Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0854
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 31 0.43
Z48334-4|CAB61010.2| 426|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF143297-1|AAD33902.1| 426|Caenorhabditis elegans tubby homolog... 29 2.3
AF068721-9|AAC19265.1| 570|Caenorhabditis elegans Hypothetical ... 29 2.3
Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical pr... 28 4.0
U41034-4|AAY43995.1| 385|Caenorhabditis elegans Hypothetical pr... 27 9.1
U37429-9|AAA79344.3| 796|Caenorhabditis elegans Hypothetical pr... 27 9.1
AC006769-9|AAF60585.2| 779|Caenorhabditis elegans Hypothetical ... 27 9.1
AC006645-2|AAF39844.2| 796|Caenorhabditis elegans Hypothetical ... 27 9.1
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 31.5 bits (68), Expect = 0.43
Identities = 23/87 (26%), Positives = 38/87 (43%)
Frame = -1
Query: 303 EGDGSGSLSNDVLKGKSPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVPT*LTRR 124
EG SGS + K K EAK + K + PSA +D + T T +++ P T+
Sbjct: 693 EGSSSGSATE---KSKEIEAKSKKDDTKKPLEPSAASSDPSSSSTTTTTITKEPP--TQS 747
Query: 123 KCRELKSSALTSVTRPEKLMMSDAPGG 43
++A + +P + + A G
Sbjct: 748 ASASGAAAAAAASAQPSESSSATAASG 774
>Z48334-4|CAB61010.2| 426|Caenorhabditis elegans Hypothetical
protein F10B5.4 protein.
Length = 426
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 38 WSPPGASDIINFSGRVTDVKADDFSSLHLRRVSYV 142
W+ S ++NF GRVT +F +H Y+
Sbjct: 352 WNDETQSYVLNFHGRVTQASVKNFQIIHQSSPEYI 386
>AF143297-1|AAD33902.1| 426|Caenorhabditis elegans tubby homolog
protein.
Length = 426
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 38 WSPPGASDIINFSGRVTDVKADDFSSLHLRRVSYV 142
W+ S ++NF GRVT +F +H Y+
Sbjct: 352 WNDETQSYVLNFHGRVTQASVKNFQIIHQSSPEYI 386
>AF068721-9|AAC19265.1| 570|Caenorhabditis elegans Hypothetical
protein ZK1055.7 protein.
Length = 570
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -1
Query: 336 SSDVTDNDVVCEGDGSGSLSNDVLKGKSPEAKDLRTRLKMRISPSAEPTDAETLGT 169
S++VT+ + + + +K P + D + R+K+ +SP+A P DAE GT
Sbjct: 463 SANVTEQTISIKNTRNEQPVLLTVKHAIPRSTDEKIRVKL-VSPAATPYDAEKAGT 517
>Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical
protein F02H6.2 protein.
Length = 478
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 441 QVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEG 298
Q +RD EV+D F EE+D EV D + + D D EG
Sbjct: 28 QAERDGWNEVIDNVGEFEDEEVDEEV--DEEEDHAEDEERDTDDEVEG 73
>Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical
protein F02H6.2 protein.
Length = 478
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 441 QVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEG 298
Q +RD EV+D F EE+D EV D + + D D EG
Sbjct: 28 QAERDGWNEVIDNVGEFEDEEVDEEV--DEEEDHAEDEERDTDDEVEG 73
>U41034-4|AAY43995.1| 385|Caenorhabditis elegans Hypothetical
protein M02D8.7 protein.
Length = 385
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 392 SRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETE 291
S PK I R++ SP+V AP+ + +L TE
Sbjct: 330 SDPKTYIARIEALSPVVRMAPLRILDILERTRTE 363
>U37429-9|AAA79344.3| 796|Caenorhabditis elegans Hypothetical
protein F09E5.5 protein.
Length = 796
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +1
Query: 373 INLFGREVGPAVNNFLEKIPVYLTDYAAEVSRVLEYVAQL--VINRLRKLLE 522
INL +E + + Y TDY AE S+ E+ + + + N L +E
Sbjct: 459 INLTIQEFNELAGKYRDAFTAYKTDYFAERSKYQEFTSNIIAIANNLHTCIE 510
>AC006769-9|AAF60585.2| 779|Caenorhabditis elegans Hypothetical
protein Y45G12C.11 protein.
Length = 779
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 26 YAGSWSPPGASDIINFSGRVTDV 94
+ GSW P SD INF+ +T +
Sbjct: 511 FCGSWYPDEFSDDINFTSTITPI 533
>AC006645-2|AAF39844.2| 796|Caenorhabditis elegans Hypothetical
protein F56A4.6 protein.
Length = 796
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 26 YAGSWSPPGASDIINFSGRVTDV 94
+ GSW P SD INF+ +T +
Sbjct: 528 FCGSWYPDEFSDDINFTSTITPI 550
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,935,018
Number of Sequences: 27780
Number of extensions: 205098
Number of successful extensions: 683
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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