Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0857
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68217-2|CAA92470.2| 134|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z68217-5|CAC70098.1| 166|Caenorhabditis elegans Hypothetical pr... 34 0.091
U80441-7|AAB37655.1| 252|Caenorhabditis elegans Hypothetical pr... 33 0.16
AF043701-4|ABP57821.1| 132|Caenorhabditis elegans Hypothetical ... 33 0.28
AF043701-3|ABP57819.1| 147|Caenorhabditis elegans Hypothetical ... 32 0.48
Z68217-8|CAI59117.1| 156|Caenorhabditis elegans Hypothetical pr... 31 0.64
U80441-6|AAT68894.1| 256|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF043701-5|ABP57822.1| 166|Caenorhabditis elegans Hypothetical ... 29 4.5
AC006807-1|AAK84615.1| 130|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z68217-2|CAA92470.2| 134|Caenorhabditis elegans Hypothetical
protein F58G6.3 protein.
Length = 134
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +1
Query: 163 MLSGGHIIQTCLHFIQSTASYMLMLIFMTY 252
+LS H QT L F+Q SY LMLIFMT+
Sbjct: 81 LLSTMHFFQTFLFFVQLGFSYCLMLIFMTF 110
>Z68217-5|CAC70098.1| 166|Caenorhabditis elegans Hypothetical
protein F58G6.7 protein.
Length = 166
Score = 34.3 bits (75), Expect = 0.091
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Frame = +1
Query: 1 VAIFLAGVLYEGLKYYREALHTRA-----------SSASDSRVNITKSECATNSPCAGTA 147
+ IFL E LK+ R L + S+ D NI ++ T
Sbjct: 36 IEIFLIAFCLEALKFGRTKLSPKVKIVEKKVDCCCSTEKDGLWNIPETIPLTQKTVTLAP 95
Query: 148 VVKYSMLSGGHIIQTCLHFIQSTASYMLMLIFMTYKCGCVWPLSL 282
+ S++S H+ + L F+Q Y LML+ MTY WP+ L
Sbjct: 96 FTRDSLISKFHMASSLLVFVQHFIDYSLMLVSMTYN----WPIFL 136
>U80441-7|AAB37655.1| 252|Caenorhabditis elegans Hypothetical
protein F27C1.2a protein.
Length = 252
Score = 33.5 bits (73), Expect = 0.16
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 22/105 (20%)
Frame = +1
Query: 4 AIFLAGVLYEGLKYYREALH---TRASS-ASDSRVNITKSECAT----------NSPCAG 141
AIF+ G YEG+K++R L T+A A+ S V T+S T N P +
Sbjct: 107 AIFIMGATYEGVKWFRVFLQMTQTQAQVLANKSCVETTRSSGGTCHQSVTHSQSNKPQSE 166
Query: 142 TAVVKYSM--------LSGGHIIQTCLHFIQSTASYMLMLIFMTY 252
++ S+ S +IQ L+ Q +Y LMLI MTY
Sbjct: 167 PFLISASVARTPATSPFSPQRLIQMLLYIFQLVLAYWLMLIVMTY 211
>AF043701-4|ABP57821.1| 132|Caenorhabditis elegans Hypothetical
protein K12C11.6 protein.
Length = 132
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 178 HIIQTCLHFIQSTASYMLMLIFMTY 252
HI QT L +Q + SY+LML+FMT+
Sbjct: 82 HIGQTILFMVQLSFSYILMLLFMTF 106
>AF043701-3|ABP57819.1| 147|Caenorhabditis elegans Hypothetical
protein K12C11.3 protein.
Length = 147
Score = 31.9 bits (69), Expect = 0.48
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = +1
Query: 16 AGVLYEGLKYYREALHTRASSASDSRVNITKSECATNSPCAGTAVVKYSMLSGGHIIQTC 195
AG L E LKY + A + A D C S + + H++Q
Sbjct: 52 AGFLLEFLKYSKWAASMQMRPAGDVDRRTKYGGCVVPSEN------RKKLFWARHVVQAM 105
Query: 196 LHFIQSTASYMLMLIFMTY 252
HF Q+ +++LM I+MT+
Sbjct: 106 YHFWQTLLAFILMNIYMTF 124
>Z68217-8|CAI59117.1| 156|Caenorhabditis elegans Hypothetical
protein F58G6.9a protein.
Length = 156
Score = 31.5 bits (68), Expect = 0.64
Identities = 24/79 (30%), Positives = 35/79 (44%)
Frame = +1
Query: 16 AGVLYEGLKYYREALHTRASSASDSRVNITKSECATNSPCAGTAVVKYSMLSGGHIIQTC 195
AG+L E LKY R A R + N+ G + KY+ HII +
Sbjct: 56 AGILLEALKYARWATEERMKIDQE---NVDSKTKYGGIKIPGKSE-KYNFWKR-HIIDSL 110
Query: 196 LHFIQSTASYMLMLIFMTY 252
HF Q +Y+LM ++M +
Sbjct: 111 YHFWQLLLAYILMNVYMVF 129
>U80441-6|AAT68894.1| 256|Caenorhabditis elegans Hypothetical
protein F27C1.2b protein.
Length = 256
Score = 30.3 bits (65), Expect = 1.5
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 28/111 (25%)
Frame = +1
Query: 4 AIFLAGVLYEGLKYYRE--------------------ALHTRASSASDSRVNITKSECAT 123
AIF+ G YEG+K++R AL T SS ++T S+ +
Sbjct: 107 AIFIMGATYEGVKWFRVFLQMTQTQAQVLANKSCVEFALQTTRSSGGTCHQSVTHSQ--S 164
Query: 124 NSPCAGTAVVKYSM--------LSGGHIIQTCLHFIQSTASYMLMLIFMTY 252
N P + ++ S+ S +IQ L+ Q +Y LMLI MTY
Sbjct: 165 NKPQSEPFLISASVARTPATSPFSPQRLIQMLLYIFQLVLAYWLMLIVMTY 215
>AF043701-5|ABP57822.1| 166|Caenorhabditis elegans Hypothetical
protein K12C11.7 protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 160 SMLSGGHIIQTCLHFIQSTASYMLMLIFMTY 252
S+ S H + L F+Q+ Y LML+ MTY
Sbjct: 100 SISSWRHFASSFLFFLQNFVDYSLMLVAMTY 130
>AC006807-1|AAK84615.1| 130|Caenorhabditis elegans Hypothetical
protein Y58A7A.1 protein.
Length = 130
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 181 IIQTCLHFIQSTASYMLMLIFMTY 252
+I L Q T +Y LMLIFMT+
Sbjct: 73 LIDPLLQLFQLTIAYFLMLIFMTF 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,881,566
Number of Sequences: 27780
Number of extensions: 284772
Number of successful extensions: 599
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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