Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0870
         (582 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0TW72 Cluster: Putative uncharacterized protein; n=1; ...    34   2.8  
UniRef50_Q55MV5 Cluster: Putative uncharacterized protein; n=2; ...    33   3.7  
UniRef50_Q8NJX4 Cluster: Cytokinesis protein Don1; n=2; Ustilago...    33   4.9  
UniRef50_Q6C2Z5 Cluster: Similarity; n=1; Yarrowia lipolytica|Re...    33   6.5  

>UniRef50_Q0TW72 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 649

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
 Frame = +2

Query: 332 ISLLNKTDYEGIPDDAELQSDISPTSVAS----EAAKFRRKNMTRAASESKLMPKPAKIG 499
           + LL++ +Y G  D A LQ  I P           A+     +T++   +K     A++G
Sbjct: 530 VRLLHQLNYVG-DDAALLQPSIDPDGKIKLTHVPTAEMAADGLTKSPDTTKHAAWVAQVG 588

Query: 500 RRIPLTLIITQSWDPRWRQSAG 565
            R+PL   I +S  P W + AG
Sbjct: 589 MRLPLLPAIERSHCPAWPRQAG 610


>UniRef50_Q55MV5 Cluster: Putative uncharacterized protein; n=2;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 676

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +3

Query: 24  SNKSKA-SEDLDKAGQGRRTRKSVVATKPELSVIPEAAVEESKEGSAIIDELSKSRRMTR 200
           +NK KA S+        R +R+  V  +PE     EAA EE +EG A  +E  +    TR
Sbjct: 306 TNKRKAVSQPKGAPPTKRNSRRGAVTEEPEEFEAGEAAEEEEEEGGA--EEKEEEPPTTR 363

Query: 201 GQQTALSTL 227
           G+++  S+L
Sbjct: 364 GRRSKRSSL 372


>UniRef50_Q8NJX4 Cluster: Cytokinesis protein Don1; n=2; Ustilago
           maydis|Rep: Cytokinesis protein Don1 - Ustilago maydis
           (Smut fungus)
          Length = 1332

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 16/61 (26%), Positives = 33/61 (54%)
 Frame = +2

Query: 329 RISLLNKTDYEGIPDDAELQSDISPTSVASEAAKFRRKNMTRAASESKLMPKPAKIGRRI 508
           RIS+ + + +E +P+D  +Q  ++P ++  ++       +TR+A+ S L  K   +  R 
Sbjct: 200 RISVASVSSFESLPEDEIVQGFLAPGAIQPKSRALSYDRITRSAAISPLNTKDDHLRSRT 259

Query: 509 P 511
           P
Sbjct: 260 P 260


>UniRef50_Q6C2Z5 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
           Similarity - Yarrowia lipolytica (Candida lipolytica)
          Length = 682

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = +3

Query: 15  SFVSNKSKASEDLDKAGQGRRTRKSVVATKPELSVIPEAAVEESKEGSAIIDELS 179
           S+ S+ S    DL+   +   +  S+VATKP+ S+  E   +ES++G    D ++
Sbjct: 140 SYTSHVSGLKIDLNTDQRASNSTGSLVATKPKSSLCNEVVPDESRDGEETSDNVN 194


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,039,725
Number of Sequences: 1657284
Number of extensions: 8170310
Number of successful extensions: 25596
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25588
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)