Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0860
         (565 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding pr...    24   3.9  
AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding pr...    23   6.9  
AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.    23   9.1  
AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding pr...    23   9.1  

>AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding
           protein AgamOBP39 protein.
          Length = 246

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 459 KAWELCGKLNQIPKEFRTLL 518
           ++  +C KL +IPK+ R LL
Sbjct: 169 RSLSICAKLQRIPKDRRDLL 188


>AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP35 protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 333 DSLARNIAFLHHLSEVINEEMQLPFYRGVECYIEN 437
           D+  R    L +L +  N E  +  YR  +CY +N
Sbjct: 102 DNAKRTERCLVYLPQECNGEPCVQAYRAFQCYYQN 136


>AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.
          Length = 140

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 356 CNIPCQTIL 330
           CNIPCQ +L
Sbjct: 90  CNIPCQNLL 98


>AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP36 protein.
          Length = 277

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 333 DSLARNIAFLHHLSEVINEEMQLPFYRGVECYIEN 437
           D+  R    L +L +  N E  +  YR  +CY +N
Sbjct: 102 DNAKRTERCLVNLPQECNGEPCVQAYRAFQCYYQN 136


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,831
Number of Sequences: 2352
Number of extensions: 10636
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)