Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0859
         (428 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g45260.1 68415.m05634 expressed protein contains Pfam profile...    27   4.1  
At2g18080.1 68415.m02102 serine carboxypeptidase S28 family prot...    27   7.1  

>At2g45260.1 68415.m05634 expressed protein contains Pfam profile
           PF04859: Plant protein of unknown function (DUF641
          Length = 425

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 415 SIGKNPDTNIGYFSNTKYV 359
           ++G NPD+N G F  +KY+
Sbjct: 289 ALGTNPDSNFGIFCRSKYL 307


>At2g18080.1 68415.m02102 serine carboxypeptidase S28 family protein
           similar to SP|Q9NQE7 Thymus-specific serine protease
           precursor (EC 3.4.-.-) {Homo sapiens}; contains Pfam
           profile PF05577: Serine carboxypeptidase S28
          Length = 365

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -1

Query: 344 NKGGSKNPDFTVEIRHGGFFVVFDNIKILHTSCSS 240
           + GGS NP F   I + G    +  +K  H +C S
Sbjct: 40  SSGGSDNPWFFFGISYSGALSAWFRLKFPHLTCGS 74


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,938,952
Number of Sequences: 28952
Number of extensions: 168701
Number of successful extensions: 314
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 675111616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)