Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0860
         (565 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7B919 Cluster: Putative uncharacterized protein; n=1; ...    34   2.6  
UniRef50_Q9YW72 Cluster: Putative uncharacterized protein MSV020...    33   4.6  
UniRef50_Q1WTK7 Cluster: DNA/RNA helicase, DEAD/DEAH box family;...    33   6.1  
UniRef50_Q16PQ9 Cluster: Putative uncharacterized protein; n=2; ...    33   6.1  
UniRef50_Q05FN9 Cluster: Putative glutamyl-tRNA synthetase; n=1;...    32   8.1  

>UniRef50_A7B919 Cluster: Putative uncharacterized protein; n=1;
           Actinomyces odontolyticus ATCC 17982|Rep: Putative
           uncharacterized protein - Actinomyces odontolyticus ATCC
           17982
          Length = 393

 Score = 33.9 bits (74), Expect = 2.6
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 327 IKDSLARNIAFLHHLSEVINEEMQLPFYRGVECYIENIRSSDD 455
           +  SL R +A LH+L E +   + LP Y  +EC   N+   D+
Sbjct: 123 LPSSLGRALAALHNLPETVFSSIGLPSYTAIECRDRNLALLDE 165


>UniRef50_Q9YW72 Cluster: Putative uncharacterized protein MSV020;
           n=1; Melanoplus sanguinipes entomopoxvirus|Rep: Putative
           uncharacterized protein MSV020 - Melanoplus sanguinipes
           entomopoxvirus (MsEPV)
          Length = 175

 Score = 33.1 bits (72), Expect = 4.6
 Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = +3

Query: 141 HIFFHKKNIKFVICFK-LNWFLLKSINFSLYYFLQ*FIRLLMYICVIF*LDIVQSTERPL 317
           HI    K +++ I +K L ++ +K+ NFS Y F   F  +  YI ++  ++ + S +R  
Sbjct: 81  HITTIIKLLEYPINYKSLEYYFIKNENFSKYQFKLLFTHMRKYILILNNINTLYSLKR-- 138

Query: 318 SVKIKDSLARNIAFLH 365
           +VK++D + + I   H
Sbjct: 139 NVKLEDIIKQKILKEH 154


>UniRef50_Q1WTK7 Cluster: DNA/RNA helicase, DEAD/DEAH box family;
           n=1; Lactobacillus salivarius subsp. salivarius
           UCC118|Rep: DNA/RNA helicase, DEAD/DEAH box family -
           Lactobacillus salivarius subsp. salivarius (strain
           UCC118)
          Length = 986

 Score = 32.7 bits (71), Expect = 6.1
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +3

Query: 252 RLLMYICVIF*LDIVQSTERPLSVKIKDSLARNIAFLHHLSEVINEEMQLPF-YRGVECY 428
           +LL Y    F L +  + ER     I +    N+ +   L E + EEM +PF Y GV  Y
Sbjct: 351 KLLDYFTPDFLLGMTATPERSDDKNIYELFDYNVPYEIRLQEALEEEMLVPFHYIGVSDY 410

Query: 429 IENIRSSDD 455
             N    DD
Sbjct: 411 TYNGEVIDD 419


>UniRef50_Q16PQ9 Cluster: Putative uncharacterized protein; n=2;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 339

 Score = 32.7 bits (71), Expect = 6.1
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +3

Query: 294 VQSTERPLSVKIKDSLARNIAFLHHLSE-VINEEMQLPFYRGVECYIENIRSSDDFKA 464
           ++   RPL+   + + A+N+AFL  L + +++E M  PFY     Y  ++   D+  A
Sbjct: 244 IKFNNRPLNESQRKAAAKNVAFLLALQDYLVHEVMLEPFYHSCRQYGASLAGDDEHLA 301


>UniRef50_Q05FN9 Cluster: Putative glutamyl-tRNA synthetase; n=1;
           Candidatus Carsonella ruddii PV|Rep: Putative
           glutamyl-tRNA synthetase - Carsonella ruddii (strain PV)
          Length = 332

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 147 FFHKKNI-KFVICFKLNWFLLKSINFSLYYFLQ*FI 251
           F++KKNI K  I FK N+F +K  NFSL Y    FI
Sbjct: 79  FYYKKNIFKKKIIFKKNFFNIKLNNFSLSYSFFLFI 114


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,595,274
Number of Sequences: 1657284
Number of extensions: 10304466
Number of successful extensions: 21358
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21352
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)