Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0859
         (428 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5AK08 Cluster: Putative uncharacterized protein PCL5; ...    33   1.9  
UniRef50_A6L2G5 Cluster: Putative anti-sigma factor; n=1; Bacter...    31   7.7  
UniRef50_A2F649 Cluster: Putative uncharacterized protein; n=1; ...    31   7.7  

>UniRef50_Q5AK08 Cluster: Putative uncharacterized protein PCL5;
           n=1; Candida albicans|Rep: Putative uncharacterized
           protein PCL5 - Candida albicans (Yeast)
          Length = 304

 Score = 33.5 bits (73), Expect = 1.9
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +2

Query: 95  FCKICFLNDGL*MMQFKYGGEIVSLWFNISVYLKNKKYEDHLFLMVIF 238
           +CKIC LN+   + Q  +    +  W N  + L   KYE+   L++IF
Sbjct: 163 WCKICGLNENSNVKQLVHIESTILQWLNYDLCLIGSKYENWCNLLLIF 210


>UniRef50_A6L2G5 Cluster: Putative anti-sigma factor; n=1;
           Bacteroides vulgatus ATCC 8482|Rep: Putative anti-sigma
           factor - Bacteroides vulgatus (strain ATCC 8482 / DSM
           1447 / NCTC 11154)
          Length = 360

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2

Query: 161 VSLWFNISVYLKNKKYEDHLFLMVIFK 241
           +S W+N+ +Y KN+  +D  F  +IF+
Sbjct: 300 LSRWYNVDIYFKNESLKDKRFAGIIFR 326


>UniRef50_A2F649 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 522

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +2

Query: 65  FKNTNKN*PGFCKICFLNDGL*MMQFKYGGEIVSLWFNISVYLKNKK 205
           FKNTN   PG   +C+ ++    +  +YGG + S    ++VYL+N K
Sbjct: 125 FKNTNNYSPGNAFLCYNSEFTSNVASEYGGAL-SFSMAVTVYLENCK 170


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,382,339
Number of Sequences: 1657284
Number of extensions: 7483847
Number of successful extensions: 14267
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14266
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)