Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0855
(688 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 44 2e-04
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 39 0.003
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 38 0.006
SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043) 33 0.22
SB_35417| Best HMM Match : DTHCT (HMM E-Value=1.7) 33 0.29
SB_44067| Best HMM Match : Mucin (HMM E-Value=5.4) 31 0.66
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_7820| Best HMM Match : zf-HYPF (HMM E-Value=2.5) 30 2.0
SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_40905| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_50539| Best HMM Match : IL17 (HMM E-Value=4.1) 29 4.7
SB_17550| Best HMM Match : WW (HMM E-Value=0.0012) 29 4.7
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_38937| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_24982| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036) 28 8.1
SB_25282| Best HMM Match : rve (HMM E-Value=6.3e-12) 28 8.1
>SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = +2
Query: 257 INSVRNSHYRANRGTVVIVHGWNNNGNTQMNPLIRSAFLAVQDVNVIVVDWHRLANSNYN 436
+ ++ S Y + T VI HG+ +G+T +R A L DVNV++ DW A+ Y
Sbjct: 90 VKKLKASTYDGKKRTFVIAHGYTESGSTSWVGHMRQALLQKDDVNVVITDWGPGADGMYW 149
Query: 437 TAAAGVPDVG 466
A A VG
Sbjct: 150 QATANTRLVG 159
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +2
Query: 269 RNSH-YRANRGTVVIVHGWNNNGNTQMNPLIRSAFLAVQDVNVIVVDWHRLAN--SNYNT 439
RNS +R +R V+I+HG+ +GN ++R L + +NVI VDW A+ + Y+
Sbjct: 14 RNSTAFRGDRKLVLIIHGFMQSGNVSWIRVMRDELLKREPMNVITVDWQSGADGLNLYHV 73
Query: 440 AAAGVPDVGRALGNFL 487
AA VG L +
Sbjct: 74 AAGNTRVVGAQLAELI 89
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +1
Query: 523 QVHLIGFSLGAHVVGNAGRQAGGRPARVT 609
+VHLIG SLGAHV G AG + G+ R+T
Sbjct: 102 RVHLIGHSLGAHVAGYAGERLSGKVGRIT 130
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Frame = +1
Query: 529 HLIGFSLGAHVVGNAGR---QAGGRPARVTGLDPA 624
+L+GFSLGAH+ G GR + G + R+TGLDPA
Sbjct: 690 YLVGFSLGAHISGYVGRRIAKTGQKLNRITGLDPA 724
Score = 34.3 bits (75), Expect = 0.094
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 356 IRSAFLAVQDVNVIVVDWHRLANSNYNTAAAGVPDVGRALGNFLVWLIN 502
IR A + +D NVI DW R A Y A A VG + + +L N
Sbjct: 632 IRHALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNN 680
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/36 (55%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +1
Query: 526 VHLIGFSLGAHVVGNAGR---QAGGRPARVTGLDPA 624
VH+IGFS GAHV G GR + G R+T LDPA
Sbjct: 191 VHVIGFSFGAHVAGYVGRRMKKRGRMIDRITALDPA 226
Score = 35.9 bits (79), Expect = 0.031
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Frame = +2
Query: 269 RNSHYRANRGTVVIVHGWNNNGNTQMNPL----------IRSAFLAVQDVNVIVVDWHRL 418
R++H+ A+R TV+I+HG+ G T + + +++ L D NVI+VDW R
Sbjct: 97 RDTHFNASRRTVIIIHGF--AGFTTLTSIRHEVNWWGFPMKNELLWEGDFNVIIVDWMRG 154
Query: 419 ANSNYNTAAAGVPDVGRALGNFL 487
A + A A VG L
Sbjct: 155 AWFPFTRAVANTRLVGAQTARLL 177
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = +1
Query: 529 HLIGFSLGAHVVGNAG---RQAGGRPARVTGLDPA 624
H IGFSLGAH+ G G ++ G R+TGLDPA
Sbjct: 174 HSIGFSLGAHISGYVGQRLKRIGRHLDRITGLDPA 208
Score = 31.9 bits (69), Expect = 0.50
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Frame = +2
Query: 200 VLAFHQTEPKQSPGACERHINSVRNSHYRANRGTVVIVHGWNNNGNTQM--------NPL 355
+L + Q P + + ++ S + +R T IVHG+ +
Sbjct: 55 LLLYTQASPDKYEVLSDADTATIEKSSFLPHRTTRFIVHGYAGLDSVDSIIDLKGWWGIR 114
Query: 356 IRSAFLAVQDVNVIVVDWHRLANSNYNTAAAGVPDVGRALGNFLVWLIN 502
++ L D NVI+VDW R A Y A A VG + F+ +++
Sbjct: 115 MKDELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILS 163
>SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 514 NWNQVHLIGFSLGAHVVGNAGRQAGGRPARVTGLDPAGPQ 633
N + HL G S+G H+VG Q R A V + PAG Q
Sbjct: 130 NKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPAGIQ 169
>SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043)
Length = 183
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 514 NWNQVHLIGFSLGAHVVGNAGRQAGGRPARVTGLDPAGPQ 633
N + HL G S+G H+VG Q R A V + PAG Q
Sbjct: 8 NKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPAGIQ 47
>SB_35417| Best HMM Match : DTHCT (HMM E-Value=1.7)
Length = 357
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 217 DRTKTIARCL*TAHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEP 351
D+ + A CL HQL+ + QP+ R H+P+ +Q H +P
Sbjct: 306 DQASSGASCLPKRHQLQLQQPRSHQPQPRSHQPQPQQPRSHQPQP 350
>SB_44067| Best HMM Match : Mucin (HMM E-Value=5.4)
Length = 238
Score = 31.5 bits (68), Expect = 0.66
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 309 SSTDGTTMATPR*TLSSDPPSLPFK----T*MSSLLTGTDLLIQTTILPPLASRMSVAPS 476
++T T T T+++ PPSLP + T S+ +TG L T + + RMS PS
Sbjct: 161 AATTSATNTTATMTIANTPPSLPQQQILLTIKSTKITGQQPLQYTNSVGSIYHRMSSKPS 220
Query: 477 ATFWFGSSTMLRQLEPS 527
+ + G R L S
Sbjct: 221 SRLFVGLVLSSRSLRIS 237
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 291 TEVPLSSSTDGTTMATPR*TLSSDPPSLPFKT*M--SSLLTGTDLLIQTTILPPLASRMS 464
T+ P ++ D T A P T+S + P T + S++ GT ++ +TT +P +
Sbjct: 3548 TDEP-ETTVDPETTAVPETTVSQETTMAPETTALPESTVAPGTTVVPETTAVPETTVVTT 3606
Query: 465 VAPSAT 482
VAP +T
Sbjct: 3607 VAPDST 3612
>SB_7820| Best HMM Match : zf-HYPF (HMM E-Value=2.5)
Length = 307
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +3
Query: 174 GSRSGANN-QYWLFTXXXXXXXXVLVNGTSTP*GIHT--TAPTEVPLSSSTDGTTMATPR 344
G ++G++N +Y++ + + T P G T PT S T G + ATP
Sbjct: 124 GGKNGSDNCEYFIVSSIKQEHKIIQTKTTQGPSGASTQGATPTTGGPSGPTGGASSATPS 183
Query: 345 *TLSSD-PPSLPFKT 386
T +S PP+ P T
Sbjct: 184 ATTASTAPPTTPSTT 198
>SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = -2
Query: 276 EFLTELMCRSQAPGDCFGSVW*KASTDYWRRFWSPV-IHSRWVHAGPLAAEHLHHQASRC 100
E+LT CR GD V A + W V SR GP A H H A
Sbjct: 648 EYLTATACRRNLAGDVCAIVRIHAFLEQWGLINYQVDADSRPAPMGPPATSHFHVMADTP 707
Query: 99 NGFLPL 82
G PL
Sbjct: 708 AGLQPL 713
>SB_40905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 29.1 bits (62), Expect = 3.5
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = -2
Query: 249 SQAPGDCFGSVW*K-ASTDYWRRFWSPVIHSRWVHAG---PLAAEHLHHQASRCNGFLPL 82
S PGD FGS W + S DY+ SP + +R H G P A L +R FL +
Sbjct: 82 SGTPGDRFGS-WDRFESRDYFESCTSPRVTNRQTHGGVVRPSDAYWLKPYLNRPKSFLWV 140
Query: 81 H-SDYCLRES 55
SDY LR++
Sbjct: 141 SVSDY-LRDA 149
>SB_50539| Best HMM Match : IL17 (HMM E-Value=4.1)
Length = 456
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 468 APSATFWFGSSTMLRQLEPSASYWLQFRCSRR 563
APS ++M R+ + +ASYW+ RCS R
Sbjct: 65 APSPRQMLARTSMTRREKITASYWITARCSVR 96
>SB_17550| Best HMM Match : WW (HMM E-Value=0.0012)
Length = 677
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 262 LREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQI--RLPCRSRRECH 396
++E + P + +Y H+ W+HP + SH+I + C R CH
Sbjct: 19 MKESSSRPGR-KYFFHKMSGMTSWKHPLDLSHKIPAEISCSKTRACH 64
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 255 TSTP*GIHTTAPTEVPLSSSTDGTTMATPR*TLSSDPPSLPFKT*M--SSLLTGTDLLIQ 428
T+ P T VP+++S GTT+A T+ D ++P T ++ +TGT L +
Sbjct: 2427 TAKPDTTGAAETTAVPVTTSVPGTTVAAET-TVVRDTTAVPGTTAALEATAVTGTSTLPK 2485
Query: 429 TTI 437
TT+
Sbjct: 2486 TTV 2488
>SB_38937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2085
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 180 WSPVIHSRWVHAGPLAAEHLHHQASRCNGFLP 85
W V+ RWV A P+ ++ +R GF P
Sbjct: 1845 WPKVLKPRWVTALPIVISDINATKTRMTGFAP 1876
>SB_24982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 520 NQVHLIGFSLGAHVVGNAGRQAGGRPARVTGLD 618
N VH+ +LG H + G A RPA VTG+D
Sbjct: 335 NTVHVDLLNLGGH--SSNGPSADTRPAEVTGID 365
>SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 282 TAPTEVPLSSSTDGTTMATPR 344
T PT VP + ST TT TPR
Sbjct: 138 TTPTTVPTTLSTTATTATTPR 158
>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
Length = 362
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +3
Query: 255 TSTP*GIHTTAPTEVPLSSSTDGTTMATPR*TLSSDPPSLPFKT*MSSLLTGTDLLIQTT 434
T+TP + TT+P P TT T PP++PF + LL T + T
Sbjct: 200 TTTPLLMVTTSPLPPPTIPFLATTTSLLMVTTSPLPPPTIPFLATTAPLLMVTTSPLPTP 259
Query: 435 ILPPLAS 455
+P LA+
Sbjct: 260 TIPFLAT 266
>SB_25282| Best HMM Match : rve (HMM E-Value=6.3e-12)
Length = 451
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -2
Query: 195 YWRRFWSPVIHSRWVHAGPLAAEHLHHQASRCNGFLP 85
YW+ S + WV A P+ ++ +R GF P
Sbjct: 388 YWKELASGETNREWVTALPIVISDINASKTRMTGFAP 424
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,747,682
Number of Sequences: 59808
Number of extensions: 538721
Number of successful extensions: 2962
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2955
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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