Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0851
(806 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98) 33 0.21
SB_41181| Best HMM Match : DUF164 (HMM E-Value=2.1) 33 0.36
SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38) 31 1.1
SB_36252| Best HMM Match : IQ (HMM E-Value=2.7e-35) 30 1.9
SB_29219| Best HMM Match : 7tm_1 (HMM E-Value=9.8e-06) 30 2.5
SB_34113| Best HMM Match : PSD5 (HMM E-Value=3.3) 30 2.5
SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 29 4.4
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_38331| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_7844| Best HMM Match : RasGEF (HMM E-Value=0.00058) 29 5.9
SB_10311| Best HMM Match : S-antigen (HMM E-Value=0.73) 29 5.9
SB_4140| Best HMM Match : ANF_receptor (HMM E-Value=0.013) 29 5.9
SB_56345| Best HMM Match : Integrin_alpha (HMM E-Value=0.00047) 28 7.7
SB_32544| Best HMM Match : Extensin_2 (HMM E-Value=0.0062) 28 7.7
SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07) 28 7.7
>SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98)
Length = 242
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +2
Query: 263 ENVEAPVENADFPA-DSVSFVENLDAPVEDADVLAD 367
E VEAPVE + P ++V+ VE + P+E+A+ A+
Sbjct: 165 EEVEAPVEEVEAPVEEAVASVEEAEVPIEEAETQAE 200
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/31 (45%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +2
Query: 263 ENVEAPVENADFPADSV-SFVENLDAPVEDA 352
+ VEAP+E A+ P + V + VE ++AP+E+A
Sbjct: 33 KKVEAPIEEAEAPEEEVEATVEEVEAPMEEA 63
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/86 (25%), Positives = 36/86 (41%)
Frame = +1
Query: 511 VEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPVENV 690
VE T EE+E E + S E +++ V + P+E E+A+ D E
Sbjct: 49 VEATVEEVEAPMEEAAASVEEAEVPIEKAETQPVDTEGPVENAETSFEEAEAADEETEEP 108
Query: 691 AEPEDLSPVQVVNPIVENSQSEYPAK 768
+ + S + P+VE + AK
Sbjct: 109 VKEAEGSFEEAEAPVVETEEPVKEAK 134
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 260 VENVEAPVENADFPADSVSFVENLDAPVEDADVLADSV 373
VE EAP+E A P S VE +AP E+ + + V
Sbjct: 137 VEITEAPIEEAKAPERVESSVEEAEAPEEEVEAPVEEV 174
>SB_41181| Best HMM Match : DUF164 (HMM E-Value=2.1)
Length = 258
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/84 (22%), Positives = 45/84 (53%)
Frame = +3
Query: 3 LQNEIANCPRTHWSGGRPSIKPVQIADIPIPKYESIDAGMYIIPDEVIQELALAGIELSE 182
+Q E++N P+ G +++ ++ D+P ++ + +P+E + ++ + I + E
Sbjct: 95 VQEEMSNAPK-----GSINVQE-EMTDVPEGSI-NVQEAITDVPEEEVNDVPVDSINVQE 147
Query: 183 NVDNVAIFDIEIPVDNVDFPVDSV 254
+++V + I I + D PVDS+
Sbjct: 148 EMNDVPVGSINIQEEMNDVPVDSI 171
>SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38)
Length = 641
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -1
Query: 428 NQPGHRRPQLEHRRCLRSLQNQ--PGHRRPQLEHRGFLRSLQSQPGNRHSQLELRHFLR 258
NQ H++ Q +H R + QNQ H++ Q +H + Q+Q +RH + + +H R
Sbjct: 568 NQHHHQKQQNQHHRHHQKQQNQHHRHHQKKQNQHYRHHQKQQNQHHHRHRKQQNQHHHR 626
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -1
Query: 458 EHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQ--PGHRRPQLEHRGFLRSLQSQPGNRH 288
+H + Q+ H++ Q +H R + QNQ H++ Q +H R Q+Q +RH
Sbjct: 569 QHHHQKQQNQHHRHHQKQQNQHHRHHQKKQNQHYRHHQKQQNQHHHRHRKQQNQHHHRH 627
>SB_36252| Best HMM Match : IQ (HMM E-Value=2.7e-35)
Length = 442
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 272 EAPVENADFPA-DSVSFVENLDAPVEDADVLADS 370
+AP + D PA D+ + E+ D P EDAD D+
Sbjct: 384 DAPADTTDTPAEDADTPAEDADTPAEDADTATDA 417
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 263 ENVEAPVENADFPA-DSVSFVENLDAPVEDADVLAD 367
E+ + P E+AD PA D+ + + +APVE +D AD
Sbjct: 395 EDADTPAEDADTPAEDADTATDAAEAPVEASDPPAD 430
>SB_29219| Best HMM Match : 7tm_1 (HMM E-Value=9.8e-06)
Length = 863
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -1
Query: 704 SSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGY 573
SS S++ S+ S+S + S SS +S S+ +S SSS S GY
Sbjct: 589 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSASLGY 632
>SB_34113| Best HMM Match : PSD5 (HMM E-Value=3.3)
Length = 851
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 616 VDLPIEAQPEDLEKAQLVDLPVENVAEPEDLSPVQVVNPIVENSQSEYPAKDTR 777
V P E QP ++++ + E+V + SP Q ++ S SE PA++ R
Sbjct: 28 VSFPRELQPSEIQRKE-ASASRESVQTSDSESPAQEGRQSIQTSDSESPAQEGR 80
>SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -1
Query: 485 RLVNRRPQLEHRRCLRS*QNQPG-H-RRPQLEHRRCLRSLQNQPGHRRPQLEHR 330
RL RRP+L HRR R +P H RRP+L RR + HRR HR
Sbjct: 163 RLHTRRPRL-HRRRTRLHTRRPRLHTRRPRLHRRRPRLHTRRPRRHRRRPRLHR 215
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 29 SHSLER-RPPINQTRPNRGYPNTEIRKHRRWNVHHPRRSHSRTRLGRD*IERKCRQR 196
S S R R P P R +++R H RSHSR+R R R R+R
Sbjct: 242 SRSARRSRSPQKSRSPQRSRSPRSSKRYRSSRSHRKHRSHSRSRSPRSKRSRSPRKR 298
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Frame = +2
Query: 260 VENVEAPVENADFPADSV--------SFVENLDAPVEDADVLADSVNFXXXXXXXXXXXX 415
V+ EAPVE A+ PA+ + VE +AP+E+A+ + V
Sbjct: 1097 VKEAEAPVEEAEAPAEETEEPVKEAEASVEITEAPIEEAEAPDERVESSVEEAEAPEEEV 1156
Query: 416 XXXXXXXFVDNVDAPVEDADLQVAPVNIVDEQLKRRMRKSRMTVKLARSA 565
V+ V+APVE+A V + E+ + + + V+ A ++
Sbjct: 1157 KAP-----VEEVEAPVEEAVASVEEAEVPIEEAETQAEDTEGPVEDAEAS 1201
>SB_38331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 664 LVDLPVENVAEPEDLSPVQVVNPIVENSQSEYPAKDTRTLHGDK 795
+VDL N+ + +SP QV + + SQS PA D T G +
Sbjct: 8 MVDL-AGNLTNDKTISPAQVQDQHLSTSQSHLPANDKLTPQGQE 50
>SB_7844| Best HMM Match : RasGEF (HMM E-Value=0.00058)
Length = 1299
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/81 (19%), Positives = 32/81 (39%)
Frame = +1
Query: 532 IENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPVENVAEPEDLS 711
++ND EV ++ P + +++G+G P++ E + + L P S
Sbjct: 293 VQNDQEVSGNTYDTAPVQNEQEGSGNTDGTAPVQNDQEGFDSKDSLGLGCSEADHPTTSS 352
Query: 712 PVQVVNPIVENSQSEYPAKDT 774
Q V ++ + DT
Sbjct: 353 QTQDVCDTSDSQHQSQQSLDT 373
>SB_10311| Best HMM Match : S-antigen (HMM E-Value=0.73)
Length = 617
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -1
Query: 422 PGHRRPQLEHRRCLRSLQNQPGHRRP-QLEHRGFLRSLQSQPGNRHSQLELRHFLRSYRI 246
PG + +L+ + C +++ QP + R L LRS + P + + + L +S+RI
Sbjct: 221 PGRQLLELQEKTCQQAVLLQPSNNRSLYLLGDAQLRSYDNDPASDNGKSLLNEAEQSFRI 280
Query: 245 NREID 231
+ E++
Sbjct: 281 SIELE 285
>SB_4140| Best HMM Match : ANF_receptor (HMM E-Value=0.013)
Length = 472
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 102 ESIDAGMYIIPDEVIQELALAGIELSENVDNVAIFD--IEIPVDNVDFPVDSV 254
ES+D + ++ D V ++ + + DNVA+ D + + VD V VD+V
Sbjct: 399 ESVDDNVAVVVDIVDDDVDSVSVVVESVDDNVAVVDDNVSVVVDGVAVVVDNV 451
>SB_56345| Best HMM Match : Integrin_alpha (HMM E-Value=0.00047)
Length = 594
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 569 LNILLNWTKMETDLLLLIYLLR-HNPKI*RKPSLLTFPSKMSLNQKT 706
+ + L W K E DL L+YLL KP++L S++ N++T
Sbjct: 395 VTVSLPWKKSEEDLSYLLYLLSVQMSNNTDKPAVLESTSRVGANKRT 441
>SB_32544| Best HMM Match : Extensin_2 (HMM E-Value=0.0062)
Length = 282
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +3
Query: 279 QLRMPISRLTL*AS*KTSMLQLRTPMSWLILXXXXXXXMLQLRTPMSRLILSAS*TTSML 458
Q+R P+ + S L++RTP LQ+R+P + S L
Sbjct: 160 QVRSPLFKSAAFLSSPQPSLRVRTPPFKSAPLFSSPQPSLQVRSPPFKSAAFPSSPQPSL 219
Query: 459 QLRTPIYKS 485
Q+RTP++KS
Sbjct: 220 QVRTPLFKS 228
>SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07)
Length = 493
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +2
Query: 23 LSSHSLERRPPINQTRPNRGYPNTEIRKHRRWNVHHPRRSHSRT 154
LS LERR P ++TRPN P T + P H T
Sbjct: 58 LSMWLLERRAPTHKTRPNYTSPTTNAARIVNEGCTKPASEHDVT 101
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,700,854
Number of Sequences: 59808
Number of extensions: 497450
Number of successful extensions: 1932
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1917
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2239700683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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