Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0851
(806 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.24
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 31 1.3
AF016445-4|AAC69058.1| 312|Caenorhabditis elegans Hypothetical ... 31 1.3
Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 29 3.9
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 29 3.9
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 29 3.9
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 29 3.9
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 29 3.9
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 29 3.9
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 5.2
AL033514-6|CAA22096.2| 373|Caenorhabditis elegans Hypothetical ... 29 5.2
AF106573-3|AAF02106.1| 198|Caenorhabditis elegans Hypothetical ... 29 5.2
AF016445-5|AAC69059.1| 250|Caenorhabditis elegans Hypothetical ... 29 5.2
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 28 6.8
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 6.8
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 6.8
U41547-5|AAX88831.1| 272|Caenorhabditis elegans C.elegans homeo... 28 9.0
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = -1
Query: 740 STMGLTT*TGLKSSGSATFSTGRSTSWAFSKSSGCASIGR-----STITSPFPSSSNSAG 576
S+ + + TG SSGS+T + G ST A S +++ ST+T+P SSS S
Sbjct: 1513 SSTSVPSSTGATSSGSST-TVGSSTVGATQTSVSSSTVPNTGSTGSTVTNPSTSSSTSGS 1571
Query: 575 YSTQLI 558
STQ I
Sbjct: 1572 SSTQSI 1577
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/67 (35%), Positives = 34/67 (50%)
Frame = -1
Query: 770 SFAGYSL*LFSTMGLTT*TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSS 591
SF S +T G T TG S GSA STG + + S ++G + G S+ +P P+S
Sbjct: 26 SFGNSSTSTANTGGNTNTTGGFSFGSAQPSTGSTGLFGNSTATG-SMFGGSSAAAPAPAS 84
Query: 590 SNSAGYS 570
+ G S
Sbjct: 85 AGIFGNS 91
>AF016445-4|AAC69058.1| 312|Caenorhabditis elegans Hypothetical
protein T05B4.8 protein.
Length = 312
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 704 SSGSATFSTGRSTSWAFSKSSGCASIGRST 615
+SGS T ++G TS+ SS CAS R+T
Sbjct: 21 TSGSVTVTSGTCTSYIADSSSNCASWARTT 50
>Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 514 EKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPV 681
E T EE N+SEV + + + ED N + + EA E ++ Q D PV
Sbjct: 386 EDTAEETNNESEVEASTEAPFEVAATEDSNQAPVDPIFTEAPAEGSQEEQTSDGPV 441
>Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 514 EKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPV 681
E T EE N+SEV + + + ED N + + EA E ++ Q D PV
Sbjct: 386 EDTAEETNNESEVEASTEAPFEVAATEDSNQAPVDPIFTEAPAEGSQEEQTSDGPV 441
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -1
Query: 716 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYST 567
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS+
Sbjct: 192 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSS 241
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -1
Query: 716 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYST 567
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS+
Sbjct: 192 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSS 241
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -1
Query: 716 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYST 567
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS+
Sbjct: 58 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSS 107
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -1
Query: 716 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYST 567
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS+
Sbjct: 192 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSS 241
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -1
Query: 716 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYST 567
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS+
Sbjct: 192 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSS 241
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -1
Query: 716 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYST 567
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS+
Sbjct: 192 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSS 241
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -1
Query: 716 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYST 567
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS+
Sbjct: 58 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSS 107
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -1
Query: 716 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYST 567
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS+
Sbjct: 192 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSS 241
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = -1
Query: 716 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYST 567
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS+
Sbjct: 192 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSS 241
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = -1
Query: 713 GLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYSTQLI 558
G +SG +T S+S + ++G S G ST+T+P SSS S STQ I
Sbjct: 831 GSSTSGQTAVTTQGSSSTQTNSNTG--STG-STVTNPPVSSSTSGSSSTQPI 879
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = -1
Query: 713 GLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYSTQLI 558
G +SG+ +T S+S + ++G S G ST+T P SS SA STQ I
Sbjct: 887 GSSTSGTTVVTTQGSSSTQTNPNTG--STG-STVTQPSAFSSTSASSSTQPI 935
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = -1
Query: 725 TT*TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYST 567
+T G SSGS T +TG + + S SS S+ S SP PS+S S ST
Sbjct: 1221 STVRGSTSSGS-TVTTGSTEGSSTSGSSSATSLSSS---SPVPSTSQSPNPST 1269
Score = 28.3 bits (60), Expect = 6.8
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = -1
Query: 740 STMGLTT*TGLKSSGSATFSTG-RSTSWAFSKSSGCASI-GRSTITS-PFPSSSNSAGYS 570
ST + T +S+ + S G +ST+ + S SS S G ST+TS P PSS+ S+G
Sbjct: 655 STFSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQ 714
Query: 569 TQLIEPT 549
+ L P+
Sbjct: 715 STLTTPS 721
>AL033514-6|CAA22096.2| 373|Caenorhabditis elegans Hypothetical
protein Y75B8A.6 protein.
Length = 373
Score = 28.7 bits (61), Expect = 5.2
Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 1/109 (0%)
Frame = -1
Query: 653 SKSSGCASIGRSTITSPFPSSSNSAGYSTQLIEPTXXXXXXXXXXXSTVHPRCSQGRLVN 474
S++S + ++ T P PSS N + + T T RC R
Sbjct: 39 SQNSQAPPLQAASATPPVPSSMNRSQSRASCPQSTREMSSHRS----TTSRRCGVCRGCQ 94
Query: 473 RRPQLEHRRCLRS*Q-NQPGHRRPQLEHRRCLRSLQNQPGHRRPQLEHR 330
+P + C S Q PG ++ RRCLR L+N+ P + R
Sbjct: 95 CKPCGQCTYCQDSPQFGGPGVKKQSCIERRCLRVLENRLQRDAPTFKAR 143
>AF106573-3|AAF02106.1| 198|Caenorhabditis elegans Hypothetical
protein F52D2.10 protein.
Length = 198
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +3
Query: 135 DEVIQELALAGIELSENVDNVAIFDIEIPVDNVDFPVDSVTS*KMSKLQ 281
D+V EL +E+ N D+ +F+ +DN+++ +D + K S ++
Sbjct: 61 DKVSMELEETDLEMLLNTDSKVVFNNHSRLDNIEYFIDYLKRSKFSSVK 109
>AF016445-5|AAC69059.1| 250|Caenorhabditis elegans Hypothetical
protein T05B4.9 protein.
Length = 250
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 704 SSGSATFSTGRSTSWAFSKSSGCASIGRS 618
+SGS T ++G TS+ SS CAS R+
Sbjct: 198 ASGSVTVTSGTCTSYIADSSSNCASWSRN 226
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 6.8
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = -1
Query: 740 STMGLTT*TGLKSSGSATFSTG-RSTSWAFSKSSGCASI-GRSTITS-PFPSSSNSAGYS 570
ST + T +S+ + S G +ST+ + S SS S G ST+TS P PSS+ S+G
Sbjct: 448 STFSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQ 507
Query: 569 TQLIEPT 549
+ L P+
Sbjct: 508 STLTTPS 514
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 28.3 bits (60), Expect = 6.8
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = -1
Query: 740 STMGLTT*TGLKSSGSATFSTG-RSTSWAFSKSSGCASI-GRSTITS-PFPSSSNSAGYS 570
ST + T +S+ + S G +ST+ + S SS S G ST+TS P PSS+ S+G
Sbjct: 655 STFSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQ 714
Query: 569 TQLIEPT 549
+ L P+
Sbjct: 715 STLTTPS 721
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 716 TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFP 597
+G SS S+ +S+ +ST +SS +GR T + P P
Sbjct: 37 SGQNSSRSSVYSSSKSTVIEVEQSSRQQQVGRPTESPPLP 76
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 716 TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFP 597
+G SS S+ +S+ +ST +SS +GR T + P P
Sbjct: 259 SGQNSSRSSVYSSSKSTVIEVEQSSRQQQVGRPTESPPLP 298
>U41547-5|AAX88831.1| 272|Caenorhabditis elegans C.elegans homeobox
protein 60 protein.
Length = 272
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = -2
Query: 214 SMSKIATLSTFSLNSIPAKASS*MTSSGMMYIPASMLSYFGIGISAIWTGLIDGRP 47
SM+ A SLNS +SS M++SG++ IP + + I A+ GL+ G P
Sbjct: 214 SMANEAQAIQNSLNSSTVASSSNMSTSGLINIPLVNPTMQSMVIPAVQPGLL-GNP 268
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,586,757
Number of Sequences: 27780
Number of extensions: 374664
Number of successful extensions: 1480
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1478
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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