Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0851
(806 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0127 + 21019266-21019670 31 1.4
08_02_0396 - 16654603-16655030,16655803-16655906,16655988-166565... 31 1.4
05_03_0288 - 11653136-11654074,11655252-11655965 30 2.5
07_01_0975 + 8223269-8224354 29 3.3
08_02_1091 + 24256025-24256190,24256806-24257978,24258066-242587... 29 4.4
08_02_0918 - 22617388-22617693,22617799-22617848,22618538-226188... 29 4.4
01_07_0374 + 43144861-43144998,43145695-43145794,43146499-431466... 29 4.4
01_07_0157 - 41547505-41547861,41547949-41548078,41548180-415484... 29 5.8
10_02_0030 + 4350970-4351165,4351502-4351723,4351889-4352502 28 7.6
09_01_0137 + 2063881-2063934,2066218-2066448,2066656-2067249,206... 28 7.6
05_07_0140 - 27982037-27983794 28 7.6
04_04_1457 - 33741048-33741146,33741647-33741760,33741938-337420... 28 7.6
03_02_0589 + 9673928-9674123,9674557-9674713,9675588-9675669,967... 28 7.6
01_01_0762 + 5889925-5890136,5891110-5891273,5891755-5891878,589... 28 7.6
>09_06_0127 + 21019266-21019670
Length = 134
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -1
Query: 701 SGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSA 579
SGS+T +TG + S A S SS AS RS P P + +A
Sbjct: 44 SGSSTSTTGTTPSAAASGSSSTASSSRSVNAPPPPPTPTAA 84
>08_02_0396 -
16654603-16655030,16655803-16655906,16655988-16656579,
16656820-16656993,16657105-16657309
Length = 500
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 670 DLPVENVAEPEDLSPVQVVNPIVENSQSEYPAKD 771
D PVE++AE PVQ + ++EN+Q + +D
Sbjct: 94 DAPVESIAEEVLEEPVQCLETVIENTQEQPELED 127
>05_03_0288 - 11653136-11654074,11655252-11655965
Length = 550
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +3
Query: 69 VQIADIPIPKYESIDAGMYIIPDEVIQELALAGIELSENVDNVAIFDIEIP 221
V ++ +P+ E + G ++P ++ +A+ G+E+ N V +F P
Sbjct: 109 VMVSFFGLPEKEVVRIGKAVLPKFFLEGMAMEGLEVVRNAKKVVVFSPLFP 159
>07_01_0975 + 8223269-8224354
Length = 361
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -1
Query: 713 GLKSSGSATF-STGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSA 579
G SSG+A+ + G S S A + G +S G + SP PSSS SA
Sbjct: 301 GPSSSGAASGPAEGPSPSGAAGPAEGPSSYGSTEGPSPSPSSSGSA 346
>08_02_1091 +
24256025-24256190,24256806-24257978,24258066-24258733,
24258994-24260065,24260241-24260563,24260647-24260835,
24261400-24261506,24262103-24262163,24262617-24262634
Length = 1258
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -2
Query: 307 VSREIGILNWSFDIFYEVTESTGKSTLSTGISMSKIATLSTFSLNSIPAKASS 149
+ R I NW + Y+V S S+ T S+S I ++ + S+ + +SS
Sbjct: 587 LERRIVTSNWKSSVSYKVHTSVDSSSQRTMSSLSDIIHFNSLRMKSLSSSSSS 639
>08_02_0918 -
22617388-22617693,22617799-22617848,22618538-22618817,
22619654-22620340,22622870-22622944,22623150-22623285,
22624801-22625093,22625776-22626597
Length = 882
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/43 (23%), Positives = 25/43 (58%)
Frame = +3
Query: 48 GRPSIKPVQIADIPIPKYESIDAGMYIIPDEVIQELALAGIEL 176
G P+IK +++ D+ +P++ + I ++++L L ++L
Sbjct: 561 GFPNIKTLRLEDVDVPRHGGKEVAALIAASPLLEDLGLLAVKL 603
>01_07_0374 +
43144861-43144998,43145695-43145794,43146499-43146651,
43147383-43150081
Length = 1029
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +1
Query: 511 VEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPVENV 690
+EK E E D GSIS E +DE N +V ++L + +Q +++ + +E+
Sbjct: 419 LEKIKEHFERD---GSISVAEITEHIDELVNKVVDLELMVSSQSSQIDRLCRENSELESC 475
Query: 691 ---AEPEDLSPVQVVNPIVENSQSE 756
E E++S VN ++ + E
Sbjct: 476 LQSLEEENVSDPDKVNEKLKKLEEE 500
>01_07_0157 -
41547505-41547861,41547949-41548078,41548180-41548469,
41548561-41548742,41548838-41549057,41550806-41550824,
41551104-41551364,41551466-41551584
Length = 525
Score = 28.7 bits (61), Expect = 5.8
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = -1
Query: 782 SVRVSFAGYSL*LFSTM-GLTT*--TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTI 612
SV +FA +S + S M G+TT TGL+ G + + G AF+ GC ++ + I
Sbjct: 40 SVLSNFA-FSFSIISVMAGVTTTYSTGLRYGGPVSMTLGWLVVSAFN---GCMALSMAEI 95
Query: 611 TSPFPSSSNSAGYSTQL 561
S +P+S +S +L
Sbjct: 96 CSAYPTSGGLYYWSAKL 112
>10_02_0030 + 4350970-4351165,4351502-4351723,4351889-4352502
Length = 343
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +2
Query: 467 DADLQVAPVNIVDEQ---LKRRMRKSRMTV-KLARSAGLNILLNWTKMETDLLLLIY 625
D ++ A NI+D+Q L+ R+ + V KLA SA + W + TD+ LI+
Sbjct: 79 DEEIICAHPNIIDKQQPSLETRVEIAATEVPKLAESAARKAIAEWGRPATDITHLIF 135
>09_01_0137 +
2063881-2063934,2066218-2066448,2066656-2067249,
2067980-2068639,2068910-2069164
Length = 597
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/101 (20%), Positives = 40/101 (39%)
Frame = -1
Query: 422 PGHRRPQLEHRRCLRSLQNQPGHRRPQLEHRGFLRSLQSQPGNRHSQLELRHFLRSYRIN 243
PG P + + + ++N PG P +E R LQS P + + +
Sbjct: 150 PGKSTPVMALKTSMEDVKNCPGPHPPIIESRASRCELQSAPWPTNRTGTKVQLMSPWPHP 209
Query: 242 REIDVVNGNFNVKNRNVVYIFAQFNPGQGEFLNDFVGDDVH 120
+++DV+ N +++ G +F D +G+ H
Sbjct: 210 KQMDVIVSNIDLQPMPWPSFNFYLIKGHQDFF-DAIGESYH 249
>05_07_0140 - 27982037-27983794
Length = 585
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -1
Query: 506 HPRCSQGRLVNRRPQLEHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQPGHRRP 345
HPR N+RPQL R R + + R + E R R QN H P
Sbjct: 101 HPRFGPKWRFNQRPQLPQR---RDEEVEARRREAEKERARRERHFQNNRSHHHP 151
>04_04_1457 - 33741048-33741146,33741647-33741760,33741938-33742052,
33742154-33742560,33743342-33743476,33743576-33743970,
33744225-33744916,33745014-33745097,33745195-33745286,
33745374-33745457,33745535-33745714,33746258-33746302,
33746399-33746692,33747199-33747585,33747713-33747899,
33748042-33748118,33748936-33749067,33749315-33749416,
33749744-33749827,33749902-33749992,33750105-33750178,
33750644-33750664,33751433-33751477,33752427-33752561,
33752693-33752752
Length = 1376
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -1
Query: 704 SSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYSTQLI 558
SSG T + G STS A S+++ G S + + P S+ S+G Q++
Sbjct: 985 SSGPTTSNEGASTSGAASQTASGVLSG-SGVLNARPGSTTSSGLLAQMV 1032
>03_02_0589 +
9673928-9674123,9674557-9674713,9675588-9675669,
9675759-9675806,9676566-9676666,9676871-9676979,
9677004-9677093
Length = 260
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +1
Query: 559 ISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEK----AQLVDLPVENVAEPEDLSPVQVV 726
IS E+ + DG +++ +P A PED+E+ + P E+ P P++VV
Sbjct: 146 ISREEFDLKQSYDGKAILLQGVPRNAVPEDIERFLCGTNVEPPPFESFLRPGVPDPIRVV 205
>01_01_0762 +
5889925-5890136,5891110-5891273,5891755-5891878,
5891941-5892073,5892629-5892732,5892867-5895780,
5895876-5895965,5896251-5896355,5896633-5896740,
5896826-5896876
Length = 1334
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +1
Query: 571 EYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPVENVAEPEDLSPVQVVNPIVENSQ 750
E P+E D + L ++ E +PE K+++ +P NV P+ +V ++S
Sbjct: 426 EVPSETDNYVDALNTLESETETEPELQTKSRVKPVPSLNVDVPQVELIDNIVTESPDSSV 485
Query: 751 SEYP 762
+E+P
Sbjct: 486 AEFP 489
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,643,535
Number of Sequences: 37544
Number of extensions: 431032
Number of successful extensions: 1426
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1424
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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