Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0855
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.8  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   4.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.5  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -3

Query: 677 LMTSIAVECVRFPPHCGPAGSKPVTRAGRPPAWRPALPTT 558
           + T+   E  R P      GSKPV    +P  W P   T+
Sbjct: 404 ISTTPRPEWARPPSTPSADGSKPVQTTPKPGQWVPEKSTS 443


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 69  NSHYVEGESRYIWMPDGEGVPQLVDLHEPIDYELLGSRSGA 191
           +S  + GE+ YI   DG+   Q   LH  +DY       GA
Sbjct: 146 HSKEIRGENTYILALDGDIDFQPEALHLLVDYMKKNKTLGA 186


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 69  NSHYVEGESRYIWMPDGEGVPQLVDLHEPIDYELLGSRSGA 191
           +S  + GE+ YI   DG+   Q   LH  +DY       GA
Sbjct: 460 HSKEIRGENTYILALDGDIDFQPEALHLLVDYMKKNKTLGA 500


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 69  NSHYVEGESRYIWMPDGEGVPQLVDLHEPIDYELLGSRSGA 191
           +S  + GE+ YI   DG+   Q   LH  +DY       GA
Sbjct: 693 HSKEIRGENTYILALDGDIDFQPEALHLLVDYMKKNKTLGA 733


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 69  NSHYVEGESRYIWMPDGEGVPQLVDLHEPIDYELLGSRSGA 191
           +S  + GE+ YI   DG+   Q   LH  +DY       GA
Sbjct: 693 HSKEIRGENTYILALDGDIDFQPEALHLLVDYMKKNKTLGA 733


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 519 PIASALLMSQTKKLPRARPTSGTPAA 442
           PI+S+ + S     P A  +SG+PA+
Sbjct: 21  PISSSGMTSPAAAPPPATTSSGSPAS 46


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 293 GWRGSVNSSRS*CAVHKHLAIVLVLSGE 210
           G    +N+    CA+H HL+ ++ L  E
Sbjct: 494 GTNKQLNTLNKICALHHHLSKLVKLFNE 521


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 293 GWRGSVNSSRS*CAVHKHLAIVLVLSGE 210
           G    +N+    CA+H HL+ ++ L  E
Sbjct: 219 GTNKQLNTLNKICALHHHLSKLVKLFNE 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,636
Number of Sequences: 336
Number of extensions: 3890
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)