Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0862
         (388 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal prot...   175   2e-44
U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal prot...   175   2e-44
AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p pro...   175   2e-44
AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA...   175   2e-44
X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml prot...   174   4e-44
AE014296-2238|AAF49848.1|  954|Drosophila melanogaster CG11274-P...    30   0.91 
AF219383-1|AAF23183.1| 1023|Drosophila melanogaster tiptop prote...    29   2.1  
AE014134-3557|AAF57242.3| 1024|Drosophila melanogaster CG12630-P...    29   2.1  
AY071397-1|AAL49019.1|  407|Drosophila melanogaster RE47909p pro...    29   2.8  
AE014296-3798|ABI31280.1|  407|Drosophila melanogaster CG40049-P...    29   2.8  
AE014296-3797|EAA46075.1|  407|Drosophila melanogaster CG40049-P...    29   2.8  
AE014296-3796|EAA46076.2|  916|Drosophila melanogaster CG40049-P...    29   2.8  
U35074-1|AAC13917.1|  550|Drosophila melanogaster CCF protein.         27   6.4  
BT023771-1|AAZ41779.1|  550|Drosophila melanogaster LD47601p pro...    27   6.4  
AE014297-178|AAF52073.1|  550|Drosophila melanogaster CG2530-PA ...    27   6.4  

>U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score =  175 bits (426), Expect = 2e-44
 Identities = 79/84 (94%), Positives = 83/84 (98%)
 Frame = +2

Query: 2   LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 181
           LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL M
Sbjct: 140 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTM 199

Query: 182 AGVQDCYTSARGSTGTLGNFAKAT 253
           AG++DCYTSARGSTGTLGNFAKAT
Sbjct: 200 AGIEDCYTSARGSTGTLGNFAKAT 223



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = +1

Query: 229 LGKFC*SHIAAIAKTYAYLTPDLWRDIPLTKSPYSEF 339
           LG F  +  AAIAKTYAYLTPDLW+++PL  +PY  +
Sbjct: 216 LGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252


>U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score =  175 bits (426), Expect = 2e-44
 Identities = 79/84 (94%), Positives = 83/84 (98%)
 Frame = +2

Query: 2   LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 181
           LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL M
Sbjct: 140 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTM 199

Query: 182 AGVQDCYTSARGSTGTLGNFAKAT 253
           AG++DCYTSARGSTGTLGNFAKAT
Sbjct: 200 AGIEDCYTSARGSTGTLGNFAKAT 223



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = +1

Query: 229 LGKFC*SHIAAIAKTYAYLTPDLWRDIPLTKSPYSEF 339
           LG F  +  AAIAKTYAYLTPDLW+++PL  +PY  +
Sbjct: 216 LGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252


>AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p
           protein.
          Length = 267

 Score =  175 bits (426), Expect = 2e-44
 Identities = 79/84 (94%), Positives = 83/84 (98%)
 Frame = +2

Query: 2   LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 181
           LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL M
Sbjct: 140 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTM 199

Query: 182 AGVQDCYTSARGSTGTLGNFAKAT 253
           AG++DCYTSARGSTGTLGNFAKAT
Sbjct: 200 AGIEDCYTSARGSTGTLGNFAKAT 223



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = +1

Query: 229 LGKFC*SHIAAIAKTYAYLTPDLWRDIPLTKSPYSEF 339
           LG F  +  AAIAKTYAYLTPDLW+++PL  +PY  +
Sbjct: 216 LGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252


>AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA
           protein.
          Length = 267

 Score =  175 bits (426), Expect = 2e-44
 Identities = 79/84 (94%), Positives = 83/84 (98%)
 Frame = +2

Query: 2   LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 181
           LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL M
Sbjct: 140 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTM 199

Query: 182 AGVQDCYTSARGSTGTLGNFAKAT 253
           AG++DCYTSARGSTGTLGNFAKAT
Sbjct: 200 AGIEDCYTSARGSTGTLGNFAKAT 223



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = +1

Query: 229 LGKFC*SHIAAIAKTYAYLTPDLWRDIPLTKSPYSEF 339
           LG F  +  AAIAKTYAYLTPDLW+++PL  +PY  +
Sbjct: 216 LGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252


>X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml protein
           S2 protein.
          Length = 267

 Score =  174 bits (423), Expect = 4e-44
 Identities = 78/84 (92%), Positives = 83/84 (98%)
 Frame = +2

Query: 2   LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 181
           LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP+KLL M
Sbjct: 140 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTM 199

Query: 182 AGVQDCYTSARGSTGTLGNFAKAT 253
           AG++DCYTSARGSTGTLGNFAKAT
Sbjct: 200 AGIEDCYTSARGSTGTLGNFAKAT 223



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = +1

Query: 229 LGKFC*SHIAAIAKTYAYLTPDLWRDIPLTKSPYSEF 339
           LG F  +  AAIAKTYAYLTPDLW+++PL  +PY  +
Sbjct: 216 LGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252


>AE014296-2238|AAF49848.1|  954|Drosophila melanogaster CG11274-PA
            protein.
          Length = 954

 Score = 30.3 bits (65), Expect = 0.91
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +2

Query: 62   PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 184
            PH+V  K  G  G + + L+P   G G+++  + K+L + A
Sbjct: 907  PHSVAAKRNGNAGKLAL-LLPGASGAGVINEDLEKQLRERA 946


>AF219383-1|AAF23183.1| 1023|Drosophila melanogaster tiptop protein
           protein.
          Length = 1023

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
 Frame = +2

Query: 68  TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
           T   K T  CG      +P   G G  SAP P +L   A    C +S+  ST +  N +K
Sbjct: 332 TAHMKETQHCGVQIPSPLPTG-GVGTPSAPPPTRLATSASNSAC-SSSSSSTSSSSNSSK 389

Query: 248 A-------TSLPLPRHM 277
           +        ++PLPR +
Sbjct: 390 SELNMLIKETMPLPRKL 406


>AE014134-3557|AAF57242.3| 1024|Drosophila melanogaster CG12630-PA
           protein.
          Length = 1024

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
 Frame = +2

Query: 68  TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 247
           T   K T  CG      +P   G G  SAP P +L   A    C +S+  ST +  N +K
Sbjct: 333 TAHMKETQHCGVQIPSPLPTG-GVGTPSAPPPTRLATSASNSAC-SSSSSSTSSSSNSSK 390

Query: 248 A-------TSLPLPRHM 277
           +        ++PLPR +
Sbjct: 391 SELNMLIKETMPLPRKL 407


>AY071397-1|AAL49019.1|  407|Drosophila melanogaster RE47909p
           protein.
          Length = 407

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +2

Query: 98  GSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKA 250
           G   +     P G G+V     + + ++ G++D Y    GST  + N AKA
Sbjct: 252 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKA 301


>AE014296-3798|ABI31280.1|  407|Drosophila melanogaster CG40049-PC,
           isoform C protein.
          Length = 407

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +2

Query: 98  GSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKA 250
           G   +     P G G+V     + + ++ G++D Y    GST  + N AKA
Sbjct: 252 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKA 301


>AE014296-3797|EAA46075.1|  407|Drosophila melanogaster CG40049-PA,
           isoform A protein.
          Length = 407

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +2

Query: 98  GSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKA 250
           G   +     P G G+V     + + ++ G++D Y    GST  + N AKA
Sbjct: 252 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKA 301


>AE014296-3796|EAA46076.2|  916|Drosophila melanogaster CG40049-PB,
           isoform B protein.
          Length = 916

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +2

Query: 98  GSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKA 250
           G   +     P G G+V     + + ++ G++D Y    GST  + N AKA
Sbjct: 252 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKA 301



 Score = 28.7 bits (61), Expect = 2.8
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +2

Query: 98  GSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKA 250
           G   +     P G G+V     + + ++ G++D Y    GST  + N AKA
Sbjct: 529 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKA 578



 Score = 28.7 bits (61), Expect = 2.8
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +2

Query: 98  GSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKA 250
           G   +     P G G+V     + + ++ G++D Y    GST  + N AKA
Sbjct: 806 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKA 855


>U35074-1|AAC13917.1|  550|Drosophila melanogaster CCF protein.
          Length = 550

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = -3

Query: 269 LAMAAMWL*QNFPRCQLNHELTCSNPVHQPSEEAS*ELAQTQYQYHEGQE 120
           + MAA +   N+    L+H ++  + + Q  ++   + +QTQ Q+H  Q+
Sbjct: 1   MTMAACYA--NYDMSSLSHGMSALSALQQQQQQQQQQHSQTQQQHHHQQQ 48


>BT023771-1|AAZ41779.1|  550|Drosophila melanogaster LD47601p
           protein.
          Length = 550

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = -3

Query: 269 LAMAAMWL*QNFPRCQLNHELTCSNPVHQPSEEAS*ELAQTQYQYHEGQE 120
           + MAA +   N+    L+H ++  + + Q  ++   + +QTQ Q+H  Q+
Sbjct: 1   MTMAACYA--NYDMSSLSHGMSALSALQQQQQQQQQQHSQTQQQHHHQQQ 48


>AE014297-178|AAF52073.1|  550|Drosophila melanogaster CG2530-PA
           protein.
          Length = 550

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = -3

Query: 269 LAMAAMWL*QNFPRCQLNHELTCSNPVHQPSEEAS*ELAQTQYQYHEGQE 120
           + MAA +   N+    L+H ++  + + Q  ++   + +QTQ Q+H  Q+
Sbjct: 1   MTMAACYA--NYDMSSLSHGMSALSALQQQQQQQQQQHSQTQQQHHHQQQ 48


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,432,697
Number of Sequences: 53049
Number of extensions: 438441
Number of successful extensions: 1372
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)