
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREK 89
Score = 87.0 bits (206), Expect = 2e-16
Identities = 40/61 (65%), Positives = 50/61 (81%)
Frame = +1
Query: 247 KVCVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGK 426
K +YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGK
Sbjct: 77 KYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGK 134
Query: 427 Y 429
Y
Sbjct: 135 Y 135
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 128 bits (309), Expect = 7e-29
Identities = 59/89 (66%), Positives = 73/89 (82%)
Frame = +2
Query: 20 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 199
MKFN VTS R K HF+APSHI R +MSSPLSKELRQK+NV+SMP +KDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSMKHKWHFNAPSHILRKIMSSPLSKELRQKYNVQSMPTQKDDEVQVVRG 60
Query: 200 HYKGQQVGKVMQVYRKKFVYTLRGFKEKR 286
HY+GQQ+GKV+QVYRKK+V ++ + ++
Sbjct: 61 HYEGQQIGKVVQVYRKKYVIYIKQVEREK 89
Score = 65.3 bits (152), Expect = 7e-10
Identities = 33/61 (54%), Positives = 45/61 (73%)
Frame = +1
Query: 247 KVCVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGK 426
K +YI++++REKANG T VGIHPSK VI +LK+ +DRK IL+R+ +GK+KGK
Sbjct: 77 KYVIYIKQVEREKANGTTVRVGIHPSKVVITRLKL-EDRKKILERK-------VGKEKGK 128
Query: 427 Y 429
Y
Sbjct: 129 Y 129
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 105 bits (251), Expect = 7e-22
Identities = 49/90 (54%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
Frame = +2
Query: 17 RMKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVR 196
+MKFNKQ++S+RRK RK HF+AP+ +RR +MSS LSKELR K+ +++P+RKDDEV + R
Sbjct: 29 KMKFNKQISSARRKMRKAHFTAPAGLRRKIMSSKLSKELRLKYKTRALPVRKDDEVLICR 88
Query: 197 GHYKGQQVGKVMQVYRKKF-VYTLRGFKEK 283
GH G++ GKV+++ RK+F +Y R +EK
Sbjct: 89 GHNHGRE-GKVVKINRKRFKIYVERVTREK 117
Score = 64.9 bits (151), Expect = 1e-09
Identities = 25/44 (56%), Positives = 37/44 (84%)
Frame = +1
Query: 256 VYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRA 387
+Y+ER+ REKANG + ++GIHPS ++ KLK++K+RK ILDR+A
Sbjct: 108 IYVERVTREKANGESTFIGIHPSNVILTKLKIDKNRKKILDRKA 151
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 100 bits (240), Expect = 2e-20
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +2
Query: 20 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 199
MK N +VTSSRRK RK HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRG 60
Query: 200 HYKG 211
YKG
Sbjct: 61 SYKG 64
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 98.7 bits (235), Expect = 7e-20
Identities = 48/75 (64%), Positives = 59/75 (78%)
Frame = +2
Query: 29 NKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 208
N + SSRRK+R HF+APS RRV++S+PLS ELR K+NV+SMPIRKDDEV VVRG K
Sbjct: 5 NSSLASSRRKSRAAHFNAPSSERRVILSAPLSSELRAKYNVRSMPIRKDDEVMVVRGSNK 64
Query: 209 GQQVGKVMQVYRKKF 253
G++ GKV VYR K+
Sbjct: 65 GRE-GKVTSVYRLKW 78
Score = 59.3 bits (137), Expect = 5e-08
Identities = 27/56 (48%), Positives = 39/56 (69%)
Frame = +1
Query: 247 KVCVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 414
K +++ERI R+K+NG + + +HPS VI KL ++KDR+AIL+R KGR A K
Sbjct: 77 KWAIHVERISRDKSNGQSVPIPLHPSNVVIKKLHLDKDREAILERVGKGREAVKAK 132
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 93.9 bits (223), Expect = 2e-18
Identities = 46/77 (59%), Positives = 60/77 (77%)
Frame = +2
Query: 23 KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 202
K + V+S RRK RK +F+APS RRVL+S+PLSKELR ++ +K++PIR+DDEV VVRG
Sbjct: 3 KQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGS 62
Query: 203 YKGQQVGKVMQVYRKKF 253
KGQ+ GK+ VYR KF
Sbjct: 63 KKGQE-GKISSVYRLKF 78
Score = 54.8 bits (126), Expect = 1e-06
Identities = 23/51 (45%), Positives = 37/51 (72%)
Frame = +1
Query: 247 KVCVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRL 399
K V ++++ +EK NGA+ + +HPSK VI KL ++KDRKA++ R+ G+L
Sbjct: 77 KFAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQRKG-GKL 126
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 91.1 bits (216), Expect = 1e-17
Identities = 45/79 (56%), Positives = 60/79 (75%)
Frame = +2
Query: 20 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 199
MK++ VTSSRRK RK HF+APS RR LMS+ LS EL+ + ++PIR +DEV+V RG
Sbjct: 20 MKYSTAVTSSRRKTRKAHFTAPSSERRKLMSAALSAELKAQHGANAVPIRVNDEVRVTRG 79
Query: 200 HYKGQQVGKVMQVYRKKFV 256
+K ++ GKV+QVYRKK+V
Sbjct: 80 SFKNRE-GKVVQVYRKKWV 97
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 90.6 bits (215), Expect = 2e-17
Identities = 43/78 (55%), Positives = 61/78 (78%)
Frame = +2
Query: 20 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 199
MK + +V+S RRK R+ APS++R LMS+ LSK+LR+K+NV+++P+RKDDEV VVRG
Sbjct: 1 MKTHVEVSSQRRKGRRAQLGAPSNLRYKLMSAHLSKDLRKKYNVRALPVRKDDEVTVVRG 60
Query: 200 HYKGQQVGKVMQVYRKKF 253
+KG + GKV VYRK++
Sbjct: 61 THKGTK-GKVSSVYRKRW 77
Score = 48.8 bits (111), Expect = 7e-05
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +1
Query: 256 VYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 414
+ IE++ R KANG + I S+C+I K +N+DRK +L R+A +++ GK
Sbjct: 79 IQIEKLTRTKANGMPYQIPIRASQCIITKPYLNEDRKQLLARKASAKVSTKGK 131
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 82.6 bits (195), Expect = 5e-15
Identities = 41/82 (50%), Positives = 59/82 (71%)
Frame = +2
Query: 20 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 199
MKFN +V+S+ K RK ++AP+ R +LMS+ LSKELR+K+NV ++PI KDDEV++++G
Sbjct: 1 MKFNCKVSSNPSKARKALYTAPASQRAILMSARLSKELREKYNVIAIPIHKDDEVKIIKG 60
Query: 200 HYKGQQVGKVMQVYRKKFVYTL 265
H K GKV V R K+V +
Sbjct: 61 HQK--VAGKVTAVRRSKYVINI 80
Score = 48.8 bits (111), Expect = 7e-05
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = +1
Query: 247 KVCVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 396
K + I+++ + KANG T V I PS +I KL +NKDR+A L ++A+ R
Sbjct: 75 KYVINIDKLTKTKANGQTVPVAIRPSNVIITKLFLNKDREAYLAKKAESR 124
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 79.0 bits (186), Expect = 6e-14
Identities = 40/88 (45%), Positives = 58/88 (65%)
Frame = +2
Query: 20 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 199
MK N VT+SRRK RK +F+A + R +MSS LSKELR + +K+MPIR+ D V++ G
Sbjct: 1 MKLNSAVTASRRKCRKAYFTANAETRAKMMSSRLSKELRAEHKIKTMPIRRGDIVEIFTG 60
Query: 200 HYKGQQVGKVMQVYRKKFVYTLRGFKEK 283
+KG GKV++V R+ + + G +K
Sbjct: 61 GHKG--TGKVVEVRRRDYKICVEGINQK 86
Score = 33.1 bits (72), Expect = 3.7
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Frame = +1
Query: 247 KVCVYIERIQREKANGATAYVG--IHPSKCVIVKLKMNKDRKAILDRRAK---GRLAALG 411
K+CV E I ++ N V IHPS C+I +L MN R + RR + RLA +G
Sbjct: 77 KICV--EGINQKARNPEAKPVPYPIHPSNCIIKELYMNGSRYRAIKRRQERNAERLARIG 134
Query: 412 K 414
K
Sbjct: 135 K 135
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 78.6 bits (185), Expect = 7e-14
Identities = 37/58 (63%), Positives = 46/58 (79%)
Frame = +1
Query: 256 VYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 429
+++ERI REK NG+T VGIHPSK V+ KLK++KDRKAILDR+A GR A K KGK+
Sbjct: 89 IHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASGR--AADKAKGKF 144
Score = 54.0 bits (124), Expect = 2e-06
Identities = 28/56 (50%), Positives = 42/56 (75%)
Frame = +2
Query: 89 HIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFV 256
H+RR L +P ++++ + P+RKDDEVQVVRG YKG++ GKV+QVYR+++V
Sbjct: 40 HVRRALHRAP--PQVQRPLH----PVRKDDEVQVVRGSYKGRE-GKVVQVYRRRWV 88
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 77.8 bits (183), Expect = 1e-13
Identities = 40/69 (57%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = +2
Query: 101 VLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVY-RKKFVYTLRGFK 277
+LMS+PLS LR K+NV+SMPIRKDDEVQVVRG +KG++ GKV+QVY +K+ ++ R
Sbjct: 46 LLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE-GKVVQVYCQKRVIHVKRISH 104
Query: 278 EKRPMEQQH 304
EK P+ H
Sbjct: 105 EKIPIGFPH 113
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 77.0 bits (181), Expect = 2e-13
Identities = 36/61 (59%), Positives = 47/61 (77%)
Frame = +1
Query: 247 KVCVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGK 426
K +YIE +Q+EKANG T +VGIHPSK VI +LK++KDRK I +++AK A GK+KGK
Sbjct: 59 KYVIYIEWVQQEKANGTTVHVGIHPSKAVITRLKLDKDRKKIPEQKAKSHQA--GKEKGK 116
Query: 427 Y 429
Y
Sbjct: 117 Y 117
Score = 65.3 bits (152), Expect = 7e-10
Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 2/54 (3%)
Frame = +2
Query: 131 LRQKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMQVYRKKFVYTLRGFKEKR 286
L NV+SMP RKD+EVQVVR GHYKGQQ+G V+QVYRKK+V + ++++
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEK 71
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 71.3 bits (167), Expect = 1e-11
Identities = 37/89 (41%), Positives = 58/89 (65%)
Frame = +2
Query: 20 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 199
M F K + RK RK F+AP H+RR +MS+ LSKEL++K ++P+RK D V+++RG
Sbjct: 1 MAFTK--SKQPRKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRG 58
Query: 200 HYKGQQVGKVMQVYRKKFVYTLRGFKEKR 286
+KG + G+V++V K++ + G KR
Sbjct: 59 DFKGLE-GEVIKVDLKRYRIYVEGANNKR 86
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 69.7 bits (163), Expect = 3e-11
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +2
Query: 41 TSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQV 220
+S RK RK F+AP H R+ LMS+ L ELR+KFN +S+P+R+ D V+++RG +KG +
Sbjct: 6 SSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHE- 64
Query: 221 GKVMQVYRKKFVYTLRG 271
G+V++V K+ + G
Sbjct: 65 GEVVEVDLKRLRIYVEG 81
Score = 33.5 bits (73), Expect = 2.8
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 256 VYIERIQREKANGATAYVGIHPSKCVIVKLKMNKD-RKAILDR 381
+Y+E E+ANG Y IHPS +I++ ++ R+ I++R
Sbjct: 77 IYVEGATIERANGEKVYYPIHPSNVMIIEPNLDDPMRRKIIER 119
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 63.7 bits (148), Expect = 2e-09
Identities = 30/67 (44%), Positives = 48/67 (71%)
Frame = +2
Query: 53 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 232
RK RK +AP H RR +M SPLSKELR+K ++++PI+ D V+V RG+++G++ G+V+
Sbjct: 23 RKQRKYIINAPLHRRRKMMRSPLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVI 81
Query: 233 QVYRKKF 253
+ K +
Sbjct: 82 DIDPKYY 88
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 61.7 bits (143), Expect = 9e-09
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Frame = +1
Query: 256 VYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR---LAALGKDK 420
+ ++ REK NG T +V +HPS C+I KLKM+K RK +++RR GR LA LG +K
Sbjct: 80 IVVDSFTREKLNGQTVHVSVHPSNCLITKLKMDKQRKELIERRRAGREKILAKLGHNK 137
Score = 52.8 bits (121), Expect = 4e-06
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Frame = +2
Query: 20 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 199
+K N ++S +K RK F+A + +S+ L+KE + VK +PIR+DDEV + G
Sbjct: 2 VKTNPFLSSQAKKTRKAFFNATKDDKHRQLSAKLNKEQAETHGVKQLPIRRDDEVSINSG 61
Query: 200 HYKGQQVGKVMQVYRKKFVYTLRGF-KEKRPMEQQHMS 310
+ G++ GKV+ V + + F +EK + H+S
Sbjct: 62 KFAGRE-GKVIAVKLSENRIVVDSFTREKLNGQTVHVS 98
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 59.7 bits (138), Expect = 4e-08
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +2
Query: 32 KQVTSSRRKNRKRH-FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 208
K +S K RKR + AP HIR + +PLS EL+QK +K + +RK D V +VRG +K
Sbjct: 3 KGTSSKPGKVRKREVYDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFK 62
Query: 209 GQQVGKVMQVYRKK 250
G + GKV V KK
Sbjct: 63 GHE-GKVTSVDVKK 75
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 59.7 bits (138), Expect = 4e-08
Identities = 28/83 (33%), Positives = 54/83 (65%)
Frame = +2
Query: 38 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 217
++S K RK ++ P+H+R L+++ LS++L +++ +K + IRK D V+++RG G +
Sbjct: 2 ISSKPSKQRKLVYNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE 61
Query: 218 VGKVMQVYRKKFVYTLRGFKEKR 286
GKV++V RK+ + G +K+
Sbjct: 62 -GKVVEVDRKRGRVAIEGLTKKK 83
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 58.8 bits (136), Expect = 6e-08
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +2
Query: 41 TSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQV 220
+S RK K AP H RR L+++PLSK+L+++ ++ +P+R D V ++RG +KG +
Sbjct: 7 SSQPRKQHKALTKAPWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR- 65
Query: 221 GKVMQV-YRKKFVY 259
GKV +V Y++ +Y
Sbjct: 66 GKVTRVDYKRVRIY 79
Score = 41.9 bits (94), Expect = 0.008
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 247 KVCVYIERIQREKANGATAYVGIHPSKCVIVKL-KMNKDRKAILDRRAKGRLAALG 411
+V +Y++ +K +G Y IHPSK VIV+L + +K R A +D+ K R A G
Sbjct: 75 RVRIYVDSASFKKPSGEAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKAREAKAG 130
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 58.0 bits (134), Expect = 1e-07
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +2
Query: 32 KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 211
KQ TSSRRK RK HF+ +R+ S+ LS+ELR+++ ++ P+R D V V G + G
Sbjct: 6 KQKTSSRRKQRKAHFACNDGEKRIRSSARLSRELRKEYGFRTFPLRTGDTVVVKGGKFDG 65
Query: 212 QQVGKVMQV-YRKKFVY 259
++ G + ++ YR VY
Sbjct: 66 KE-GVISKINYRDYKVY 81
Score = 35.5 bits (78), Expect = 0.69
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +1
Query: 256 VYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 396
VYIE K +G A V I+PSK I K + RK L+R+ + R
Sbjct: 80 VYIEGCFVTKNDGTNALVPIYPSKLTITKFFLENGRKEQLERKKRAR 126
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 56.0 bits (129), Expect = 5e-07
Identities = 29/73 (39%), Positives = 47/73 (64%)
Frame = +2
Query: 20 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 199
MK+ VT SRRKNRKR F ++ + LSKE+++ K++ ++K+ E++V RG
Sbjct: 1 MKYKHHVTCSRRKNRKRCFLNLKRKNSNIIKTNLSKEMQKYHKKKTLILKKNYEIKVKRG 60
Query: 200 HYKGQQVGKVMQV 238
+KG + GKV+Q+
Sbjct: 61 DFKG-KTGKVIQI 72
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 52.8 bits (121), Expect = 4e-06
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +2
Query: 32 KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 211
+ V+ RK RK ++AP HIR+ M + LS+ L +++ +S + D V+++RG +KG
Sbjct: 6 EMVSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKG 65
Query: 212 QQVGKVMQV 238
+ GKV V
Sbjct: 66 TE-GKVQSV 73
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 49.2 bits (112), Expect = 5e-05
Identities = 28/81 (34%), Positives = 47/81 (58%)
Frame = +2
Query: 44 SSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVG 223
+++ +NR+ + A + R + + SPLSKELR K+ +S+ + + D V VVRG YK G
Sbjct: 3 ATKMRNRQI-YQASTRTRSMQVGSPLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-G 60
Query: 224 KVMQVYRKKFVYTLRGFKEKR 286
KV V + + G K+++
Sbjct: 61 KVSHVDTESGSVAIEGIKKEK 81
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 44.0 bits (99), Expect = 0.002
Identities = 23/58 (39%), Positives = 36/58 (62%)
Frame = +2
Query: 113 SPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVYTLRGFKEKR 286
+PLS EL +++ +K + IRKDD V+V+RG G + GKV QV+ + + G K+
Sbjct: 8 APLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEGLTRKK 64
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 43.6 bits (98), Expect = 0.003
Identities = 22/78 (28%), Positives = 42/78 (53%)
Frame = +2
Query: 53 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 232
+ K + A + + S LSK+L++K+ +S+ + + D V ++RG +KG GKV
Sbjct: 5 KMRNKMIYRASYQTKSKQLGSALSKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVA 63
Query: 233 QVYRKKFVYTLRGFKEKR 286
+V K + G K+++
Sbjct: 64 EVSTAKSSVAIEGVKKEK 81
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 42.3 bits (95), Expect = 0.006
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 20 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSP 118
M FN +T NRKRH +APSH+RR +MSSP
Sbjct: 97 MNFNPFLTWGCSTNRKRHVNAPSHVRRNIMSSP 129
>UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 120
Score = 41.9 bits (94), Expect = 0.008
Identities = 22/67 (32%), Positives = 39/67 (58%)
Frame = +2
Query: 56 KNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 235
K RK AP H R + + LS +LR+++ +++ + D V+V+RG + G++ G+V+
Sbjct: 7 KQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEE-GEVIN 65
Query: 236 VYRKKFV 256
V K V
Sbjct: 66 VDLDKAV 72
>UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n=2;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L24P - Picrophilus torridus
Length = 154
Score = 41.5 bits (93), Expect = 0.010
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +2
Query: 119 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVYTLRG 271
LSK+LR+K+ ++ P+ K D V+++ G KG+ GKV+ V K ++ G
Sbjct: 10 LSKDLRKKYGIRRFPVAKGDIVKIISGSRKGEG-GKVVDVDHKTMKVSIEG 59
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 41.1 bits (92), Expect = 0.014
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2
Query: 119 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQV 238
LSK+LR+K+ ++S PI K D V+VV G KG+ GKV +V
Sbjct: 9 LSKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEV 47
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 38.7 bits (86), Expect = 0.074
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = +2
Query: 149 VKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVYTLRGFKEKRPMEQQHMSA 313
+K IRKDD+V V+ G KG ++GKV++V RKK R EK + ++HM A
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRKKD----RVLVEKVNVAKRHMRA 50
>UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0150000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 283
Score = 37.1 bits (82), Expect = 0.22
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = -2
Query: 256 HKLFTIHLHHFANLLAFVVSTYNLNFIVFANRHGFYIEFLS*FLRQGRGHQHSPYM*RST 77
H + LHH L A V ++L+ +V A+ G + ++ +G GH+ + R
Sbjct: 119 HPPAAVDLHHLP-LAALVAPPHHLHLVVLADGDGADVVLVAELGGEGGGHEDAADGGRRR 177
Query: 76 EMPLPVFPS*GSHLLVELH 20
E+ LP P H V LH
Sbjct: 178 EVRLPALPPGARHAWVALH 196
>UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environmental
samples|Rep: Ribosomal protein L24 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 145
Score = 36.7 bits (81), Expect = 0.30
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 38 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY 205
V+ K R+ AP H+RR M S L + +++S+ IR D V+V+RG +
Sbjct: 2 VSKKAGKQRQAQTDAPVHVRRKRMRSRLISDEPDLQSIRSVTIRVGDTVEVLRGDF 57
>UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
SCAF14705, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2759
Score = 36.3 bits (80), Expect = 0.39
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2
Query: 472 YLFKRPPWLWQFPRCIYPCLCQVQPVCPLLCDRGLLCG 359
YL P W W FP P L ++Q +CP DR L CG
Sbjct: 2559 YLMNNPSWSWVFP----PDLLRLQRMCPEKMDRFLCCG 2592
>UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25;
Bacteria|Rep: 50S ribosomal protein L24 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 132
Score = 34.7 bits (76), Expect = 1.2
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +2
Query: 83 PSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVYT 262
PS IRR L+ P ++ R K M I++ D VQV+ G KG ++G+V++V+ ++ +
Sbjct: 7 PSQIRR-LVRRPGIRKHRNSLRYK-MRIKQGDTVQVISGDDKG-KIGEVLRVFPERNMVL 63
Query: 263 LRG 271
+ G
Sbjct: 64 VEG 66
>UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18;
Bacteria|Rep: 50S ribosomal protein L24 - Thermus
thermophilus
Length = 110
Score = 33.9 bits (74), Expect = 2.1
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 158 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVYTLRG 271
M ++K D V V G YKG +VGKV +V KK+ + G
Sbjct: 5 MHVKKGDTVLVASGKYKG-RVGKVKEVLPKKYAVIVEG 41
>UniRef50_Q24E31 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 634
Score = 33.5 bits (73), Expect = 2.8
Identities = 21/93 (22%), Positives = 42/93 (45%)
Frame = +2
Query: 23 KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 202
+FN Q TSS +N++ + PS RR +E +++ + I D+ +
Sbjct: 309 QFNNQETSSTYQNQRNNRREPSEFRRNNQERYQKREGEEQYRPRKESITWDE-------Y 361
Query: 203 YKGQQVGKVMQVYRKKFVYTLRGFKEKRPMEQQ 301
+ K+ + KF Y RG ++ P++++
Sbjct: 362 FNLYATNKIHNISEAKFPYNFRGMQDFVPIKKE 394
>UniRef50_Q1IE02 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas entomophila L48|Rep: Putative
uncharacterized protein - Pseudomonas entomophila
(strain L48)
Length = 175
Score = 32.7 bits (71), Expect = 4.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 286 PFLFESSQCIHKLFTIHLHHFANLLAFVVSTYNLNFIVFANRH 158
PFL ESSQ I+ F + F +L F+ +N N + ++H
Sbjct: 28 PFLSESSQTIYTWFLVGFPFFLTVLFFLTLNFNSNTLFAPDKH 70
>UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle craft
CG3647-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to shuttle craft CG3647-PA, isoform A
- Apis mellifera
Length = 1087
Score = 32.3 bits (70), Expect = 6.4
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -2
Query: 433 RCIYPCLCQVQPVCPLLCDRGLLCGLYSSST*QSHTLKGECR 308
+C C +++ +CPL+C + L CG + + KG C+
Sbjct: 652 KCNQLCCIEIEHICPLICSKTLSCGRHKC---EQRCHKGRCQ 690
>UniRef50_Q7R3B6 Cluster: GLP_111_22446_21862; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22446_21862 - Giardia lamblia
ATCC 50803
Length = 194
Score = 32.3 bits (70), Expect = 6.4
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = -2
Query: 259 IHKLFTIHLHHFANLLAFVVSTY-NLNFIVFANRHGFYIEFLS*FLRQGRGHQHSPYM*R 83
+H + H NL +V+T NL+ + A+ HG + + L Q RGH P +
Sbjct: 20 LHADLVVPAAHLDNLPGSLVATRENLDDVSPADGHGLDLVLCAKLLGQARGHHLGPGLCV 79
Query: 82 STEMPLPVFPS*GSHLLVELHS 17
S E+ L + VELHS
Sbjct: 80 SCEVSLAALATGRGDGGVELHS 101
>UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10;
Bacteria|Rep: 50S ribosomal protein L24 - Aquifex
aeolicus
Length = 132
Score = 32.3 bits (70), Expect = 6.4
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2
Query: 164 IRKDDEVQVVRGHYKGQQVGKVMQVYRK 247
I+K D V VVRG KG+Q GKV++VY +
Sbjct: 6 IKKGDTVLVVRGKEKGKQ-GKVLKVYER 32
>UniRef50_A4CYH5 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. WH 7805|Rep: Putative uncharacterized
protein - Synechococcus sp. (strain WH7805)
Length = 260
Score = 31.9 bits (69), Expect = 8.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 459 GLHGCGSFLGVFTLVFAKCSQSALCSAIEDCFAVFIHLQLDNHTL 325
GL GCG F FT + K + A S +D F+ F+ L ++ +
Sbjct: 68 GLDGCGKFFRSFTKLHPKSASLAYGSKSKDSFSYFLDFTLSHNLI 112
>UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmental
samples|Rep: Ribosomal protein L21E - uncultured
archaeon GZfos17A3
Length = 130
Score = 31.9 bits (69), Expect = 8.5
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +2
Query: 29 NKQVTSSR--RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 202
NKQ+ S RK ++ S P R + SP+SK ++Q +S+ IR D V H
Sbjct: 18 NKQMARSHGERKRTRKKLSKPKRARGL---SPISKAIQQFEPGESVHIRIDPSVHKGMPH 74
Query: 203 YKGQ-QVGKVMQVYRKKFVYTLRGFKEKR 286
+ GKV+ + F+ + K KR
Sbjct: 75 QRFHGMTGKVIGERGRAFIVEISDGKRKR 103
>UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60;
Bacteria|Rep: 50S ribosomal protein L24 - Rickettsia
prowazekii
Length = 113
Score = 31.9 bits (69), Expect = 8.5
Identities = 13/38 (34%), Positives = 26/38 (68%)
Frame = +2
Query: 158 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVYTLRG 271
+ ++K DEV ++ G YKG++ GKV++V+ ++ + G
Sbjct: 4 LKVKKGDEVVIITGKYKGKK-GKVLKVFPEENTVVVSG 40
>UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24;
n=6; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L24 - Guillardia theta (Cryptomonas phi)
Length = 101
Score = 31.9 bits (69), Expect = 8.5
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +2
Query: 158 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVYTLRGFKEK 283
M I++ D+VQV+ G YKG ++ +V++V RK L+ K
Sbjct: 1 MTIKQGDKVQVIAGSYKG-EITEVLKVIRKSNSLILKNINIK 41
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,692,510
Number of Sequences: 1657284
Number of extensions: 10099152
Number of successful extensions: 28023
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 27064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28008
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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