Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0887
         (581 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   2.4  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   3.1  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    24   3.1  
AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione S-tran...    24   4.1  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    23   5.5  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   9.5  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 178 GRYTYVHCEGLPTC 219
           GRYT  +CE  PTC
Sbjct: 664 GRYTGRYCEKCPTC 677


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = +1

Query: 202  EGLPTCQ*VVRFYCRFAFNTGGQAFPQCVFDHWQVLPGDPCE 327
            +G+  C   +   C    N  G+   +C   +W ++ G+ CE
Sbjct: 897  KGISICD-AINGNCHCKPNVIGRTCNECKNGYWNIVSGNGCE 937


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 267 TGLPAVRIRPLAGPPWRPVRTSQQALQRCTGNEKEETIE 383
           +G+P +R    AG     V  + + LQR    EKEE ++
Sbjct: 27  SGIPTLRAPMAAGNAGSVVSKTVEDLQRSLAAEKEEKMK 65


>AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione
           S-transferase S1-2 protein.
          Length = 195

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 381 QSFPLSRYLYNVVGLA 334
           QS  +SRYL N VGLA
Sbjct: 55  QSVAMSRYLANQVGLA 70


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 301 QVLPGDPCEPHSKPYNVVQVTR 366
           +VLP DP E H K  N   + R
Sbjct: 69  EVLPTDPLELHEKLENETDIPR 90


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 170 TLRKRDHDVCSVHRRYHP 117
           T+ +  H+ CS H R HP
Sbjct: 385 TVGQWKHEGCSSHERLHP 402


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,632
Number of Sequences: 2352
Number of extensions: 14373
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)