Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0887
         (581 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15805-1|CAA33804.1|  844|Drosophila melanogaster protein ( Dros...   173   1e-43
AY075481-1|AAL68292.1|  844|Drosophila melanogaster RE38659p pro...   173   1e-43
AE014134-3534|AAN11135.1|  832|Drosophila melanogaster CG2238-PC...   173   1e-43
AE014134-3533|AAG22125.2|  832|Drosophila melanogaster CG2238-PB...   173   1e-43
AE014134-3532|AAF57226.2|  844|Drosophila melanogaster CG2238-PA...   173   1e-43
AY089551-1|AAL90289.1|  975|Drosophila melanogaster LD28793p pro...   100   1e-21
AE014297-4212|AAF56769.1|  975|Drosophila melanogaster CG4849-PA...   100   1e-21
AY058769-1|AAL13998.1|  949|Drosophila melanogaster SD04694p pro...    51   1e-06
AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-P...    51   1e-06
AE014134-1251|AAF52495.2|  745|Drosophila melanogaster CG4567-PA...    46   4e-05
AE014297-3196|AAF56031.2|  692|Drosophila melanogaster CG31159-P...    40   0.003
AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire pro...    30   2.6  
AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-P...    30   2.6  

>X15805-1|CAA33804.1|  844|Drosophila melanogaster protein (
           Drosophila DMEF2 genefor the translation elongation
           factor 2. ).
          Length = 844

 Score =  173 bits (421), Expect = 1e-43
 Identities = 78/85 (91%), Positives = 82/85 (96%)
 Frame = +2

Query: 2   GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 181
           GGQIIPTTRRCLYA  +TA+PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE+QV 
Sbjct: 704 GGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVV 763

Query: 182 GTPMFIVKAYLPVNESFGFTADLRS 256
           GTPMF+VKAYLPVNESFGFTADLRS
Sbjct: 764 GTPMFVVKAYLPVNESFGFTADLRS 788



 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 40/47 (85%), Positives = 41/47 (87%)
 Frame = +1

Query: 256 NTGGQAFPQCVFDHWQVLPGDPCEPHSKPYNVVQVTRKRKRLKVGLP 396
           NTGGQAFPQCVFDHWQVLPGDP EP SKPY +VQ TRKRK LK GLP
Sbjct: 789 NTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 835


>AY075481-1|AAL68292.1|  844|Drosophila melanogaster RE38659p
           protein.
          Length = 844

 Score =  173 bits (421), Expect = 1e-43
 Identities = 78/85 (91%), Positives = 82/85 (96%)
 Frame = +2

Query: 2   GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 181
           GGQIIPTTRRCLYA  +TA+PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE+QV 
Sbjct: 704 GGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVV 763

Query: 182 GTPMFIVKAYLPVNESFGFTADLRS 256
           GTPMF+VKAYLPVNESFGFTADLRS
Sbjct: 764 GTPMFVVKAYLPVNESFGFTADLRS 788



 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 40/47 (85%), Positives = 41/47 (87%)
 Frame = +1

Query: 256 NTGGQAFPQCVFDHWQVLPGDPCEPHSKPYNVVQVTRKRKRLKVGLP 396
           NTGGQAFPQCVFDHWQVLPGDP EP SKPY +VQ TRKRK LK GLP
Sbjct: 789 NTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 835


>AE014134-3534|AAN11135.1|  832|Drosophila melanogaster CG2238-PC,
           isoform C protein.
          Length = 832

 Score =  173 bits (421), Expect = 1e-43
 Identities = 78/85 (91%), Positives = 82/85 (96%)
 Frame = +2

Query: 2   GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 181
           GGQIIPTTRRCLYA  +TA+PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE+QV 
Sbjct: 692 GGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVV 751

Query: 182 GTPMFIVKAYLPVNESFGFTADLRS 256
           GTPMF+VKAYLPVNESFGFTADLRS
Sbjct: 752 GTPMFVVKAYLPVNESFGFTADLRS 776



 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 40/47 (85%), Positives = 41/47 (87%)
 Frame = +1

Query: 256 NTGGQAFPQCVFDHWQVLPGDPCEPHSKPYNVVQVTRKRKRLKVGLP 396
           NTGGQAFPQCVFDHWQVLPGDP EP SKPY +VQ TRKRK LK GLP
Sbjct: 777 NTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 823


>AE014134-3533|AAG22125.2|  832|Drosophila melanogaster CG2238-PB,
           isoform B protein.
          Length = 832

 Score =  173 bits (421), Expect = 1e-43
 Identities = 78/85 (91%), Positives = 82/85 (96%)
 Frame = +2

Query: 2   GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 181
           GGQIIPTTRRCLYA  +TA+PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE+QV 
Sbjct: 692 GGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVV 751

Query: 182 GTPMFIVKAYLPVNESFGFTADLRS 256
           GTPMF+VKAYLPVNESFGFTADLRS
Sbjct: 752 GTPMFVVKAYLPVNESFGFTADLRS 776



 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 40/47 (85%), Positives = 41/47 (87%)
 Frame = +1

Query: 256 NTGGQAFPQCVFDHWQVLPGDPCEPHSKPYNVVQVTRKRKRLKVGLP 396
           NTGGQAFPQCVFDHWQVLPGDP EP SKPY +VQ TRKRK LK GLP
Sbjct: 777 NTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 823


>AE014134-3532|AAF57226.2|  844|Drosophila melanogaster CG2238-PA,
           isoform A protein.
          Length = 844

 Score =  173 bits (421), Expect = 1e-43
 Identities = 78/85 (91%), Positives = 82/85 (96%)
 Frame = +2

Query: 2   GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 181
           GGQIIPTTRRCLYA  +TA+PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEE+QV 
Sbjct: 704 GGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVV 763

Query: 182 GTPMFIVKAYLPVNESFGFTADLRS 256
           GTPMF+VKAYLPVNESFGFTADLRS
Sbjct: 764 GTPMFVVKAYLPVNESFGFTADLRS 788



 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 40/47 (85%), Positives = 41/47 (87%)
 Frame = +1

Query: 256 NTGGQAFPQCVFDHWQVLPGDPCEPHSKPYNVVQVTRKRKRLKVGLP 396
           NTGGQAFPQCVFDHWQVLPGDP EP SKPY +VQ TRKRK LK GLP
Sbjct: 789 NTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLP 835


>AY089551-1|AAL90289.1|  975|Drosophila melanogaster LD28793p protein.
          Length = 975

 Score =  100 bits (240), Expect = 1e-21
 Identities = 44/85 (51%), Positives = 59/85 (69%)
 Frame = +2

Query: 2    GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 181
            GGQIIPT RR  Y+  L A PRLMEP    E+Q P   V  +Y VL RRRGHV +++ V+
Sbjct: 808  GGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQDAPVS 867

Query: 182  GTPMFIVKAYLPVNESFGFTADLRS 256
            G+P++ +KA++P  +SFGF  DLR+
Sbjct: 868  GSPIYTIKAFIPAIDSFGFETDLRT 892



 Score = 37.5 bits (83), Expect = 0.013
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +1

Query: 256 NTGGQAFPQCVFDHWQVLPGDPCE 327
           +T GQAF   VF HWQ++PGDP +
Sbjct: 893 HTQGQAFCLSVFHHWQIVPGDPLD 916


>AE014297-4212|AAF56769.1|  975|Drosophila melanogaster CG4849-PA
            protein.
          Length = 975

 Score =  100 bits (240), Expect = 1e-21
 Identities = 44/85 (51%), Positives = 59/85 (69%)
 Frame = +2

Query: 2    GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 181
            GGQIIPT RR  Y+  L A PRLMEP    E+Q P   V  +Y VL RRRGHV +++ V+
Sbjct: 808  GGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQDAPVS 867

Query: 182  GTPMFIVKAYLPVNESFGFTADLRS 256
            G+P++ +KA++P  +SFGF  DLR+
Sbjct: 868  GSPIYTIKAFIPAIDSFGFETDLRT 892



 Score = 37.5 bits (83), Expect = 0.013
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +1

Query: 256 NTGGQAFPQCVFDHWQVLPGDPCE 327
           +T GQAF   VF HWQ++PGDP +
Sbjct: 893 HTQGQAFCLSVFHHWQIVPGDPLD 916


>AY058769-1|AAL13998.1|  949|Drosophila melanogaster SD04694p protein.
          Length = 949

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 25/83 (30%), Positives = 37/83 (44%)
 Frame = +2

Query: 5    GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAG 184
            GQ++   +            RL+ P+Y C I      +G +Y V+ RR G +       G
Sbjct: 788  GQVLTAAKEVCRQAFQNQPQRLVTPMYSCNIVVNAEMLGKMYAVIGRRHGKILSGDLTQG 847

Query: 185  TPMFIVKAYLPVNESFGFTADLR 253
            +  F V   LPV ESF F  ++R
Sbjct: 848  SGNFAVTCLLPVIESFNFAQEMR 870



 Score = 29.9 bits (64), Expect = 2.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 259 TGGQAFPQCVFDHWQVLPGDP 321
           T G A PQ +F HW+V+  DP
Sbjct: 873 TSGLACPQLMFSHWEVIDIDP 893


>AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-PB
            protein.
          Length = 1033

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 25/83 (30%), Positives = 37/83 (44%)
 Frame = +2

Query: 5    GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAG 184
            GQ++   +            RL+ P+Y C I      +G +Y V+ RR G +       G
Sbjct: 872  GQVLTAAKEVCRQAFQNQPQRLVTPMYSCNIVVNAEMLGKMYAVIGRRHGKILSGDLTQG 931

Query: 185  TPMFIVKAYLPVNESFGFTADLR 253
            +  F V   LPV ESF F  ++R
Sbjct: 932  SGNFAVTCLLPVIESFNFAQEMR 954



 Score = 29.9 bits (64), Expect = 2.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 259  TGGQAFPQCVFDHWQVLPGDP 321
            T G A PQ +F HW+V+  DP
Sbjct: 957  TSGLACPQLMFSHWEVIDIDP 977


>AE014134-1251|AAF52495.2|  745|Drosophila melanogaster CG4567-PA
           protein.
          Length = 745

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 22/65 (33%), Positives = 37/65 (56%)
 Frame = +2

Query: 65  RLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTA 244
           +++EP+ L E+  PE   G + G L++R G +       G   F V A +P+N+ FG+  
Sbjct: 638 QILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEG--WFTVYAEVPLNDMFGYAG 695

Query: 245 DLRST 259
           +LRS+
Sbjct: 696 ELRSS 700


>AE014297-3196|AAF56031.2|  692|Drosophila melanogaster CG31159-PA
           protein.
          Length = 692

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 22/82 (26%), Positives = 41/82 (50%)
 Frame = +2

Query: 11  IIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTP 190
           ++ T  +C+   L T+  RL+EP+   +I  P   + GI   L+RRR  +  +    G  
Sbjct: 578 VMATAAQCVQKLLSTSGTRLLEPIMALQIVAPSERISGIMADLSRRRA-LINDVLPKGER 636

Query: 191 MFIVKAYLPVNESFGFTADLRS 256
             ++    P+ E  G+++ LR+
Sbjct: 637 NKMILVNAPLAELSGYSSALRT 658


>AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire protein.
          Length = 5233

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 22/60 (36%), Positives = 25/60 (41%)
 Frame = +2

Query: 170  SQVAGTPMFIVKAYLPVNESFGFTADLRSTPADRPSRSAYSTIGRSSLETRANLTASPTT 349
            SQ    P F + +    N S   TA L STP   P RSA      S LE   +L    TT
Sbjct: 3289 SQQEQDPEFSLASMRRPNYSASQTAALLSTPKHTPKRSAVVASETSGLEDELSLLQITTT 3348


>AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-PA
            protein.
          Length = 5233

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 22/60 (36%), Positives = 25/60 (41%)
 Frame = +2

Query: 170  SQVAGTPMFIVKAYLPVNESFGFTADLRSTPADRPSRSAYSTIGRSSLETRANLTASPTT 349
            SQ    P F + +    N S   TA L STP   P RSA      S LE   +L    TT
Sbjct: 3289 SQQEQDPEFSLASMRRPNYSASQTAALLSTPKHTPKRSAVVASETSGLEDELSLLQITTT 3348


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,675,392
Number of Sequences: 53049
Number of extensions: 576161
Number of successful extensions: 1520
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1519
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)