Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0887
(581 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 131 5e-31
02_04_0017 + 18937774-18937864,18938505-18940945 131 5e-31
01_06_0662 + 30987187-30987277,30987825-30990214 130 6e-31
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 108 3e-24
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 107 6e-24
03_05_0511 + 25056018-25059107 78 4e-15
02_04_0148 - 20198407-20201424 76 2e-14
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 49 3e-06
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 45 4e-05
07_03_1279 + 25415971-25416540 32 0.38
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 30 1.2
01_06_0956 - 33343503-33344086,33344225-33344384 30 1.5
03_06_0137 - 31937541-31939892 29 2.0
05_04_0347 + 20479682-20479753,20480136-20480813,20481143-204821... 27 8.2
03_05_1048 - 29950860-29951396,29951810-29952676 27 8.2
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 131 bits (316), Expect = 5e-31
Identities = 59/85 (69%), Positives = 72/85 (84%)
Frame = +2
Query: 2 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 181
GGQ+IPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVFEE Q
Sbjct: 703 GGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRP 762
Query: 182 GTPMFIVKAYLPVNESFGFTADLRS 256
GTP++ +KAYLPV ESFGF++ LR+
Sbjct: 763 GTPLYNIKAYLPVIESFGFSSQLRA 787
Score = 54.8 bits (126), Expect = 5e-08
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = +1
Query: 259 TGGQAFPQCVFDHWQVLPGDPCEPHSKPYNVVQVTRKRKRLK 384
T GQAFPQCVFDHW ++ DP E S+ +V RKRK LK
Sbjct: 789 TSGQAFPQCVFDHWDMMTSDPLEVSSQANQLVLDIRKRKGLK 830
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 131 bits (316), Expect = 5e-31
Identities = 59/85 (69%), Positives = 72/85 (84%)
Frame = +2
Query: 2 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 181
GGQ+IPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVFEE Q
Sbjct: 703 GGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRP 762
Query: 182 GTPMFIVKAYLPVNESFGFTADLRS 256
GTP++ +KAYLPV ESFGF++ LR+
Sbjct: 763 GTPLYNIKAYLPVIESFGFSSQLRA 787
Score = 57.6 bits (133), Expect = 7e-09
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = +1
Query: 259 TGGQAFPQCVFDHWQVLPGDPCEPHSKPYNVVQVTRKRKRLK 384
T GQAFPQCVFDHW ++ DP E S+ +VQ RKRK LK
Sbjct: 789 TSGQAFPQCVFDHWDMMTSDPLEAGSQASTLVQDIRKRKGLK 830
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 130 bits (315), Expect = 6e-31
Identities = 60/85 (70%), Positives = 71/85 (83%)
Frame = +2
Query: 2 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 181
GGQIIPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIY VLN++RGHVFEE Q
Sbjct: 701 GGQIIPTARRVIYAAQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRP 760
Query: 182 GTPMFIVKAYLPVNESFGFTADLRS 256
GTP++ +KAYLPV ESFGFT+ LR+
Sbjct: 761 GTPLYNIKAYLPVIESFGFTSTLRA 785
Score = 41.1 bits (92), Expect = 6e-04
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 259 TGGQAFPQCVFDHWQVLPGDPCEPHSK 339
T GQAFP VFDHW++L DP EP ++
Sbjct: 787 TSGQAFPLFVFDHWEMLSVDPLEPGTR 813
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 108 bits (260), Expect = 3e-24
Identities = 52/84 (61%), Positives = 60/84 (71%)
Frame = +2
Query: 2 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 181
GGQIIPT RR +Y+ L A PRLMEPVY EIQ P V IY VL+RRRGHV +
Sbjct: 829 GGQIIPTARRVVYSAFLMANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVTADVPKP 888
Query: 182 GTPMFIVKAYLPVNESFGFTADLR 253
GTP+++VKA+LPV ESFGF DLR
Sbjct: 889 GTPIYVVKAFLPVIESFGFETDLR 912
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 253 FNTGGQAFPQCVFDHWQVLPGDPCE 327
++T GQAF VFDHW ++PGDP +
Sbjct: 913 YHTQGQAFCLSVFDHWAIVPGDPLD 937
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 107 bits (257), Expect = 6e-24
Identities = 49/85 (57%), Positives = 62/85 (72%)
Frame = +2
Query: 2 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 181
GGQ+IPT RR +YA LTA PRLMEP+Y +IQ P+ AVG +YGVLN R G + EES+
Sbjct: 713 GGQLIPTARRAMYAAQLTASPRLMEPMYQVDIQVPKTAVGNVYGVLNSRNGELVEESERT 772
Query: 182 GTPMFIVKAYLPVNESFGFTADLRS 256
GTP+ ++ YLPV +SF FT LR+
Sbjct: 773 GTPLSNLRFYLPVAKSFDFTEKLRA 797
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +1
Query: 259 TGGQAFPQCVFDHWQVLPGDPCEPHSKPYNVVQVTRKRKRLK 384
T GQAFPQC+F HWQ + DP + S+ V+ RKRK LK
Sbjct: 799 TSGQAFPQCIFHHWQTMRSDPFQEGSEAAKVITDIRKRKGLK 840
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 78.2 bits (184), Expect = 4e-15
Identities = 37/91 (40%), Positives = 52/91 (57%)
Frame = +2
Query: 5 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAG 184
GQ+I + ++ +PRL+E +Y CE+ P +G Y VL+R+R V +E G
Sbjct: 867 GQVITAVKEACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSRKRARVLKEEMQEG 926
Query: 185 TPMFIVKAYLPVNESFGFTADLRSTPADRPS 277
T +F V AYLPV ES GF+ +LRS A S
Sbjct: 927 TSLFTVHAYLPVAESVGFSNELRSVTAGAAS 957
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 75.8 bits (178), Expect = 2e-14
Identities = 38/91 (41%), Positives = 50/91 (54%)
Frame = +2
Query: 5 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAG 184
GQII R A +L ++PRL+EP+Y CE+ P +G +Y VL R V +E G
Sbjct: 843 GQIITAVREACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLKEEMQEG 902
Query: 185 TPMFIVKAYLPVNESFGFTADLRSTPADRPS 277
T +F V AYL V ES F+ LR+ A S
Sbjct: 903 TSLFTVHAYLSVAESSEFSKKLRNATAGAAS 933
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 48.8 bits (111), Expect = 3e-06
Identities = 28/77 (36%), Positives = 40/77 (51%)
Frame = +2
Query: 47 LLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNE 226
L A PRL+EP+ E+ PE +G + G LN RRG V G + +V A++P+ E
Sbjct: 644 LRKAGPRLLEPIMKVEVITPEEHLGDVIGDLNSRRGQVNSFGDKPG-GLKVVDAFVPLAE 702
Query: 227 SFGFTADLRSTPADRPS 277
F + + LR R S
Sbjct: 703 MFQYVSTLRGMTKGRAS 719
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/71 (30%), Positives = 38/71 (53%)
Frame = +2
Query: 44 CLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVN 223
C A+P ++EPV E++ P G + G +N+R+G + Q +V ++P+N
Sbjct: 665 CYAAARPVILEPVMKVELKVPTEFQGTVTGDMNKRKGIIVGNDQEGDDT--VVVCHVPLN 722
Query: 224 ESFGFTADLRS 256
FG++ LRS
Sbjct: 723 NMFGYSTALRS 733
>07_03_1279 + 25415971-25416540
Length = 189
Score = 31.9 bits (69), Expect = 0.38
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 107 EVAVGGIYGVLNRRRGHVFEESQVAG-TPMFIVKAYLPVNESFGFTADLRSTPADRPSRS 283
+VA G L R R ++ E A T + +V + L NE+FG A L D P R+
Sbjct: 28 DVAAAGGRDKLTRIRVYMHERFAGANATALAVVPSPLGANEAFGRVAVLDDELRDGPDRA 87
Query: 284 AYSTIGR 304
+ + IGR
Sbjct: 88 SSALIGR 94
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/61 (22%), Positives = 27/61 (44%)
Frame = +2
Query: 53 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 232
T +L EP + ++ PE +G + +L +RRG + + ++K +P
Sbjct: 497 TVDGKLQEPYEIAAVEVPEEYMGSVVELLGKRRGQMVDMQPSGPEGTTLLKYKIPTRGLI 556
Query: 233 G 235
G
Sbjct: 557 G 557
>01_06_0956 - 33343503-33344086,33344225-33344384
Length = 247
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 204 RPTYLSMSRSVLLPICVQHRRTGLPA-VRIRPLAGPPWRPVRTSQQALQRCTGNEKEET 377
RP + S LLP +H+R PA + + P P W P +R +G++K +
Sbjct: 121 RPAPATPSPPPLLPPSPRHKRRTAPAPMPLPPAQAPVWSPAPAPAATQRRHSGHKKHRS 179
>03_06_0137 - 31937541-31939892
Length = 783
Score = 29.5 bits (63), Expect = 2.0
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +2
Query: 17 PTTRRCLYACLLTAQPRLMEPVYLCE--IQCPEVAVGGIYGVLNRRRGHVFEESQVAGTP 190
P R ++A + A L+ YLC + GG G+ + RR +F+E +A
Sbjct: 21 PGAGRAIHARAVKAG--LLASAYLCNNLLSYYGETAGGAGGLRDARR--LFDEIPLARRN 76
Query: 191 MFIVKAYLPVNESFGFTADLRSTPADRPSRSAYS 292
+F + L + G AD R A+ P R A S
Sbjct: 77 VFTWNSLLSMFAKSGRLADARGVFAEMPERDAVS 110
>05_04_0347 +
20479682-20479753,20480136-20480813,20481143-20482195,
20482345-20482406,20482491-20482541,20482635-20482719,
20483253-20483342,20483472-20483563,20483704-20483728
Length = 735
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 242 ADLRSTPADRPSRSAYSTIGRSSLETRANLTAS--PTTLYR*RERGN 376
AD+ TPA RPS S + R + +N T S P T R RG+
Sbjct: 503 ADVTLTPARRPSTSERRPVTRETALRHSNFTGSCWPLTPQRHISRGS 549
>03_05_1048 - 29950860-29951396,29951810-29952676
Length = 467
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 32 CLYACLLTAQPRLMEPVYLCEIQCPEVAVG 121
C C+LTA PR+M +L E ++ VG
Sbjct: 77 CGRRCVLTANPRMMVEAFLKEYLGADIVVG 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,914,537
Number of Sequences: 37544
Number of extensions: 340582
Number of successful extensions: 792
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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