Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0888
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    30   0.079
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    25   3.0  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   3.9  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.8  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   6.8  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   9.0  
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           23   9.0  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 29.9 bits (64), Expect = 0.079
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 644 PTGPAGSKP*PVGLPPACRPALPTTCAPKLKP 549
           P  P G  P P G+P   RP +P    P ++P
Sbjct: 211 PPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQP 242


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +1

Query: 196 TVQT--TNTGFSPDVTKTTIKFYKWQCQLYPELELQWKPAS 312
           TV+T  T T    +  K+T+  Y W    + + +L W PAS
Sbjct: 64  TVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPAS 104


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 438 PLARPRQSTTITLQSETASKAGRIMVFTAEFPL 340
           P A    +TT +     A+K G   +FTA+F L
Sbjct: 24  PSAAGTATTTTSPSHSNAAKMGSRRIFTAQFKL 56


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 129  GEGVPHLVDLEEPADEDILMSRNGANNQYWL 221
            G+    LV   EP     L+ RNG++ + WL
Sbjct: 1516 GQPFTELVPYVEPEQLFELLVRNGSSGERWL 1546


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 144 HLVDLEEPADEDILMSRNGANNQYWLFTRRNQNNHQVLQMAMSTLSGT 287
           H+  LE PA  DIL    G  N Y L   ++ N  ++L    +++  T
Sbjct: 100 HMNTLELPALRDILGGSVGFFNNYNLCHMKSINWEEILLAPQTSMQYT 147


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 148 SLTWKNRPTKTSLCQG 195
           SL WKN+P +  L +G
Sbjct: 86  SLLWKNKPVRELLFEG 101


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +3

Query: 393 PTATLLLWTGVVLPTVYTTLPSMEFPVSDSSLATFWSGSQQRRRQLGSSPL 545
           PT T+   T  V PT  T  P+    V+ ++  T   G Q     + S P+
Sbjct: 25  PTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPG-QTTTTTVASGPV 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 791,471
Number of Sequences: 2352
Number of extensions: 17965
Number of successful extensions: 59
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)