Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0855
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 31 0.77
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 29 2.4
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 29 2.4
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 29 2.4
Z81081-4|CAB03092.2| 491|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL023825-1|CAA19442.2| 491|Caenorhabditis elegans Hypothetical ... 28 7.2
AF052060-1|AAC06226.1| 491|Caenorhabditis elegans Olf-1/EBF tra... 28 7.2
Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical p... 27 9.5
Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical p... 27 9.5
Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical pr... 27 9.5
U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to isle... 27 9.5
AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like ... 27 9.5
AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein... 27 9.5
AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein. 27 9.5
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 31.1 bits (67), Expect = 0.77
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +3
Query: 276 HTTAPTEVPLSSSTDGTTMATPR*T--LSSDPPSLPFKT*MSSLLTGTDLLIQTTILPPL 449
HTT PT+ P + T TT T R T ++S + P +T + + T T T PP
Sbjct: 277 HTTPPTQTP-PTQTPPTTTTTRRVTVVVTSPTTTTPRRTITTRIWTTTTTQAPPTEAPPT 335
Query: 450 ASRMSVAPSATFW 488
+ + + T W
Sbjct: 336 EAPPTTQTTPTSW 348
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical protein
C37C3.6c protein.
Length = 1487
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 271 EFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPCRSRRECHRC 402
E QP+ + + + +QQ Q P +P + CRSR++ C
Sbjct: 1237 EIQSAEQPQPQQPQQQQQQQQQQPQQPRQSMEDICRSRQDAGPC 1280
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
C37C3.6a protein.
Length = 1558
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 271 EFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPCRSRRECHRC 402
E QP+ + + + +QQ Q P +P + CRSR++ C
Sbjct: 1237 EIQSAEQPQPQQPQQQQQQQQQQPQQPRQSMEDICRSRQDAGPC 1280
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 271 EFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPCRSRRECHRC 402
E QP+ + + + +QQ Q P +P + CRSR++ C
Sbjct: 1237 EIQSAEQPQPQQPQQQQQQQQQQPQQPRQSMEDICRSRQDAGPC 1280
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 258 STP*GIHTTAPTEVPLSSSTDGTTMAT 338
S P I T T +P +SST GTTM T
Sbjct: 438 SLPTPIEITTSTVIPATSSTSGTTMTT 464
>Z81081-4|CAB03092.2| 491|Caenorhabditis elegans Hypothetical
protein Y16B4A.1 protein.
Length = 491
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 587 VVAPHALQVWTPPDHS 634
+++PHA++V TPP HS
Sbjct: 315 LISPHAIRVTTPPKHS 330
>AL023825-1|CAA19442.2| 491|Caenorhabditis elegans Hypothetical
protein Y16B4A.1 protein.
Length = 491
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 587 VVAPHALQVWTPPDHS 634
+++PHA++V TPP HS
Sbjct: 315 LISPHAIRVTTPPKHS 330
>AF052060-1|AAC06226.1| 491|Caenorhabditis elegans Olf-1/EBF
transcription factor protein.
Length = 491
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 587 VVAPHALQVWTPPDHS 634
+++PHA++V TPP HS
Sbjct: 315 LISPHAIRVTTPPKHS 330
>Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical
protein C07A9.3c protein.
Length = 893
Score = 27.5 bits (58), Expect = 9.5
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +1
Query: 256 HQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQ 360
HQ ++++ + ++ + P+++QQ Q P + S Q
Sbjct: 116 HQQQQQYQQQQAQHHQMYAPQIQQQQQQPQQQSQQ 150
>Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical
protein C07A9.3b protein.
Length = 965
Score = 27.5 bits (58), Expect = 9.5
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +1
Query: 256 HQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQ 360
HQ ++++ + ++ + P+++QQ Q P + S Q
Sbjct: 183 HQQQQQYQQQQAQHHQMYAPQIQQQQQQPQQQSQQ 217
>Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical
protein C07A9.3a protein.
Length = 960
Score = 27.5 bits (58), Expect = 9.5
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +1
Query: 256 HQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQ 360
HQ ++++ + ++ + P+++QQ Q P + S Q
Sbjct: 183 HQQQQQYQQQQAQHHQMYAPQIQQQQQQPQQQSQQ 217
>U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to islet
cell diabetesautoantigen protein 1 protein.
Length = 767
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +2
Query: 167 ITGLQKRRQ*SVLAFHQTE-PKQSPGACERHINSVR---NSHYRANRGTVVIVHGWNNNG 334
+ LQ + ++ FH K+S + I R N YR R + V+VH W+ +G
Sbjct: 643 LKNLQNSQTRTITQFHYLSWQKESTPTSAKSILEFRRKVNKSYRG-RSSAVLVHSWDGSG 701
Query: 335 NT 340
T
Sbjct: 702 RT 703
>AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like
kinase protein.
Length = 960
Score = 27.5 bits (58), Expect = 9.5
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +1
Query: 256 HQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQ 360
HQ ++++ + ++ + P+++QQ Q P + S Q
Sbjct: 183 HQQQQQYQQQQAQHHQMYAPQIQQQQQQPQQQSQQ 217
>AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein
protein.
Length = 767
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +2
Query: 167 ITGLQKRRQ*SVLAFHQTE-PKQSPGACERHINSVR---NSHYRANRGTVVIVHGWNNNG 334
+ LQ + ++ FH K+S + I R N YR R + V+VH W+ +G
Sbjct: 643 LKNLQNSQTRTITQFHYLSWQKESTPTSAKSILEFRRKVNKSYRG-RSSAVLVHSWDGSG 701
Query: 335 NT 340
T
Sbjct: 702 RT 703
>AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein.
Length = 767
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +2
Query: 167 ITGLQKRRQ*SVLAFHQTE-PKQSPGACERHINSVR---NSHYRANRGTVVIVHGWNNNG 334
+ LQ + ++ FH K+S + I R N YR R + V+VH W+ +G
Sbjct: 643 LKNLQNSQTRTITQFHYLSWQKESTPTSAKSILEFRRKVNKSYRG-RSSAVLVHSWDGSG 701
Query: 335 NT 340
T
Sbjct: 702 RT 703
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,116,141
Number of Sequences: 27780
Number of extensions: 391275
Number of successful extensions: 1126
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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