Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0862
(388 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 168 4e-41
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 152 2e-36
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 145 3e-34
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 141 4e-33
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 127 6e-29
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 126 2e-28
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 111 6e-24
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 105 2e-22
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 105 2e-22
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 105 4e-22
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 102 3e-21
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 97 1e-19
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 88 5e-17
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 87 1e-16
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 86 3e-16
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 85 3e-16
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 85 3e-16
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 85 3e-16
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 84 1e-15
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 83 1e-15
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 83 2e-15
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 81 6e-15
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 79 3e-14
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 77 9e-14
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 76 3e-13
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 74 8e-13
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 71 6e-12
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 71 8e-12
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 69 4e-11
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 63 2e-09
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 62 5e-09
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 57 1e-07
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 52 4e-06
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 52 5e-06
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 51 7e-06
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 51 9e-06
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 50 2e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 49 4e-05
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 47 1e-04
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 46 3e-04
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 46 3e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 45 4e-04
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 44 8e-04
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 8e-04
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 44 8e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 44 0.001
UniRef50_UPI0000D998E5 Cluster: PREDICTED: similar to 40S riboso... 44 0.001
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 42 0.004
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 42 0.005
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 41 0.010
UniRef50_A2XN57 Cluster: Putative uncharacterized protein; n=1; ... 40 0.013
UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S riboso... 40 0.017
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 40 0.022
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 39 0.038
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 39 0.038
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 39 0.038
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 38 0.089
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 38 0.089
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 38 0.089
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 37 0.12
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 36 0.21
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 36 0.21
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 36 0.21
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 36 0.27
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 36 0.36
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 36 0.36
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 35 0.47
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 35 0.63
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 35 0.63
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 33 1.4
UniRef50_A3P1D4 Cluster: Type V secretory pathway, adhesin AidA;... 33 1.4
UniRef50_A2AKP6 Cluster: Novel protein; n=12; Murinae|Rep: Novel... 33 1.9
UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1; ... 33 1.9
UniRef50_Q9YEM4 Cluster: Putative methyltransferase; n=1; Aeropy... 33 2.5
UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1; ... 32 3.3
UniRef50_A3M596 Cluster: Cobalamin-5-phosphate synthase CobS; n=... 32 3.3
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 32 3.3
UniRef50_UPI0000ECBC19 Cluster: UPI0000ECBC19 related cluster; n... 32 4.4
UniRef50_Q6TEI0 Cluster: Type I polyketide synthase; n=1; Strept... 32 4.4
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 31 5.8
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 31 5.8
UniRef50_A5NS12 Cluster: Putative uncharacterized protein precur... 31 7.7
UniRef50_A1ART0 Cluster: Fibronectin, type III domain protein pr... 31 7.7
UniRef50_Q38AQ9 Cluster: Putative uncharacterized protein; n=1; ... 31 7.7
UniRef50_A4QUU0 Cluster: Putative uncharacterized protein; n=2; ... 31 7.7
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 168 bits (408), Expect = 4e-41
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +2
Query: 2 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 181
LAKLS++PVRRGYWGNKIGKPHTVPCKVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL M
Sbjct: 157 LAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMM 216
Query: 182 AGVQDCYTSARGSTGTLGNFAKAT 253
AG+ DCYTSARG T TLGNFAKAT
Sbjct: 217 AGIDDCYTSARGCTATLGNFAKAT 240
Score = 52.4 bits (120), Expect = 3e-06
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +1
Query: 229 LGKFC*SHIAAIAKTYAYLTPDLWRDIPLTKSPYSEF 339
LG F + AI+KTY+YLTPDLW++ TKSPY EF
Sbjct: 233 LGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEF 269
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 152 bits (369), Expect = 2e-36
Identities = 68/84 (80%), Positives = 76/84 (90%)
Frame = +2
Query: 2 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 181
LAKLS++P+R+GYWGNKIGKP+TVPCKVTG CGSV V LIPAPRGTG+VSAPVPKKLL M
Sbjct: 101 LAKLSIVPLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMM 160
Query: 182 AGVQDCYTSARGSTGTLGNFAKAT 253
AG+ DCYTSAR T +LGNFAKAT
Sbjct: 161 AGIDDCYTSARDCTASLGNFAKAT 184
Score = 50.4 bits (115), Expect = 1e-05
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +1
Query: 229 LGKFC*SHIAAIAKTYAYLTPDLWRDIPLTKSPYSEF 339
LG F + I+KTY YLTPDLW++ TKSPY EF
Sbjct: 177 LGNFAKATFDTISKTYTYLTPDLWKETVFTKSPYEEF 213
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 145 bits (351), Expect = 3e-34
Identities = 69/100 (69%), Positives = 75/100 (75%)
Frame = +2
Query: 2 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 181
LAKLS+LPV RGYWGN+I KPHTVP KVTG+CGSV VRLIPAPRGTG VSAPVPKKLL M
Sbjct: 97 LAKLSILPVPRGYWGNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMM 156
Query: 182 AGVQDCYTSARGSTGTLGNFAKATSLPLPRHMPTSLLTCG 301
AG+ DCYTSARG T T G + + PR S L G
Sbjct: 157 AGIDDCYTSARGHTATWGTLPRLLLMRSPRPTAISPLISG 196
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 141 bits (342), Expect = 4e-33
Identities = 58/83 (69%), Positives = 72/83 (86%)
Frame = +2
Query: 2 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 181
+ KLS++P+RRGYWG +G PHTVP KV+GKCGSVTVRL+PAPRG G+V+APV K+ LQ+
Sbjct: 130 MGKLSIMPIRRGYWGTALGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQL 189
Query: 182 AGVQDCYTSARGSTGTLGNFAKA 250
AG++DCYT +RGST TLGNF KA
Sbjct: 190 AGIEDCYTQSRGSTKTLGNFVKA 212
Score = 35.5 bits (78), Expect = 0.36
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 229 LGKFC*SHIAAIAKTYAYLTPDLWRDIPLTKSPYSEF 339
LG F + AA + TY LTP+LW + P ++P E+
Sbjct: 206 LGNFVKAAFAAASLTYGILTPNLWAERPFGQTPIEEY 242
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 127 bits (307), Expect = 6e-29
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +2
Query: 2 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 181
LAKL+++PVRRGYWG+K+G+PHT+P KV GKCGSV VRLIPAPRG GIV++ KK+L M
Sbjct: 147 LAKLNIVPVRRGYWGSKLGEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAM 206
Query: 182 AGVQDCYTSARGSTGTLGNFAKAT 253
AG+ D YT +RG T TLGN KAT
Sbjct: 207 AGLHDVYTCSRGHTRTLGNSVKAT 230
Score = 32.7 bits (71), Expect = 2.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 259 AIAKTYAYLTPDLWRDIPLTKSPYSEF 339
A+ +Y +LTPDLW + K P EF
Sbjct: 233 ALKNSYGFLTPDLWAETRFAKPPAQEF 259
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 126 bits (303), Expect = 2e-28
Identities = 55/83 (66%), Positives = 68/83 (81%)
Frame = +2
Query: 2 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 181
+AKLSV+P+RRGYWG +G+PH++ K TGKCGSVTVRLIPAPRG+GIV++P KKLLQ+
Sbjct: 131 IAKLSVIPIRRGYWGTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQL 190
Query: 182 AGVQDCYTSARGSTGTLGNFAKA 250
AGV+D YT + G T TL N KA
Sbjct: 191 AGVEDVYTQSNGKTRTLENTLKA 213
Score = 33.1 bits (72), Expect = 1.9
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 259 AIAKTYAYLTPDLWRDIPLTKSP 327
AI TY +LTP+LW + PL SP
Sbjct: 217 AIGNTYGFLTPNLWAEQPLPVSP 239
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 111 bits (266), Expect = 6e-24
Identities = 51/58 (87%), Positives = 53/58 (91%)
Frame = +2
Query: 80 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKAT 253
KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNFAKAT
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKAT 182
Score = 52.4 bits (120), Expect = 3e-06
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +1
Query: 229 LGKFC*SHIAAIAKTYAYLTPDLWRDIPLTKSPYSEF 339
LG F + AI+KTY+YLTPDLW++ TKSPY EF
Sbjct: 175 LGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEF 211
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 105 bits (253), Expect = 2e-22
Identities = 51/70 (72%), Positives = 54/70 (77%)
Frame = +2
Query: 44 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 223
GNKIGK H V CKVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYTSARG T
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYTSARGCT 66
Query: 224 GTLGNFAKAT 253
+L FA+AT
Sbjct: 67 ASLDYFAQAT 76
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 105 bits (253), Expect = 2e-22
Identities = 53/83 (63%), Positives = 63/83 (75%)
Frame = +2
Query: 2 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 181
LAKLS++PV G ++ +PH VPC+VTG+CGS+ V LIPAPRGTG VSAPVP KLL M
Sbjct: 134 LAKLSIIPVETATGGKRL-EPHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMM 191
Query: 182 AGVQDCYTSARGSTGTLGNFAKA 250
AG+ D +SA G T TLGNF KA
Sbjct: 192 AGIDDS-SSASGCTATLGNFTKA 213
Score = 31.5 bits (68), Expect = 5.8
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 229 LGKFC*SHIAAIAKTYAYLTPDLWRDIPLTKSPYSEFKV 345
LG F + I+KT++YL PDL ++ KS Y +V
Sbjct: 207 LGNFTKAIFDTISKTHSYLIPDLQKETVFAKSLYQNSRV 245
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 105 bits (251), Expect = 4e-22
Identities = 46/83 (55%), Positives = 61/83 (73%)
Frame = +2
Query: 5 AKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 184
AK ++ PVR G W GKPHTV CK +GKCG+ V++IPAPRGTGI+S V KK+ ++A
Sbjct: 119 AKCAIRPVRLGLWDGAQGKPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELA 178
Query: 185 GVQDCYTSARGSTGTLGNFAKAT 253
G++D YT + G+T T NFAKA+
Sbjct: 179 GIKDLYTLSFGATSTTENFAKAS 201
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 102 bits (244), Expect = 3e-21
Identities = 49/72 (68%), Positives = 57/72 (79%)
Frame = +2
Query: 2 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 181
L KL ++PV RGY G+K KPHTV CKVTG GSV++ LIPAPR T I SAP+PKKLL M
Sbjct: 136 LTKLPIVPVWRGYCGSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMM 194
Query: 182 AGVQDCYTSARG 217
AG+ DC+TSARG
Sbjct: 195 AGINDCHTSARG 206
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 97.1 bits (231), Expect = 1e-19
Identities = 47/58 (81%), Positives = 49/58 (84%)
Frame = +2
Query: 80 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKAT 253
KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT ARG T TLGNFAKAT
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNFAKAT 181
Score = 50.0 bits (114), Expect = 2e-05
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +1
Query: 229 LGKFC*SHIAAIAKTYAYLTPDLWRDIPLTKSPYSEF 339
LG F + AI+K Y+YLTPDLW++ TKSPY EF
Sbjct: 174 LGNFAKATFDAISKIYSYLTPDLWKETVFTKSPYQEF 210
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 88.2 bits (209), Expect = 5e-17
Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Frame = +2
Query: 5 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 178
AK++++PVRRG W G+PH++P KV GK GSV V L+PAP+GTG+V V K LL
Sbjct: 110 AKMNIIPVRRGCGSWQCTCGEPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLT 169
Query: 179 MAGVQDCYTSARGSTGTLGNFAKA 250
AG++D +++ +G T T NF +A
Sbjct: 170 YAGIKDAWSTTKGETRTTENFVRA 193
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 86.6 bits (205), Expect = 1e-16
Identities = 39/44 (88%), Positives = 40/44 (90%)
Frame = +2
Query: 122 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKAT 253
PAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNFAKAT
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKAT 44
Score = 52.4 bits (120), Expect = 3e-06
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +1
Query: 229 LGKFC*SHIAAIAKTYAYLTPDLWRDIPLTKSPYSEF 339
LG F + AI+KTY+YLTPDLW++ TKSPY EF
Sbjct: 37 LGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEF 73
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 85.8 bits (203), Expect = 3e-16
Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Frame = +2
Query: 5 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 178
AKL+++ ++RG W + +PH+VP V GK GSV VRLIP PRG G+V V KK+L+
Sbjct: 117 AKLNIIEIKRGCGSWECRCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILR 176
Query: 179 MAGVQDCYTSARGSTGTLGNFAKA 250
+AGVQD ++ G T T NFAKA
Sbjct: 177 LAGVQDVWSQTFGETRTTVNFAKA 200
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 85.4 bits (202), Expect = 3e-16
Identities = 36/43 (83%), Positives = 39/43 (90%)
Frame = +2
Query: 2 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAP 130
LAKLS++PV RGYWGNKIGKPHTVPCKVTG+C SV V LIPAP
Sbjct: 97 LAKLSIVPVCRGYWGNKIGKPHTVPCKVTGRCSSVLVHLIPAP 139
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 85.4 bits (202), Expect = 3e-16
Identities = 44/73 (60%), Positives = 50/73 (68%)
Frame = +2
Query: 35 GYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAR 214
G+ GNKI KPHTV C+VT SV V I APRGT I+SAPVPKKLL+MA + D + AR
Sbjct: 68 GWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDDGDSLAR 127
Query: 215 GSTGTLGNFAKAT 253
G T L N KAT
Sbjct: 128 GCTAILDNVIKAT 140
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 85.4 bits (202), Expect = 3e-16
Identities = 38/83 (45%), Positives = 58/83 (69%)
Frame = +2
Query: 5 AKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 184
AKL++ +RRGYW + GKP+T+ K +GK GSV V + PAP+GTGIV++ +L+++
Sbjct: 164 AKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKIS 223
Query: 185 GVQDCYTSARGSTGTLGNFAKAT 253
G++DC+T + G T + N KAT
Sbjct: 224 GIRDCFTKSFGRTKSSFNTIKAT 246
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 83.8 bits (198), Expect = 1e-15
Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 LAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 175
+AKL+++ V RG W G+PHTV + GK GSV V L PAPRG G+ +K+L
Sbjct: 103 IAKLNIIDVSRGCGSWECGCGRPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVL 162
Query: 176 QMAGVQDCYTSARGSTGTLGNFAKAT 253
++AG++D +T + G+T T NFAKAT
Sbjct: 163 ELAGIEDIWTRSSGNTRTTVNFAKAT 188
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 83.4 bits (197), Expect = 1e-15
Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 178
AKLS++ VR G W G PH++P G CGSV V L+PAPRG G+V+ V K +L
Sbjct: 113 AKLSLIKVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLG 172
Query: 179 MAGVQDCYTSARGSTGTLGNFAKAT 253
+AGV+D +T G T T NFA+AT
Sbjct: 173 LAGVKDAWTKTFGDTRTTYNFAEAT 197
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 83.0 bits (196), Expect = 2e-15
Identities = 41/62 (66%), Positives = 46/62 (74%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
TV CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTSARG T TL NF K
Sbjct: 162 TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTATLDNFDK 219
Query: 248 AT 253
AT
Sbjct: 220 AT 221
Score = 38.7 bits (86), Expect = 0.038
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 259 AIAKTYAYLTPDLWRDIPLTKSPYSEF 339
AI+ TY+YLTP+LW+ + KS Y EF
Sbjct: 224 AISNTYSYLTPNLWKGLVFAKSTYLEF 250
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 81.4 bits (192), Expect = 6e-15
Identities = 39/84 (46%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Frame = +2
Query: 5 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 178
A L+V P++ G W + + H+VP KV GK GSVT+ +IPAPRG G+V+ K+LL+
Sbjct: 143 AYLNVNPIKMGCGSWECRCDQKHSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLE 202
Query: 179 MAGVQDCYTSARGSTGTLGNFAKA 250
+AG++D +T+A+GST T+ + +KA
Sbjct: 203 LAGLKDAWTTAKGSTPTMNSTSKA 226
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 79.0 bits (186), Expect = 3e-14
Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 178
AKL+++ ++RG W GKPHT+P V GK GSV+V L PAP+G G+ V K +L+
Sbjct: 102 AKLNIIEIKRGCGSWECGCGKPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILR 161
Query: 179 MAGVQDCYTSARGSTGTLGNFAKAT 253
MAG+ D + A G T T N+A AT
Sbjct: 162 MAGIDDAWGFAAGHTKTTVNYALAT 186
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 77.4 bits (182), Expect = 9e-14
Identities = 37/84 (44%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Frame = +2
Query: 5 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 178
A L+V P++ G W + + H+VP KV GK GSV + ++PAPRG G+V+ ++LL+
Sbjct: 124 ALLNVGPIKLGCGSWECRCDQKHSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLE 183
Query: 179 MAGVQDCYTSARGSTGTLGNFAKA 250
+AG++D YT+A+GST T + +KA
Sbjct: 184 LAGLKDAYTTAKGSTPTTNSTSKA 207
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 75.8 bits (178), Expect = 3e-13
Identities = 39/68 (57%), Positives = 45/68 (66%)
Frame = +2
Query: 50 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 229
++ + V KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY SAR T T
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTAT 111
Query: 230 LGNFAKAT 253
L NF+K T
Sbjct: 112 LYNFSKPT 119
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 74.1 bits (174), Expect = 8e-13
Identities = 36/86 (41%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 LAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 175
+AKL+++ V RG W ++ G +++ K GK GSVTV + PAP+G G+ +A + +L
Sbjct: 154 VAKLNIIEVDRGSGSWEDQPGGTNSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRNIL 213
Query: 176 QMAGVQDCYTSARGSTGTLGNFAKAT 253
++AGV+D +T++ G+T T N AKAT
Sbjct: 214 ELAGVEDAWTNSDGNTRTTVNLAKAT 239
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 71.3 bits (167), Expect = 6e-12
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 178
AKL+++PV RG W + G +VP K+TG+ GS V L+PAP G G+V + +++L
Sbjct: 89 AKLNMIPVMRGNGSWESGGGPGTSVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLT 148
Query: 179 MAGVQDCYTSARGSTGTLGNFAKAT 253
+AGV D ++ + G T T N+A+AT
Sbjct: 149 LAGVTDVWSRSAGQTRTTINYAQAT 173
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 70.9 bits (166), Expect = 8e-12
Identities = 38/72 (52%), Positives = 46/72 (63%)
Frame = -2
Query: 258 SDVALAKFPKVPVEPRADV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHLPVTL 79
S + LAK PKV V+P A V QS P+ FLGT A+ +PVP GAG+ T TEP P+TL
Sbjct: 6 SSIVLAKSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITL 65
Query: 78 QGTVCGFPILLP 43
G +CG LLP
Sbjct: 66 CG-LCGACCLLP 76
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 68.5 bits (160), Expect = 4e-11
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = +2
Query: 5 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 178
AKL+++ V RG W G PH++P +V GK GSV V L PAP+G GIV+ KK+ +
Sbjct: 117 AKLNIIKVARGCGSWECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFR 176
Query: 179 MAGVQDCYTSARGSTGTLGN 238
+AG++D + + G T T N
Sbjct: 177 LAGIKDVWVRSFGKTKTKMN 196
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 63.3 bits (147), Expect = 2e-09
Identities = 32/53 (60%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +2
Query: 35 GYWGNKIGKPHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 190
GY GNKIG PHT+PC VT + V V L APRGTG VSA VPKKL +A +
Sbjct: 120 GYKGNKIGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 61.7 bits (143), Expect = 5e-09
Identities = 42/80 (52%), Positives = 47/80 (58%)
Frame = +2
Query: 14 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 193
S LP R Y GN I KP T PCK TG S++ L P IVS VP+KL+ A +
Sbjct: 92 SCLP--RDYCGNNIRKP-TYPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASID 144
Query: 194 DCYTSARGSTGTLGNFAKAT 253
CYTSAR T TLGN AKAT
Sbjct: 145 SCYTSARSYTVTLGNIAKAT 164
Score = 31.5 bits (68), Expect = 5.8
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 229 LGKFC*SHIAAIAKTYAYLTPDLWRDIPLTKSPY 330
LG + A++KT ++ TP+LW++ TKSPY
Sbjct: 157 LGNIAKATFDAVSKT-SHSTPNLWKEAVFTKSPY 189
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 57.2 bits (132), Expect = 1e-07
Identities = 34/81 (41%), Positives = 44/81 (54%)
Frame = -1
Query: 250 GFSKISQGAS*TTS*RVAILYTSHLKKLLRNWRRHNTSTTRGRNQPDCYGTTLAGDLARD 71
G + Q + T+ V I TS L +LL +W +T T+ NQ + GTTL L
Sbjct: 44 GLQSVFQSSGGTSRRGVDIFNTSQLHQLLDSWGGDDTGTSWSWNQSNGNGTTLTRGLGSQ 103
Query: 70 GVWLSYLVTPVTSSDW*N*QL 8
GV L+ + TPVTSSDW N QL
Sbjct: 104 GVRLTQVGTPVTSSDWDNGQL 124
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 52.0 bits (119), Expect = 4e-06
Identities = 27/75 (36%), Positives = 40/75 (53%)
Frame = +1
Query: 31 KRLLG*QDRKATHRPLQGHRQVWFRNSPADSCPSWYWYCVCASS*EASSDGWCTGLLHVS 210
+RLLG QDR+A HRPLQG R + +W+ + + + EA+ D W LLH+S
Sbjct: 94 QRLLGEQDRQAPHRPLQGDRPLRLCAGALHPRAQGHWHRLSSCAQEAAHDSWYLRLLHLS 153
Query: 211 SWFNWHLGKFC*SHI 255
+ H G+ H+
Sbjct: 154 QGLHCHPGQLRQRHL 168
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 51.6 bits (118), Expect = 5e-06
Identities = 23/65 (35%), Positives = 40/65 (61%)
Frame = +2
Query: 59 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 238
K +T+P ++ GK G+ T+ + PA GTG+++ +++L++ GV D T +GS N
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGSRNK-HN 133
Query: 239 FAKAT 253
A+AT
Sbjct: 134 VARAT 138
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 51.2 bits (117), Expect = 7e-06
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +2
Query: 134 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
G+ +V+ VPKK+L+ AG++D +TS+RGST TL NF K
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNFVK 39
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 50.8 bits (116), Expect = 9e-06
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +2
Query: 59 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 238
K HT+P +V GK S V L P+ GTGI++ + +++ AG+QD T + GS+ + N
Sbjct: 96 KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLTKSWGSSNPV-N 154
Query: 239 FAKAT 253
KAT
Sbjct: 155 IVKAT 159
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 50.0 bits (114), Expect = 2e-05
Identities = 24/40 (60%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Frame = +1
Query: 229 LGKFC*SHIA---AIAKTYAYLTPDLWRDIPLTKSPYSEF 339
LG FC + A AI+KTY+YLTPDLW++ TKSPY EF
Sbjct: 118 LGFFCCAAKATFDAISKTYSYLTPDLWKETVFTKSPYQEF 157
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 48.8 bits (111), Expect = 4e-05
Identities = 22/57 (38%), Positives = 36/57 (63%)
Frame = +2
Query: 83 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKAT 253
V G+ G+ V L+PAP GTGI++ + ++++AG D YT +RG+ + N +AT
Sbjct: 124 VNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPM-NVIRAT 179
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 47.2 bits (107), Expect = 1e-04
Identities = 25/67 (37%), Positives = 31/67 (46%)
Frame = +1
Query: 4 C*AVSSTSPKRLLG*QDRKATHRPLQGHRQVWFRNSPADSCPSWYWYCVCASS*EASSDG 183
C +S KR+LG QDR TH P+Q R+ S S YWY E ++G
Sbjct: 163 CQTQFDSSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNG 222
Query: 184 WCTGLLH 204
W LLH
Sbjct: 223 WYPRLLH 229
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 45.6 bits (103), Expect = 3e-04
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
T+P ++ G+ GS V + PA GTG++S + +L++AGV D T + GS + N +
Sbjct: 81 TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGSNTPI-NMIR 139
Query: 248 AT 253
AT
Sbjct: 140 AT 141
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 45.6 bits (103), Expect = 3e-04
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +2
Query: 50 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 229
K+ K T+ +V GK G+ V + PAP+GTG+++ K +L++ G +D Y+ G +
Sbjct: 142 KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYSKNLGKNTS 201
Query: 230 LGNFAKAT 253
L N +AT
Sbjct: 202 L-NMVRAT 208
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 45.2 bits (102), Expect = 4e-04
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
T+P +V G+ + V L PA GTGI++ + ++++AG+Q+ T + GST L N A
Sbjct: 84 TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTKSLGSTNPL-NLAL 142
Query: 248 AT 253
AT
Sbjct: 143 AT 144
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 44.4 bits (100), Expect = 8e-04
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
T+P +V K G V L PA GTG+++ + +L++AGV+D + G++ N AK
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSLGASNA-ANVAK 142
Query: 248 AT 253
AT
Sbjct: 143 AT 144
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 44.4 bits (100), Expect = 8e-04
Identities = 25/88 (28%), Positives = 46/88 (52%)
Frame = +2
Query: 8 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAG 187
K V R+ + K +++P ++G G+ V L PA GTG+++ + +L++AG
Sbjct: 116 KKGVSDARKALIRVPLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAG 175
Query: 188 VQDCYTSARGSTGTLGNFAKATSLPLPR 271
+++ + GS L N A+A + L R
Sbjct: 176 IKNVLAKSLGSKSPLNN-ARAAADALSR 202
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 44.4 bits (100), Expect = 8e-04
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 223
TVP V G G+ + ++PA RGTG+V+ K + ++AG D T GST
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGST 148
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 44.0 bits (99), Expect = 0.001
Identities = 27/80 (33%), Positives = 40/80 (50%)
Frame = +2
Query: 14 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 193
S + RR + K T P + G G+ V L PA GTG+++ + +L+MAGV+
Sbjct: 199 SAIDARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVE 258
Query: 194 DCYTSARGSTGTLGNFAKAT 253
+ GS L N A+AT
Sbjct: 259 NALGKQLGSNNALNN-ARAT 277
>UniRef50_UPI0000D998E5 Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 84
Score = 43.6 bits (98), Expect = 0.001
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +1
Query: 259 AIAKTYAYLTPDLWRDIPLTKSPYSE 336
AI+KTY+YLTPDLW++ TK+PY +
Sbjct: 27 AISKTYSYLTPDLWKETVFTKTPYHD 52
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 41.9 bits (94), Expect = 0.004
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 80 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 217
+V G+ G+ V L PAP+GTGI++ + ++++AG D YT G
Sbjct: 139 EVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNLG 184
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 41.5 bits (93), Expect = 0.005
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
TVP +V G G+ V + PA GTG+++ + ++++AG+ D Y + G + N +
Sbjct: 112 TVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSLGRNNPI-NMIR 170
Query: 248 AT 253
AT
Sbjct: 171 AT 172
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 40.7 bits (91), Expect = 0.010
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
++P +V G+ G+ V LIPA GTGI++ + + + G+ D T + G+ + K
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHDILTKSYGTNNPV-TLVK 148
Query: 248 AT 253
AT
Sbjct: 149 AT 150
>UniRef50_A2XN57 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 84
Score = 40.3 bits (90), Expect = 0.013
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 262 IAKTYAYLTPDLWRDIPLTKSPYSEF 339
+ KTY +LTPD WRD KSP+ E+
Sbjct: 37 LMKTYGFLTPDFWRDTKFVKSPFQEY 62
>UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Rattus norvegicus
Length = 68
Score = 39.9 bits (89), Expect = 0.017
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +2
Query: 131 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKAT 253
RG + + + KKLL +A +QDCY AR + LGN+AKAT
Sbjct: 6 RGRAVFTTVLKKKLL-LASIQDCYMIARVHSLMLGNYAKAT 45
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 39.5 bits (88), Expect = 0.022
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 220
T+P ++ G+ + V L PA GTG+++ VP+ + ++AG+ + + GS
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGS 136
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 38.7 bits (86), Expect = 0.038
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +2
Query: 53 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 232
I K +++P ++ + G+ +V + PA GTG+V+ + +L++AG Q+ G+ L
Sbjct: 136 ITKDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAGYQNARGKQLGTDNAL 195
Query: 233 GNFAKA 250
N AKA
Sbjct: 196 NN-AKA 200
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 38.7 bits (86), Expect = 0.038
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
T P + G G+ V L PA GTG+++ + +L+MAGV++ S L N A+
Sbjct: 254 TFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIRSKNALNN-AR 312
Query: 248 AT 253
AT
Sbjct: 313 AT 314
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 38.7 bits (86), Expect = 0.038
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 220
TVP + K + V L PAP+G GI+++ + ++++AG D YT + GS
Sbjct: 159 TVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIYTKSYGS 209
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 37.5 bits (83), Expect = 0.089
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 238
T+P +V K + ++PA GTG+++ + +L++AGVQ+ G L N
Sbjct: 583 TIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQNVLAKRIGCRSLLNN 639
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 37.5 bits (83), Expect = 0.089
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 92 KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT---LGNFAKATSL 259
K G+ + + PAP GTGIV+ +K +M GV D + GS+ + + N KA SL
Sbjct: 89 KLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSDIIAKSYGSSTSGIVIRNAIKAFSL 147
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 37.5 bits (83), Expect = 0.089
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
++P +V G G+ V L PA GTG+++ + +L+ AGV + T GS N K
Sbjct: 85 SIPHQVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSNILTKCLGSHNP-HNMVK 143
Query: 248 AT 253
AT
Sbjct: 144 AT 145
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 37.1 bits (82), Expect = 0.12
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
T+ V G + TV L PA GTG+++ + +++ AG+ D T + GS T N +
Sbjct: 114 TITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVLTKSMGS-ATAVNVVR 172
Query: 248 AT 253
AT
Sbjct: 173 AT 174
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 36.3 bits (80), Expect = 0.21
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 59 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 220
K T+P +V G V L PA GTG+++ + +L+ AGV++ T + GS
Sbjct: 137 KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKNVLTKSMGS 190
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 36.3 bits (80), Expect = 0.21
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
T+P + G +V L PA GTG+ + + +L GV D ++GS+ N K
Sbjct: 85 TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGVTDVLAKSKGSSNP-HNLVK 143
Query: 248 AT 253
AT
Sbjct: 144 AT 145
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 36.3 bits (80), Expect = 0.21
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
T+ V G+ + V L PA GTG+++ + +L+ AGV D + GS + N
Sbjct: 111 TITHPVQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGSDNAI-NVVH 169
Query: 248 AT 253
AT
Sbjct: 170 AT 171
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 35.9 bits (79), Expect = 0.27
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +2
Query: 53 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 232
I K ++P V G G+ + + P+ G+G+++ + +L++AG+++ GS L
Sbjct: 91 ITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVIAKQLGSDNLL 150
Query: 233 GN 238
N
Sbjct: 151 NN 152
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 35.5 bits (78), Expect = 0.36
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
T+ V GK G+ + L AP+GTGI++ + + ++ G++D + G T N +
Sbjct: 81 TIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKDIVAKSMG-TSNPHNMIR 139
Query: 248 ATSLPL-----PRHMPT 283
AT L P+H+ T
Sbjct: 140 ATMKALSKQNSPKHIAT 156
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 35.5 bits (78), Expect = 0.36
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVS-APVPKKLLQMAGVQDCYTSARGS 220
T+P G+ G+ L PA +GTGIV+ + +L++ G+ D T GS
Sbjct: 84 TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDVLTKTFGS 135
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 35.1 bits (77), Expect = 0.47
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 59 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 238
K +++ G G V + PA GTG+++ + +L++AGV++ GS L N
Sbjct: 84 KSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNILAKQLGSNNPLNN 143
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 34.7 bits (76), Expect = 0.63
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 65 HTVPCKVTGK-CGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 220
HT+ +V GK C ++ V ++PAP G GIV+ + + +AG+++ GS
Sbjct: 69 HTIYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIKNIKAKIHGS 120
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 34.7 bits (76), Expect = 0.63
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
T+ V G+ G+ V + PA GTGI++ + + ++ GV + GST N +
Sbjct: 90 TLHHSVIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHNILAKCLGSTNPY-NIVR 148
Query: 248 AT 253
AT
Sbjct: 149 AT 150
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 33.5 bits (73), Expect = 1.4
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +1
Query: 229 LGKFC*SHIAAIAKTYAYLTPDLWRDIPLTKSPYSE 336
LG+ + AI+KTY+ LTPDLW TK YSE
Sbjct: 200 LGRLAKTTFDAISKTYSCLTPDLWNK---TKPLYSE 232
>UniRef50_A3P1D4 Cluster: Type V secretory pathway, adhesin AidA;
n=36; Burkholderiaceae|Rep: Type V secretory pathway,
adhesin AidA - Burkholderia pseudomallei (strain 1106a)
Length = 746
Score = 33.5 bits (73), Expect = 1.4
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 179 MAGVQD-CYTSARGSTGTLGNFAKATSLPLPRHMPTSLLTCGGIS 310
M G+ D C+T+ARG+ T+ N +P+PR +P ++ G++
Sbjct: 1 MNGINDQCFTAARGAGVTMANRPGDRPVPIPRDLPGVVIFIHGVN 45
>UniRef50_A2AKP6 Cluster: Novel protein; n=12; Murinae|Rep: Novel
protein - Mus musculus (Mouse)
Length = 982
Score = 33.1 bits (72), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 49 QDRKATHRPLQGHRQVWFRNSPADSCPSWYWYCVCASS 162
Q+++ HRPLQG Q D+CP W +C+ S
Sbjct: 945 QEKRLLHRPLQGSSQQGHTFHLEDACPHSPWVSLCSPS 982
>UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 375
Score = 33.1 bits (72), Expect = 1.9
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
TV ++ K G+ V L P P G G+ PV + + G+ D S GST + N K
Sbjct: 264 TVETQLEAKWGASRVVLRPRPAGFGLRVPPVIHAICRSVGITDLSASIYGSTNPV-NVVK 322
Query: 248 A 250
A
Sbjct: 323 A 323
>UniRef50_Q9YEM4 Cluster: Putative methyltransferase; n=1; Aeropyrum
pernix|Rep: Putative methyltransferase - Aeropyrum
pernix
Length = 196
Score = 32.7 bits (71), Expect = 2.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -2
Query: 306 IPPQVRSEV---GICLGNGSDVALAKFPKVPVEPRADV*QSCTPAI*RSFLGTG 154
+PPQ V CL G D+AL P +P +P Q C+P + ++ G G
Sbjct: 83 LPPQALVAVCPYASCLKGGFDIALVNPPYLPEKPPPPGGQGCSPTLSEAWAGEG 136
>UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 256
Score = 32.3 bits (70), Expect = 3.3
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 189 TPAI*RSFLGTGADTIPVPRGAGISRTVTEP 97
TP + RS G GA T+P RG+G+ T T P
Sbjct: 142 TPVLSRSLSGIGAVTMPNARGSGLLATFTAP 172
>UniRef50_A3M596 Cluster: Cobalamin-5-phosphate synthase CobS; n=1;
Acinetobacter baumannii ATCC 17978|Rep:
Cobalamin-5-phosphate synthase CobS - Acinetobacter
baumannii (strain ATCC 17978 / NCDC KC 755)
Length = 173
Score = 32.3 bits (70), Expect = 3.3
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = -2
Query: 252 VALAKFPKVPV--EPRADV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHLPVTL 79
+ L KF V V E + C P + R T P R G+ R++T+ HLP T
Sbjct: 43 ICLLKFALVYVLIEQHQSLFLICIPILGRVVPSILFLTTPYVREKGLGRSLTD-HLPKTA 101
Query: 78 QGTVCGFPILLP 43
+ GF +LLP
Sbjct: 102 SWIITGFVLLLP 113
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 32.3 bits (70), Expect = 3.3
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 89 GKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKAT 253
G+ G+ V L AP GTGI++ + + + GV D T + G++ N +AT
Sbjct: 136 GRFGAGLVYLRSAPSGTGIIAGGPMRAIFESLGVADVVTKSVGTSNPY-NMIRAT 189
>UniRef50_UPI0000ECBC19 Cluster: UPI0000ECBC19 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECBC19 UniRef100 entry -
Gallus gallus
Length = 115
Score = 31.9 bits (69), Expect = 4.4
Identities = 24/60 (40%), Positives = 28/60 (46%)
Frame = -2
Query: 324 RLSQRDIPPQVRSEVGICLGNGSDVALAKFPKVPVEPRADV*QSCTPAI*RSFLGTGADT 145
RL+ R P Q VG G G D A P+ PR+ Q C PA R +GTG DT
Sbjct: 45 RLALRAGPCQWEQRVGDTEGRGGDRKTATATP-PLSPRS---QECGPAPGRLSVGTGTDT 100
>UniRef50_Q6TEI0 Cluster: Type I polyketide synthase; n=1;
Streptomyces diastaticus|Rep: Type I polyketide synthase
- Streptomyces diastaticus
Length = 3179
Score = 31.9 bits (69), Expect = 4.4
Identities = 23/70 (32%), Positives = 30/70 (42%)
Frame = -2
Query: 270 LGNGSDVALAKFPKVPVEPRADV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHL 91
L G V+L + P PR + T A+ R+ L GADT +G R T +
Sbjct: 2608 LPGGGIVSLLAMAEGPDTPRVPTGLAATLALLRALLSRGADTPLWSVTSGAVRADTADTV 2667
Query: 90 PVTLQGTVCG 61
P Q VCG
Sbjct: 2668 PHPEQAAVCG 2677
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 31.5 bits (68), Expect = 5.8
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = +2
Query: 65 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAR 214
HT P +TG+ + + P P G P +L + G+ C R
Sbjct: 234 HTCPIPLTGRFNDAEIEINPRPLGFNAYGNPQIASMLMLTGIHHCSFKVR 283
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 31.5 bits (68), Expect = 5.8
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +2
Query: 68 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
++P +V + L PA GTGIV+ + +L+MAGV++ + GS + N K
Sbjct: 83 SIPHEVLVDQDGAQLLLKPAKPGTGIVAGSRIRLILEMAGVKNIVAKSLGSNNPM-NQVK 141
Query: 248 A 250
A
Sbjct: 142 A 142
>UniRef50_A5NS12 Cluster: Putative uncharacterized protein
precursor; n=3; Methylobacterium sp. 4-46|Rep: Putative
uncharacterized protein precursor - Methylobacterium sp.
4-46
Length = 858
Score = 31.1 bits (67), Expect = 7.7
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 174 RSFLGTGA-DTIPVPRGAGISRTVTEPHLPVTLQGTVCGFPILLPQ*PLRTGRT 16
+SFLG GA + VP AG + P +G P LLPQ PL GR+
Sbjct: 44 QSFLGRGAPQVLSVPDAAGAAPGRPAEAAPAP-EGAAVPAPALLPQRPLPAGRS 96
>UniRef50_A1ART0 Cluster: Fibronectin, type III domain protein
precursor; n=1; Pelobacter propionicus DSM 2379|Rep:
Fibronectin, type III domain protein precursor -
Pelobacter propionicus (strain DSM 2379)
Length = 499
Score = 31.1 bits (67), Expect = 7.7
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 83 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN-FAKATSL 259
VTG + +P P +G +AP GV+ Y AR G + N ++ ++
Sbjct: 155 VTGYLLTEGATTMPQPSASGWSAAPPTSHTFSSPGVKSLYAWARDGAGNVSNAVGRSVTI 214
Query: 260 PLPRHMPTSLLT 295
LP+ TSL T
Sbjct: 215 TLPK-ASTSLQT 225
>UniRef50_Q38AQ9 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 470
Score = 31.1 bits (67), Expect = 7.7
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 172 SSDGWCTGLLHVSSWFNW 225
S DGWC G+ H ++ FNW
Sbjct: 419 SRDGWCAGVRHSNTPFNW 436
>UniRef50_A4QUU0 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 299
Score = 31.1 bits (67), Expect = 7.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 372 FSCYTMTVLDFEL*VWRLSQRDIPPQVRSEVGICLGNGS 256
F+ YT DF + W+LSQ+ +PP RS +G G+
Sbjct: 217 FNKYTQAAKDFIVEQWQLSQKSLPP--RSSIGSAQPTGT 253
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,311,783
Number of Sequences: 1657284
Number of extensions: 9141692
Number of successful extensions: 25751
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 24822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25736
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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