Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0870
(582 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 26 0.31
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 25 0.72
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 25 0.72
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 24 0.95
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 3.8
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 5.1
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 5.1
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 5.1
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 5.1
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 21 6.7
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 6.7
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 6.7
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 25.8 bits (54), Expect = 0.31
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 506 IPLTLIITQSWDPRWRQSAGVPAR 577
IP LI+ SW W + +PAR
Sbjct: 222 IPSALIVVMSWIAFWIKPEAIPAR 245
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 24.6 bits (51), Expect = 0.72
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 506 IPLTLIITQSWDPRWRQSAGVPAR 577
IP +++ SW W + VPAR
Sbjct: 250 IPCCMLVIVSWVSFWLDQSAVPAR 273
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 24.6 bits (51), Expect = 0.72
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 506 IPLTLIITQSWDPRWRQSAGVPAR 577
IP +++ SW W + VPAR
Sbjct: 250 IPCCMLVIVSWVSFWLDQSAVPAR 273
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.2 bits (50), Expect = 0.95
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 506 IPLTLIITQSWDPRWRQSAGVPAR 577
IP LI+ SW W + PAR
Sbjct: 253 IPTCLIVIMSWVSFWIKPEAAPAR 276
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.2 bits (45), Expect = 3.8
Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Frame = +2
Query: 368 PDDAELQSDISPTSVASEAAKFRRKNMTRAASESKLMPKPAKIGRRI-----PLTLIITQ 532
P+ LQ DI VA E + + + +IG + P TL++
Sbjct: 157 PELKLLQYDIGKPVVAEETVDYMLEKSGNFSRLVVFFRFERQIGHHLIQTFAPSTLVVML 216
Query: 533 SWDPRWRQSAGVPAR 577
SW W +P R
Sbjct: 217 SWFSFWLGLDAIPGR 231
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 5.1
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 506 IPLTLIITQSWDPRWRQSAGVPAR 577
IP LI+ SW W PAR
Sbjct: 229 IPSGLIVIISWVSFWLNRNATPAR 252
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 5.1
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 506 IPLTLIITQSWDPRWRQSAGVPAR 577
IP LI+ SW W PAR
Sbjct: 229 IPSGLIVIISWVSFWLNRNATPAR 252
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 208 KQPCRRYWRSGPPPEP 255
+QP R Y R PP+P
Sbjct: 241 QQPERHYERRATPPQP 256
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 5.1
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 506 IPLTLIITQSWDPRWRQSAGVPAR 577
IP LI+ SW W PAR
Sbjct: 168 IPSGLIVIISWVSFWLNRNATPAR 191
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.4 bits (43), Expect = 6.7
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 527 TQSWDPRWRQ 556
T+ W P+WRQ
Sbjct: 419 TEVWIPKWRQ 428
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.4 bits (43), Expect = 6.7
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -2
Query: 578 PGPELPLTDATGDPNSELLSMSTVSVCLFWPVL 480
P LP+ D T N ++ + + V L P+L
Sbjct: 92 PWSTLPIEDLTKSDNEDITYPTVLEVQLNLPIL 124
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.4 bits (43), Expect = 6.7
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -2
Query: 578 PGPELPLTDATGDPNSELLSMSTVSVCLFWPVL 480
P LP+ D T N ++ + + V L P+L
Sbjct: 130 PWSTLPIEDLTKSDNEDITYPTVLEVQLNLPIL 162
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,759
Number of Sequences: 438
Number of extensions: 2199
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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