Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0896
(503 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY752905-1|AAV30079.1| 100|Anopheles gambiae peroxidase 11 prot... 27 0.48
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 27 0.48
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 25 1.1
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 25 1.1
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 25 1.1
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 25 1.1
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 25 1.1
AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical prot... 25 1.5
AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450 pr... 24 2.5
AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450 CY... 24 3.4
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 23 5.9
>AY752905-1|AAV30079.1| 100|Anopheles gambiae peroxidase 11
protein.
Length = 100
Score = 26.6 bits (56), Expect = 0.48
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 196 TYNLNFIVFANRHGFYIEFLS*FLRQGRGHQHSPY 92
T+ L ++FA R+ F + S +++GR H PY
Sbjct: 27 TFGLTRLLFAGRNPFGSDLASLNIQRGRDHALRPY 61
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 26.6 bits (56), Expect = 0.48
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = -2
Query: 271 SSQCIHKLFTIHLHHFA---NLLAFVVSTYNLNFIVFAN 164
SS+C+ K+F + H+F NL FVV ++ +V ++
Sbjct: 1667 SSECLMKIFALRYHYFIEPWNLFDFVVVILSILGLVLSD 1705
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.4 bits (53), Expect = 1.1
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -3
Query: 468 CLRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 349
C G C SF G F Q ALCS+ EDC +H
Sbjct: 42 CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.4 bits (53), Expect = 1.1
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -3
Query: 468 CLRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 349
C G C SF G F Q ALCS+ EDC +H
Sbjct: 42 CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.4 bits (53), Expect = 1.1
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -3
Query: 468 CLRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 349
C G C SF G F Q ALCS+ EDC +H
Sbjct: 42 CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.4 bits (53), Expect = 1.1
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -3
Query: 468 CLRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 349
C G C SF G F Q ALCS+ EDC +H
Sbjct: 42 CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 25.4 bits (53), Expect = 1.1
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -3
Query: 468 CLRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 349
C G C SF G F Q ALCS+ EDC +H
Sbjct: 618 CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 657
>AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical protein
protein.
Length = 278
Score = 25.0 bits (52), Expect = 1.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 121 QGRGHQHSPYM*RSTEMPLPVFPS*G 44
Q GH HS +S +P+PVF G
Sbjct: 150 QAAGHLHSSVSEKSKTVPVPVFQKVG 175
>AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450
protein.
Length = 507
Score = 24.2 bits (50), Expect = 2.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 150 TLNFCLSSLDRGEDINTRL 94
T+NFCL L + DI RL
Sbjct: 319 TMNFCLYELAKNPDIQGRL 337
>AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450
CYP6P2 protein.
Length = 507
Score = 23.8 bits (49), Expect = 3.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 150 TLNFCLSSLDRGEDINTRL 94
T+NFCL L + DI RL
Sbjct: 320 TMNFCLYELAKHPDIQERL 338
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
structural protein protein.
Length = 1645
Score = 23.0 bits (47), Expect = 5.9
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 273 SKRKGQWSNSICRHSPF-KVCDCQVEDE*RPQSN-PRSQSKGQTGCTWQRQG*IHRGNCH 446
S++ SNS+ HS + V + E E P S+S+ + +H G+ H
Sbjct: 1266 SRKNSADSNSVATHSSYYSVTGVEPEKEFVVMPRLPPSRSEDTLNSSHLHHH-LHHGHHH 1324
Query: 447 SHGG 458
HGG
Sbjct: 1325 HHGG 1328
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,749
Number of Sequences: 2352
Number of extensions: 12453
Number of successful extensions: 30
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -