Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0888
(686 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0202 - 20876793-20877142,20877380-20879512,20884063-20884732 36 0.040
12_02_0642 + 21454142-21454251,21454683-21454872,21454988-214550... 31 1.1
12_02_0639 + 21443480-21443589,21444022-21444211,21444327-214444... 31 1.1
12_02_0633 + 21402847-21402862,21403143-21404975,21405052-214051... 31 1.1
10_08_0848 + 21035446-21035461,21035742-21036233,21036400-210369... 31 1.1
05_03_0187 + 9413575-9414895,9415014-9415289,9415513-9415631,941... 31 1.1
05_03_0065 - 7953414-7953845,7953963-7954081,7954158-7955990,795... 31 1.1
01_06_0544 + 30118208-30118417,30118959-30119063,30119179-301192... 31 1.1
01_04_0076 + 15780981-15780996,15781277-15783109,15783186-157833... 31 1.1
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 29 2.6
02_04_0393 - 22581651-22582046,22582191-22582196 29 2.6
02_02_0444 + 10340927-10341063,10341157-10341241,10341480-103415... 29 2.6
05_01_0405 - 3191639-3192059,3192107-3192234,3192312-3192440,319... 29 3.5
03_02_0119 - 5725588-5726688,5726793-5726894 29 3.5
10_01_0044 - 583349-584044 29 4.6
02_05_1336 + 35773629-35773856,35773931-35774085,35774217-357745... 29 4.6
09_04_0421 + 17417851-17418840 28 6.0
03_05_0541 + 25381403-25382077,25382555-25383904,25386267-253864... 28 6.0
10_06_0012 - 9586478-9588880 28 8.0
09_04_0754 - 19946423-19947061,19947315-19947429,19947509-199475... 28 8.0
09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504... 28 8.0
07_01_0452 - 3418572-3418763,3419140-3419223 28 8.0
05_01_0120 - 828834-831143 28 8.0
03_03_0204 + 15436660-15437244,15437355-15437632,15438792-154390... 28 8.0
>02_04_0202 - 20876793-20877142,20877380-20879512,20884063-20884732
Length = 1050
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 236 PKQPSSFTNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIV 412
PK+ SS N N+ I +N +G LPL + G N + N ++ P ++ +C +V
Sbjct: 371 PKEISSLMNLNILHIDQNNLSGELPLGLCAGGQLQNFTAQDNNLVGPLPTSLLNCKTLV 429
>12_02_0642 +
21454142-21454251,21454683-21454872,21454988-21455069,
21455224-21455802,21455854-21456909,21457133-21457251,
21457369-21457812
Length = 859
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 316 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 420
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 157 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 191
>12_02_0639 +
21443480-21443589,21444022-21444211,21444327-21444408,
21444563-21445054,21445221-21446246,21446470-21446588,
21446706-21447149
Length = 820
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 316 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 420
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 157 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 191
>12_02_0633 +
21402847-21402862,21403143-21404975,21405052-21405170,
21405288-21405722
Length = 800
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 316 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 420
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>10_08_0848 +
21035446-21035461,21035742-21036233,21036400-21036956,
21037084-21037539,21037886-21038302
Length = 645
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 316 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 420
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>05_03_0187 +
9413575-9414895,9415014-9415289,9415513-9415631,
9415749-9416192
Length = 719
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 316 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 420
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 39 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 73
>05_03_0065 -
7953414-7953845,7953963-7954081,7954158-7955990,
7957103-7957559
Length = 946
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 316 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 420
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 182 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 216
>01_06_0544 +
30118208-30118417,30118959-30119063,30119179-30119260,
30119415-30121250,30121327-30121445,30121563-30122006
Length = 931
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 316 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 420
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 162 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 196
>01_04_0076 +
15780981-15780996,15781277-15783109,15783186-15783304,
15783422-15783724
Length = 756
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 316 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 420
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = -3
Query: 672 LRFRAWLLPPNWPSRIQTVTCWSATSLSSSVTDNVRAQAEANQVDSTPIAASVVESQTKK 493
L + A LL N+P I+ C +++S+ DN++A +A+ + E K+
Sbjct: 364 LNYLAPLLARNYPKSIKKQACLIVSNISTGSKDNIQAVIDADVISPLIFLLKTSEKDIKE 423
>02_04_0393 - 22581651-22582046,22582191-22582196
Length = 133
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -1
Query: 671 YGSGLGCYHPTGPAGSKP*--PVGLPPACRPALPTTCA 564
Y G G YHP G P P G P C P+ +TC+
Sbjct: 94 YHHGYGYYHPGGVYHHHPGYGPHGCPCGCNPSPDSTCS 131
>02_02_0444 +
10340927-10341063,10341157-10341241,10341480-10341537,
10343738-10345885,10345943-10346388
Length = 957
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +1
Query: 550 GFSLGAHVVGNAGRQAGGRPTGYGLDPAGPVGW 648
G G VVG G GG G GLD AG GW
Sbjct: 144 GLDGGGDVVGG-GLDGGGEVLGGGLDEAGGGGW 175
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +1
Query: 550 GFSLGAHVVGNAGRQAGGRPTGYGLDPAGPVGW 648
G + G VVG G GG G GLD G GW
Sbjct: 436 GLNGGGGVVGG-GLDGGGEVLGGGLDEGGGGGW 467
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 550 GFSLGAHVVGNAGRQAGGRPTGYGLDPAGPVGW 648
G G VVG G GG G GLD G GW
Sbjct: 583 GLDGGGDVVGG-GLDGGGEVLGGGLDEGGGGGW 614
>05_01_0405 -
3191639-3192059,3192107-3192234,3192312-3192440,
3193538-3193616,3193716-3193879,3193968-3194153,
3194258-3194389,3194484-3194575,3195054-3195150,
3195258-3195485
Length = 551
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = -3
Query: 669 RFRAWLLPPNWPSRIQTVTCWSATSLSSSVTDNVRAQAEANQVDSTPIAASVVESQTK 496
RF A+L ++P ++Q W+ T+++S +DN + E+ V PI ++ S ++
Sbjct: 125 RFIAFLQREDYP-QLQFEAAWALTNIASGTSDNTKVVVESGAV---PIFVKLLSSPSE 178
>03_02_0119 - 5725588-5726688,5726793-5726894
Length = 400
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = -3
Query: 594 LSSSVTDNVRAQAEANQVDSTPIAASVVESQTKKLPRNCPTLGTPLTAVLYRPLARPR 421
L S+ + VR A + + A E Q K PRN P+L T T PL PR
Sbjct: 320 LRFSLEEAVRRAELAEEAKAALERALREEIQRKAQPRNTPSLTTTTTTPAKPPLTGPR 377
>10_01_0044 - 583349-584044
Length = 231
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -2
Query: 496 KVAKELSDTGNSIDGSVV*TVGKTTPVHNNNVAVGDGQQGGADH--GVH 356
+V ++ TG+S DG + +G + N G Q+ DH GVH
Sbjct: 79 RVVADVPGTGSSKDGEMKQALGGSAQPSNKGATNGSAQENQGDHSQGVH 127
>02_05_1336 +
35773629-35773856,35773931-35774085,35774217-35774549,
35774615-35774927,35776992-35777168,35777281-35777397,
35777532-35777698,35777800-35778024,35778127-35778448,
35778542-35778786,35778993-35779131,35779212-35779304,
35779509-35779577
Length = 860
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 325 PRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGLAWSCQRSIQHCRQWS 465
P L +Q E +P R+ R + ++ C L W+ S+Q +WS
Sbjct: 812 PTLGEQPAQPTESAEPNRIIPRPKERQDCNQLTWTTAPSLQFLNRWS 858
>09_04_0421 + 17417851-17418840
Length = 329
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 535 RVHLIGFSLGAHVVGNAGRQAGGRPTGYGL 624
RVH+ G S GA++ +A +AG G+G+
Sbjct: 163 RVHVGGESAGANIAHHAAMRAGAEELGHGV 192
>03_05_0541 +
25381403-25382077,25382555-25383904,25386267-25386402,
25386642-25387126
Length = 881
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 138 VPHLVDLEEPADEDILMSRNGANNQYWLFTRRNQNNHQVLQMAMSTLSGTRTTMETC 308
+P +D E + L+S+ G N WL++ N H V T G ++ E C
Sbjct: 233 MPETID-EFEVNFKALISKVGPGNSEWLYSVYNCRQHWVPVYLRDTFFGDESSKEEC 288
>10_06_0012 - 9586478-9588880
Length = 800
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 332 WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVN 460
W++NG + V P L SD N++++D + N +++T VN
Sbjct: 78 WSANGENPVVDPASPELAISSDGNMVILD-QVTKNIIWSTHVN 119
>09_04_0754 -
19946423-19947061,19947315-19947429,19947509-19947587,
19947863-19948007
Length = 325
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Frame = -3
Query: 588 SSVTDNVRAQAEANQVDSTPIAASVVESQTKKLPRNCPTLGTPLTAVL------YRPLAR 427
+S + + ++ +TP A S S K + P L TA Y PL
Sbjct: 121 TSTSTRTESPTSSSSKSATPTARSSSSSSKKNFTKGDPALSEVTTAYKMDKRSSYTPLKN 180
Query: 426 PRQSTTITLQSETASKAGR 370
+Q T +S ASKA +
Sbjct: 181 IQQLAAPTTKSTAASKAAK 199
>09_02_0152 +
5040845-5041001,5042645-5042757,5043556-5043816,
5043954-5044058,5044726-5044791,5044882-5044999,
5045018-5045103,5045900-5046424,5046534-5047115,
5047203-5047385,5049326-5049392,5049685-5049791,
5049977-5050076,5050228-5050313,5050394-5050485,
5050591-5050705,5050792-5050983
Length = 984
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 387 PSPTATLLLWTGVVLPTVYTTLPSMEFPVSDSSLATFWSGSQQRRRQLGSSPLDWLQLGR 566
P P+AT +G V+P + ++L + +S ++ + R R L PL LQ R
Sbjct: 341 PLPSATSAFHSGGVIPNLRSSLAANPSGFLSTSTSSTVEETPYRTRPLSGGPLSKLQAPR 400
Query: 567 A 569
+
Sbjct: 401 S 401
>07_01_0452 - 3418572-3418763,3419140-3419223
Length = 91
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -3
Query: 495 KLPRNCPTLGTPL---TAVLYRPLARPRQSTTITLQSET 388
KL NCPT G P T L +PL R + T L S T
Sbjct: 42 KLKINCPTTGLPSVDHTNHLIKPLGCARDANTTALYSTT 80
>05_01_0120 - 828834-831143
Length = 769
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 173 VGRFFQVNEVRNTLAIRHPNVSAYTFHIV 87
VG FF + E+ NTL ++ P + Y + V
Sbjct: 731 VGDFFHLKELGNTLPVKVPTLILYNIYFV 759
>03_03_0204 +
15436660-15437244,15437355-15437632,15438792-15439068,
15439160-15439405,15440853-15441134
Length = 555
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 674 RYGSGLGCYHPTGPAGSKP*PVGLPPACRPALPTTCAPKLKPI 546
R + + H P SK PVG+P A + + P+ AP+ P+
Sbjct: 33 RRATAVRAVHAAEP--SKNPPVGVPSAAKTSSPSVAAPEKAPV 73
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,448,560
Number of Sequences: 37544
Number of extensions: 492597
Number of successful extensions: 1953
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1951
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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