Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0869
         (587 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   5.5  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   9.7  
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    23   9.7  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 354  KNALRGAFTN*RFTKVKPTPPPVRRT 277
            +NA R A T  R  +  P PPP  RT
Sbjct: 1062 RNAARRAATQQRQAERLPPPPPSPRT 1087


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 460 IFLINNSRIYYEASLSFFRTVNYCGNI 540
           I L NN+   +E +L+   T+NY G +
Sbjct: 110 IVLYNNADGNFEVTLATKATLNYTGRV 136


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 319 SSVCERAAKSIFFYRTNLGTLK 384
           + VCERA +S   Y  + G L+
Sbjct: 130 TDVCERAHRSFLCYHQHYGYLR 151


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,728
Number of Sequences: 2352
Number of extensions: 9295
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)