Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0858
(678 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 38 0.006
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 36 0.023
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 35 0.069
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 35 0.069
06_03_0297 + 19267491-19267677,19267799-19267843,19268466-192685... 32 0.37
04_01_0308 + 4188726-4190351 31 0.64
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 31 0.85
12_02_1021 + 25364349-25364465,25367237-25367324,25367851-253680... 31 1.1
07_01_0325 + 2275922-2276013,2276467-2276500,2276810-2276932,227... 31 1.1
09_06_0346 + 22435164-22435491,22435990-22436114,22436402-224365... 30 2.0
07_03_0699 + 20772415-20773450,20789050-20789606,20790971-207915... 30 2.0
06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389... 29 3.4
04_04_0056 + 22406872-22407258,22408405-22409310 29 3.4
11_05_0057 - 18709565-18709945,18710179-18710217 29 4.5
07_03_0337 + 16918613-16919078,16921610-16921725,16922039-169222... 29 4.5
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472... 29 4.5
05_07_0021 - 27100249-27101838,27102434-27102547 29 4.5
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 29 4.5
06_03_1306 + 29208882-29209547,29209641-29209854,29209947-292100... 28 6.0
02_02_0662 - 12736904-12737214,12737632-12737914 28 6.0
02_02_0554 - 11434744-11435364,11435741-11436442 28 6.0
01_06_0765 - 31808775-31809443,31809547-31809703,31809777-318098... 28 7.9
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 38.3 bits (85), Expect = 0.006
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Frame = +2
Query: 254 QQLNARVVEAETKLKSEVTRIKKKLQIQIT---ELELSLDVANKTNIDLQKTIKKQSLQL 424
+Q N E E K+EV +IKK ++ Q + E+ L VA + +D Q+ I + Q+
Sbjct: 440 EQKNMLAKELEAS-KAEVEKIKKAMEGQASALHEMSAQLRVAQEKYLDKQEEIDRARAQV 498
Query: 425 TEIQTHYDEVQRQLQVTLDQYGVAQRRISHSPERLRRFVATTSRPYALSAQSSSNT 592
E+ + +V LD+ + + S ER+ + S + S N+
Sbjct: 499 EELNVSLQNTKESYEVMLDEANYEKVCLKKSVERMEAETKSASEEWQSKELSFVNS 554
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/67 (26%), Positives = 39/67 (58%)
Frame = +2
Query: 269 RVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYD 448
R+ E ET+++ E++ ++ L+ +TE E L A K ++DL++ +K + + + D
Sbjct: 798 RIAELETQVQ-ELSAAEQSLKSHLTEFESKLASAEKKSMDLEQELKDATEECNSSRLRVD 856
Query: 449 EVQRQLQ 469
E+ +L+
Sbjct: 857 ELSGELE 863
Score = 35.1 bits (77), Expect = 0.052
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +2
Query: 218 NRSHPQADKHRNQQLNARVVEAETKLKSEVTRIKKKLQIQIT---ELELSLDVANKTNID 388
N SH + ++ + E KL++E++ ++LQ +I E+E+ L+ K
Sbjct: 294 NISHLTEELSLHRSSEESLKEKTLKLENELSSAHEELQAKILNLQEMEIKLEEQAKEKQT 353
Query: 389 LQKTIKKQSLQLTEIQTHYDE 451
+ T++KQ Q+ +QT DE
Sbjct: 354 WEATLEKQQEQILNLQTELDE 374
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/125 (19%), Positives = 57/125 (45%)
Frame = +2
Query: 227 HPQADKHRNQQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIK 406
H A+ +N +L A++ EA + + + +K L ++ LE ++ N +++ I
Sbjct: 1139 HATAES-KNAELEAQMHEALETIGKKDSEVKD-LNERLAALESEIESLTHVNEAMKQEIN 1196
Query: 407 KQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRISHSPERLRRFVATTSRPYALSAQSSS 586
+ +++ E+Q + + + ++ V ++ I H E R + S + SA+ +
Sbjct: 1197 AKLVKVDELQEKLSSISSEKEEVAEKVVVHEKTIEHLREEHSRGLELQSAAESRSAEIEN 1256
Query: 587 NTRNL 601
R +
Sbjct: 1257 ELREV 1261
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/84 (25%), Positives = 39/84 (46%)
Frame = +2
Query: 272 VVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDE 451
V+E + ++EVT +K+KL TE E + + N L+ + + E+Q +
Sbjct: 1261 VLETVAQKEAEVTDLKEKLVSLETENEKLVGI----NEALKGELDTKVAMFDELQEQFSS 1316
Query: 452 VQRQLQVTLDQYGVAQRRISHSPE 523
+ + ++ V +R ISH E
Sbjct: 1317 THAEKEEAAEKLAVHERTISHLTE 1340
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +1
Query: 496 PAQDKSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQEL 675
P Q S E EE++ Y L K+ + ++YE ++ + E + + + K E+EL
Sbjct: 1522 PFQVSSTVEEHEELKSKYNITLEEKQLLNEKYESAKKELGE-AIAKLEEQMNVDKSEKEL 1580
>03_01_0423 +
3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 34.7 bits (76), Expect = 0.069
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +2
Query: 290 KLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQ 469
+LK EVT +++K+QIQ+ ELE + A+ + LQ + +Q + + Q Q
Sbjct: 755 ELKKEVTSLERKIQIQVQELEQKREEADAMHAQLQDE-RSNHMQKEAALRALENLHSQSQ 813
Query: 470 VTLDQYGVAQRRISHSPERL 529
+ Q R + HS ++L
Sbjct: 814 EEVKQMA---RDVEHSNKKL 830
Score = 31.1 bits (67), Expect = 0.85
Identities = 23/102 (22%), Positives = 45/102 (44%)
Frame = +2
Query: 290 KLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQ 469
+LK EVT ++ K+QIQ ELE + A+ + LQ + +Q + + Q Q
Sbjct: 681 ELKKEVTSLELKIQIQAQELEQKREEADTVHAQLQDE-RSNHMQKEAALHALENLHSQSQ 739
Query: 470 VTLDQYGVAQRRISHSPERLRRFVATTSRPYALSAQSSSNTR 595
+ + + + + ++ L++ V + R + Q R
Sbjct: 740 ---EDFNLVKLNLENTVCELKKEVTSLERKIQIQVQELEQKR 778
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 290 KLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQ 394
+LK EVT ++ K+QI + ELE + A+ + LQ
Sbjct: 607 ELKKEVTSLEVKIQILVQELEQKREEADVMHAQLQ 641
>03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 34.7 bits (76), Expect = 0.069
Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Frame = +2
Query: 203 REGRRNRSHPQAD----KHRNQQLNARV---VEAETKLKSEVTRIKK-KLQIQ--ITELE 352
+E +R S Q D + N +L + V +E + L++++ +K+ KL++ +T+ E
Sbjct: 841 QEAQRKLSEAQDDSEVLRRSNSKLQSTVESLIEECSSLQNQIAELKRQKLELHGHLTQQE 900
Query: 353 LSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLD 481
LD + K N+D KT++ +L+ +Q ++ L L+
Sbjct: 901 QELDNSKKRNLDFCKTVEFLEAKLSSLQKDISSKEQSLLSELE 943
>06_03_0297 +
19267491-19267677,19267799-19267843,19268466-19268542,
19268652-19268774,19269029-19269133,19269217-19269289,
19269588-19269690,19269890-19270144,19270996-19271125,
19271278-19271352,19271470-19271550
Length = 417
Score = 32.3 bits (70), Expect = 0.37
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = -3
Query: 379 GLVGHIKREFQFSNLDL----QLLLDAC-DFRLQFSLGFHDASVQL 257
G++ I R N+D+ QL++D C DF Q S+GF D VQL
Sbjct: 154 GVLREIARHASVENIDICEIDQLVIDVCKDFFPQLSVGFKDPRVQL 199
>04_01_0308 + 4188726-4190351
Length = 541
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 242 KHRNQQLNARVVEAETK---LKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQ 412
K N +L + + E K ++E+ R+K +L E++ N N ++ K ++
Sbjct: 123 KTENNKLQSEALIVEKKQIMFEAEIKRLKMELGAVTEAKEVAAKAFNAQNEEITKKLEDL 182
Query: 413 SLQLTEIQTHYDEVQ 457
+L EIQT+ D V+
Sbjct: 183 KRKLEEIQTNKDLVE 197
>03_05_1124 + 30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 31.1 bits (67), Expect = 0.85
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 221 RSHPQADKHR-NQQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQK 397
R+ ++HR ++ A ++ E + + K KL+ ++ EL LDV IDL++
Sbjct: 1103 RAMAACNEHRFRRETKASIIIQEARETGALKEAKDKLEKRVEELTWRLDVEKHLRIDLEE 1162
Query: 398 TIKKQSLQLTEIQTHYDEVQRQL 466
+ +++ +++ E+Q +L
Sbjct: 1163 A---KGQEISNLKSVLQEMQEKL 1182
>12_02_1021 +
25364349-25364465,25367237-25367324,25367851-25368004,
25368196-25368271,25368350-25368475,25369400-25369744
Length = 301
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/110 (19%), Positives = 44/110 (40%)
Frame = +2
Query: 260 LNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQT 439
+NA+ + R +K+ Q + +LE + N LQK + + + + T
Sbjct: 113 VNAKRTRRMLSNRESARRSRKRKQAHLNDLESQVSQLRSENASLQKRLSDMTQKYKQSTT 172
Query: 440 HYDEVQRQLQVTLDQYGVAQRRISHSPERLRRFVATTSRPYALSAQSSSN 589
Y +Q D +R+++ + E +RR + + S +S+
Sbjct: 173 EYGNLQ-------DDMNAMRRKVNIAEEAVRRVTGIGLQLFTTSEMPASS 215
>07_01_0325 +
2275922-2276013,2276467-2276500,2276810-2276932,
2277334-2277401,2277494-2277585,2278662-2278987,
2280771-2281142
Length = 368
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/63 (22%), Positives = 25/63 (39%)
Frame = -1
Query: 459 LWTXXXXXXXXXSCRDCFLMVFWRSMLVLLATSRESSSSVIWICNFFLMRVTSDFNLVSA 280
LW C L++ W ++ + T +E + +W C F ++R + L A
Sbjct: 183 LWPPYASCVGSVVCHGSPLVLCWATLKIEYQTEQERHGARVWSCQFVIVRSCGHYVLPVA 242
Query: 279 STT 271
T
Sbjct: 243 KVT 245
>09_06_0346 +
22435164-22435491,22435990-22436114,22436402-22436514,
22436919-22437023,22437147-22437531,22437645-22437776,
22437980-22438450,22438550-22439278,22439579-22439767
Length = 858
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +2
Query: 200 AREGRRNRSHP--QADKHRNQQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVAN 373
A EGR+ +A K + N+ E + ++ +TR K L+ + ++ L AN
Sbjct: 379 ASEGRQKAEKELFEASKMFRARENSLCKE-KIAVEERLTREKVSLEKEHLQIYNELQKAN 437
Query: 374 KTNIDLQKTIKKQSLQLTEIQTHYDEVQRQ 463
+ ++L++ + + + E+QT E+QRQ
Sbjct: 438 EQIMELERKLMHANSLMEELQTVQGELQRQ 467
>07_03_0699 +
20772415-20773450,20789050-20789606,20790971-20791567,
20792258-20792413
Length = 781
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = -1
Query: 288 VSASTTRAFSC*FRCLSACGWLRFLLPSLADDA-QPHDGTGR-TQPSISVSAVPA 130
+S S R++ RC++AC W A DA PH GR P ++ PA
Sbjct: 105 LSLSPRRSYGYLKRCIAACSWSSMARWCQARDAPAPHPARGRGVHPRQPIAVAPA 159
>06_03_0099 +
16633928-16638213,16638299-16638386,16638823-16638950,
16640008-16640278
Length = 1590
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = +2
Query: 299 SEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQL-QVT 475
+ +TR KK+ Q E +DV N T++D+ K ++ + ++ E + +
Sbjct: 678 THITRDKKRYVNQQVIHETDIDVQNVTHVDVSK-VRASDISVSRNSQKASETRSDMANSQ 736
Query: 476 LDQYGVAQRRISHSPERLRRFVATTSRPYALSAQSSSNT 592
L+Q + + P+ A +R Y+ SA NT
Sbjct: 737 LEQIHASNSSMVRGPQSYLE-AALHNRVYSTSATDIVNT 774
>04_04_0056 + 22406872-22407258,22408405-22409310
Length = 430
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = -2
Query: 572 RLTRRACS*LPRISSTSPVSDLSCAGRLRTGRESPATASGPHRSGSGSQ*AAETA 408
R TR + ++S SP+S SCA T P TA +G G + A A
Sbjct: 11 RATRSSALVRAILASRSPLSSSSCAASPTTAAPVPGTAPRAAAAGDGDEGCAAAA 65
>11_05_0057 - 18709565-18709945,18710179-18710217
Length = 139
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -1
Query: 216 LLPSLADDAQPHDGTGRTQPSISVSAVPAPCGQL-RPPCRRQ*VPLARSQDGATRFRARG 40
LLP D+A DG R + + S VPA CG PC +P AR A G
Sbjct: 6 LLPQEVDEAGIADGYRRRTLTAASSLVPAACGSTGGMPC----IPAARRGRCKLLGVATG 61
Query: 39 DGGSTR 22
DG R
Sbjct: 62 DGCQLR 67
>07_03_0337 +
16918613-16919078,16921610-16921725,16922039-16922208,
16922509-16922602,16923371-16923457,16923529-16923609,
16923800-16923925,16924541-16924649,16924723-16924802,
16925401-16925529,16925605-16925705,16926075-16926208,
16926307-16926404,16926488-16926607,16927008-16927022,
16927930-16927957,16928066-16928118,16928446-16928517,
16928605-16928652,16928928-16929033,16929110-16929168,
16929792-16929887,16929942-16929959
Length = 801
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +1
Query: 499 AQDKSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIE 666
A+ S E E ++G EQ R+++ VE+ + + L +NV + + AK++
Sbjct: 92 AEGGSGAAESELVKGLKEQVERLRKEVEEHKQTQKATEAALEHVNVAYAEADAKVQ 147
>06_03_0092 + 16546204-16546693,16546958-16547028,16547145-16547221,
16547322-16547469,16550080-16550148,16550348-16550509,
16550625-16550785,16551240-16551324,16552068-16552144,
16552234-16552441,16555844-16555921,16556463-16556591,
16556665-16556808,16556893-16557038,16557137-16557293,
16557391-16557449,16557582-16557741,16557849-16557998,
16558093-16558229,16558325-16558471,16558556-16558657,
16558742-16558799,16558895-16558996,16559729-16559766,
16559868-16559994,16560075-16560245,16560334-16560465,
16560577-16560686,16560866-16560926,16561031-16561208,
16561293-16561498,16561590-16561709,16561903-16562001,
16562152-16562370,16562701-16562840,16563175-16563286,
16563375-16563425,16563509-16563589,16563683-16563853,
16563934-16564089,16564174-16564380,16565145-16565215,
16565315-16565414,16565783-16565839,16566156-16566212,
16566308-16566388,16566467-16566606,16566641-16566764
Length = 2041
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +1
Query: 511 SLTGEVEEIRGNYEQA------LRVKRSVEQQ-YEESQTRVNELTVINVNLSSSKAKIEQ 669
SLT EVEE++ + + L KRS EQQ EE Q ++ E V ++E+
Sbjct: 1517 SLTAEVEELKTSLQSEKQRADDLEKKRSEEQQANEEKQKKMEETDVKMRQFQEYLRRLEE 1576
Query: 670 ELA 678
+LA
Sbjct: 1577 KLA 1579
>05_07_0021 - 27100249-27101838,27102434-27102547
Length = 567
Score = 28.7 bits (61), Expect = 4.5
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Frame = +2
Query: 206 EGRRNRSHPQADKHRNQQLNARVVEAETKLKSEVTRIKK------KLQIQITELELSLDV 367
E RR +A QQLNA++++A ++L++ ++ KL + +LE
Sbjct: 300 EIRRLTEQEKAASAHVQQLNAKLLKARSRLEAVTAADERADETISKLAAILRQLEDDAAA 359
Query: 368 ANKTNIDLQKTIKKQSLQLTE-IQTHYDEVQRQLQVTLDQYGVAQRRISHSPERLRRFV- 541
A K L T ++++ E I +++++ ++ + G A+ + + RL+ V
Sbjct: 360 AEKEK-TLADTENRRAMSDAENIDAEIAAAEKRIRESVRELGAARASEAAATARLKAIVE 418
Query: 542 -ATTSRPYALSAQSSSN 589
AT + A + +SSS+
Sbjct: 419 SATLATAAAATPRSSSS 435
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Frame = +2
Query: 266 ARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHY 445
A +VEA LK E+ + KKL+ EL N +L+ +K+ LQ+
Sbjct: 596 ASIVEARDNLKKELLDVFKKLESTSQELVDERKTVTTLNRELEALVKQ--LQMD------ 647
Query: 446 DEVQRQLQVTLDQYGVAQRRISHSPERL-RRFVATTSRPYALSAQSSSNTRNL 601
E ++ L+ LD+ + ++ S L + T SR L A+ ++ L
Sbjct: 648 SEARKALEADLDEATKSLDEMNRSALSLSKELEETNSRKDTLEAEKKMLSKAL 700
>06_03_1306 +
29208882-29209547,29209641-29209854,29209947-29210023,
29210132-29210171,29210254-29210323,29210419-29210488,
29210747-29210995,29212810-29214700,29215458-29215771
Length = 1196
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 398 TIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRISHSPERLRRFV 541
++KK++LQ+ E EVQ+QL L+ Q RI L+R +
Sbjct: 352 SVKKKNLQVAEALRMQMEVQKQLHEQLEVQRQLQLRIEEHARYLQRIL 399
>02_02_0662 - 12736904-12737214,12737632-12737914
Length = 197
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 210 PSLADDAQPHDGTGRTQPSISVSAVPAPCGQLR-PPCRRQ*VPLARSQDGA 61
P + H G+G PS++V AV P Q P + P+A S+ GA
Sbjct: 24 PPAKPGSYKHGGSGALSPSLAVKAVGVPARQSSGPGADVEEEPMAVSRSGA 74
>02_02_0554 - 11434744-11435364,11435741-11436442
Length = 440
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/91 (20%), Positives = 42/91 (46%)
Frame = +2
Query: 194 SSAREGRRNRSHPQADKHRNQQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVAN 373
+S +EG P K ++ +V A + + + K + + +L + +
Sbjct: 327 TSEKEGAAESLSPPPMKVKHHLTPPPIVRAPGQFQEDEV---KSPEPSVHKLAVQVKKLR 383
Query: 374 KTNIDLQKTIKKQSLQLTEIQTHYDEVQRQL 466
K NI+L+ + ++LTE++ ++D + R L
Sbjct: 384 KENIELRDRNAELGVELTELRNNFDTLSRGL 414
>01_06_0765 -
31808775-31809443,31809547-31809703,31809777-31809894,
31810170-31810308
Length = 360
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 218 NRSHPQADKHRNQQLNARVVEAETKLKSEVTRIKKKLQIQITELE 352
+R P++ H ++ RV E ETKL +V KKL+ Q+ E
Sbjct: 128 DRHSPRSPLHEKKRAGTRVAELETKL-GKVQDELKKLREQLATAE 171
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,907,917
Number of Sequences: 37544
Number of extensions: 280694
Number of successful extensions: 1255
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1252
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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