Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0864
         (714 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ...    35   0.047
At3g19920.1 68416.m02522 expressed protein                             29   4.0  
At1g03530.1 68414.m00334 expressed protein similar to hypothetic...    28   7.1  
At2g26660.1 68415.m03198 SPX (SYG1/Pho81/XPR1) domain-containing...    27   9.3  
At1g28420.1 68414.m03494 homeobox transcription factor, putative...    27   9.3  

>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 35.1 bits (77), Expect = 0.047
 Identities = 15/59 (25%), Positives = 36/59 (61%)
 Frame = +2

Query: 245 SLGPQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLAGHTSDLKR 421
           +L  +K + E++  +H   +KN+D+     +  +IE EF+++Q + I+ ++ + + L+R
Sbjct: 188 ALSLEKLVNEKLLNLHSVASKNNDV----HLADFIESEFLTEQVEAIKLISEYVAQLRR 242


>At3g19920.1 68416.m02522 expressed protein 
          Length = 416

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -3

Query: 445 FPVVLGYEPLEVRGVTREATNRIGLLTHEFLL-DVLSDLSI 326
           FPV+ GYE +EV     +A + +  L  E LL + L D S+
Sbjct: 352 FPVLTGYERVEVERAIDKAISTLPALDQEILLTNWLQDFSV 392


>At1g03530.1 68414.m00334 expressed protein similar to hypothetical
           protein GB:O14360
          Length = 797

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +3

Query: 156 MDFSSHTTLKGDKGSNYTVEVGHEIGALAKALDRRSSLPRGFSSSTGKSLKTATSS 323
           MD       K D+G   ++EVG E  +LA   D +S   +G   S     +T++SS
Sbjct: 200 MDLDESGLKKTDEGLACSIEVGLEKVSLAVDDDEKSDEAKGEMDSAESESETSSSS 255


>At2g26660.1 68415.m03198 SPX (SYG1/Pho81/XPR1) domain-containing
           protein low similarity to NUC-2 [Neurospora crassa]
           GI:1399532, xenotropic and polytropic murine leukemia
           virus receptor [Mus musculus castaneus] GI:6093320;
           contains Pfam profile PF03105: SPX domain
          Length = 287

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +3

Query: 90  LSDDSWEKTIGLIKHVTK 143
           L DDSW+K +G+++ V K
Sbjct: 270 LEDDSWKKKVGVLEQVAK 287


>At1g28420.1 68414.m03494 homeobox transcription factor, putative
            similar to homeobox transcription factor Hox7 GI:19486
            [Lycopersicon peruvianum]
          Length = 1703

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +2

Query: 227  DRSPGQSLGPQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQA-DTIRSLAGH 403
            DR P Q L   K L +    +H+   + + +  DA I+Q   E + S+++   ++S  GH
Sbjct: 1033 DRDPSQLLDETKPLEDLSNDLHKSSAERALINQDANISQ---ENYASKRSRSQLKSYIGH 1089

Query: 404  TSD 412
             ++
Sbjct: 1090 KAE 1092


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,829,996
Number of Sequences: 28952
Number of extensions: 263679
Number of successful extensions: 670
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)