Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0858
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    25   0.75 
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   9.3  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +2

Query: 224 SHPQADKHRNQQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTI 403
           +H    K+ N  L   VV+ E  LKS V  + +K +     LEL  ++ +    D  K  
Sbjct: 23  THKYTTKYDNIDLE-NVVKNERLLKSYVDCLLEKGRCSPDGLELKKNMPDAIETDCSKCS 81

Query: 404 KKQ 412
           +KQ
Sbjct: 82  EKQ 84


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 86  LSLVLKTAQLDFELVETAVQLGDVRAS 6
           L+L+    Q  FE++   +  GDV ++
Sbjct: 105 LNLIFLLIQTRFEMINNIITRGDVTST 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,269
Number of Sequences: 336
Number of extensions: 1973
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)