Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0887
         (581 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   6.7  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   6.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   6.7  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   6.7  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = -1

Query: 302 CQWSNTHCGKACPPVLNAN 246
           CQ  N HC   C P    N
Sbjct: 36  CQAVNGHCSHLCLPAPRIN 54


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = -1

Query: 302 CQWSNTHCGKACPPVLNAN 246
           CQ  N HC   C P    N
Sbjct: 36  CQAVNGHCSHLCLPAPRIN 54


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 183 VHLCSL*RPTYLSMSRSVLLPICVQHRRTGL 275
           ++LC++    YL+++R V  P  +  RR  L
Sbjct: 154 LNLCAISLDRYLAVTRPVSYPQIMSPRRARL 184


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 113 AVGGIYGVLNRRR 151
           A GGIY + N+RR
Sbjct: 317 AEGGIYDISNKRR 329


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,549
Number of Sequences: 438
Number of extensions: 3447
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)