Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0860
         (565 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   1.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.2  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 7/29 (24%), Positives = 20/29 (68%)
 Frame = +3

Query: 156 KKNIKFVICFKLNWFLLKSINFSLYYFLQ 242
           +KN+ +++ F +N   + ++ +++YY+ Q
Sbjct: 96  RKNLYYLLLFVINVLYVLTLCYAVYYWRQ 124


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 80  LLVTLLYLTFSSMVFCC 30
           LLV + Y  +  ++FCC
Sbjct: 254 LLVCIYYFYYMHLLFCC 270



 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 262 CIFVLYFSLILFKV 303
           CI+  Y++ ILF V
Sbjct: 237 CIYYFYYAFILFTV 250


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -1

Query: 43  WCFVVDPGNW 14
           WC++V+ G W
Sbjct: 134 WCWIVEIGGW 143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,262
Number of Sequences: 336
Number of extensions: 3107
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)