Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0868
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    27   0.19 
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    27   0.19 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   4.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   9.3  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.3  

>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 27  VLTAIVAVSTNEVADPRSTDRANALSIGSITSSDRLLRSFV 149
           VL   VAV +   A  + T + + + +  I  SDRLL+++V
Sbjct: 5   VLVLFVAVLSVVFAADKYTTKYDNIDLNQILKSDRLLKNYV 45


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 27  VLTAIVAVSTNEVADPRSTDRANALSIGSITSSDRLLRSFV 149
           VL   VAV +   A  + T + + + +  I  SDRLL+++V
Sbjct: 5   VLVLFVAVVSVVFAADKYTTKYDNIDLNQILKSDRLLKNYV 45


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 310 CERAAKSIFFYRTNLGTLKCIFWTFTCKYTKF 405
           C++ +   F   T LGT   I+    CK  +F
Sbjct: 41  CDKISAICFLLSTILGTCWIIYVRIYCKEIRF 72


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
 Frame = +1

Query: 334 FFYRTNLGTLKCIFWTFTCK--YTKFLFF--CLHKKFVLPIFFN**FAYLLRSFLVF 492
           +FY   +  L C+++ +     +T  L F  C++  FV+P+FF     Y   +F++F
Sbjct: 102 YFYYAFI-ILLCVYYFYYAFIIFTVHLLFLLCIYY-FVVPLFFLLCIYYFYCAFIIF 156


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 379 TFTCKYTKFLFFCLHKKFVLPI 444
           +F   Y +FL+ C H   +L I
Sbjct: 136 SFIENYCQFLYNCFHSTLLLMI 157


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 291 VKPTPPPVRRTLGTVSILGRG 229
           +K TPPP     G  + +G G
Sbjct: 34  LKTTPPPEEDNRGCAASVGEG 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,039
Number of Sequences: 336
Number of extensions: 2826
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)