Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0849
(591 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 38 0.005
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 34 0.100
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 31 0.70
SB_56964| Best HMM Match : Zona_pellucida (HMM E-Value=0) 30 1.2
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 30 1.6
SB_41871| Best HMM Match : YabP (HMM E-Value=0.95) 29 2.8
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 29 3.8
SB_48824| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_33703| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_40851| Best HMM Match : TSP_1 (HMM E-Value=3.4e-09) 28 5.0
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 28 6.6
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 28 6.6
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/82 (34%), Positives = 39/82 (47%)
Frame = +1
Query: 1 CEWSKNVECGTRVVPGEENVNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSG 180
C+ +NV+CG P + P P C + NGK N C+ + MC +G
Sbjct: 486 CDNPENVQCGPTRPPTPK---VPPTTKAPFTKSPFCVGK-QNGKYADANNCNGFVMCSNG 541
Query: 181 KTLSLACPSNLFYDPQKERCDF 246
+ CPSNL YDP K RC++
Sbjct: 542 YIYYMDCPSNLRYDPAKGRCEW 563
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +1
Query: 1 CEWSKNVECGTR--VVPGEENVNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMCV 174
CEW+ V+CG R + P T P P ++ C +E NG + C+ + C
Sbjct: 561 CEWADTVDCGQRPTISPHPPKPTTMPPQPTPPKS-PFC-EEKKNGDYADPSNCNGFITCS 618
Query: 175 SGKTLSLACPSNLFYDPQKERCDFPAKSAAKA 270
+G CP NL +D +K C++P K K+
Sbjct: 619 NGYAYKRDCPFNLKFDTKKLECEWPNKVNCKS 650
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 79 CDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCD 243
C C E S+G C + MC +G T + CP +DP K+RC+
Sbjct: 369 CSGSSGSGFC-HEKSDGNYKDSGNCHGFIMCSNGHTYHMTCPGQTNFDPAKKRCE 422
Score = 35.1 bits (77), Expect = 0.043
Identities = 24/83 (28%), Positives = 31/83 (37%)
Frame = +1
Query: 1 CEWSKNVECGTRVVPGEENVNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSG 180
CEW V C +R P T P P C + G+ HN C Y +C G
Sbjct: 640 CEWPNKVNCKSR--PTTVPYVTKPT--PPSGNSEFCKKNGNGRYRDPHN-CLGYIVCRGG 694
Query: 181 KTLSLACPSNLFYDPQKERCDFP 249
C L ++ +RCD P
Sbjct: 695 NIYFRNCRRGLRFNGVTKRCDLP 717
Score = 33.9 bits (74), Expect = 0.100
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 106 CAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFP 249
CA E S+G + C + C + T + CP NL ++P + CD P
Sbjct: 443 CA-ERSDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTKHCDNP 489
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 115 EGSNGKLVAHNVCSHYHMCVSGKTLSLA-CPSNLFYDPQKERCDFPA 252
E +G + C+ Y C +G T++ CP+ L ++ CD+P+
Sbjct: 318 ERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPS 364
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = +1
Query: 97 LSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPAKSAAKAVL 276
LS + ++G + C Y C +G + CP+ L ++ +K+ CD+P + +
Sbjct: 82 LSTICKNRADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAPCEGWY 141
Query: 277 HQCSYPHSTNI 309
+ + HS ++
Sbjct: 142 YTLFHSHSVHL 152
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +1
Query: 61 NTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERC 240
N P P + CA + ++G CS Y+ C G++ CP L ++ + C
Sbjct: 213 NIPPGKATPAEDEKFCAGK-TDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIKSC 271
Query: 241 DFPAK 255
D P+K
Sbjct: 272 DEPSK 276
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 33.9 bits (74), Expect = 0.100
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Frame = +1
Query: 103 LCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERC--DFPAKSAAKAVL 276
LCA + L C HY+ C GK + C +DP+ C D+ K
Sbjct: 21 LCADKPHGAYLPDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNWDWAYKCVGTPAP 80
Query: 277 HQCSYPHSTN 306
+Y STN
Sbjct: 81 SVDTYMTSTN 90
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 151 CSHYHMCV-SGKTLSLACPSNLFYDPQKERCDFPAKSAAKAVLHQCSYPHSTNIWKHDKT 327
C+ ++ C S ++L CP L + K+ CD+P L CS P + + T
Sbjct: 582 CAQFYFCYGSAESLLSRCPRGLLWSVVKKTCDYPH-------LVDCSRPTTPPVTTTKST 634
Query: 328 SDTTFKG 348
+ +T KG
Sbjct: 635 TSSTTKG 641
Score = 31.5 bits (68), Expect = 0.53
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +1
Query: 16 NVECGTRVVPGEENVNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMC-VSGKTLS 192
N + V PG E VN G C + C ++ +G CS ++ C S KT
Sbjct: 1319 NPDGSCTVAPGYEVVN-GMC-----VDTTFC-KDRPHGHYADPRDCSRFYQCDASHKTFL 1371
Query: 193 LACPSNLFYDPQKERCDFP 249
CP L + +K CD P
Sbjct: 1372 HRCPDGLKWSVKKTACDLP 1390
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 124 NGKLVAHNVCSHYHMCVS-GKTLSLACPSNLFYDPQKERCDFP 249
NG CS ++ C + KT CP+ L + +K CD+P
Sbjct: 1143 NGHYADPRDCSRFYQCDAFHKTFLHRCPAGLKWSVKKTACDWP 1185
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 16 NVECGTRVVPGEENVNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSL 195
N + V PG E VN G C + C ++ NG CS ++ C + L
Sbjct: 864 NPDGSCTVAPGYEVVN-GMC-----VDTTFC-KDKPNGHYADPRDCSKFYQCDAFHRAFL 916
Query: 196 -ACPSNLFYDPQKERCDFP 249
CP+ L + +K CD+P
Sbjct: 917 HRCPAGLKWSVKKTACDWP 935
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 112 QEGSNGKLVAHNVCSHYHMCVSGKTLSL-ACPSNLFYDPQKERCDFP 249
+E NG CS ++ C + L CP+ L + +K CD+P
Sbjct: 1239 KEKPNGHYADPRDCSRFYQCDAFHRAFLHRCPAGLKWSVKKTACDWP 1285
Score = 27.9 bits (59), Expect = 6.6
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
Frame = +1
Query: 1 CEWSKNVECGTRVVPGEENVNTGPCNCDPKQALSL-CAQEGSNGK-LVAHNVCSHYHMCV 174
C+W +NV+C R P + P PK A L C +G VA MCV
Sbjct: 827 CDWPRNVDC-DRKTPTPPSPT--PPTTTPKPACDLHCQTLNPDGSCTVAPGYEVVNGMCV 883
Query: 175 SGKTLSLACPSNLFYDPQKERCDFPAKSAAKAVLHQC 285
T P+ + DP+ + + +A LH+C
Sbjct: 884 D-TTFCKDKPNGHYADPRDCSKFYQCDAFHRAFLHRC 919
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +1
Query: 100 SLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPAKSAAKAVLH 279
S C + +NG C Y C + T CP+ L ++ K+ CD+P + +
Sbjct: 60 SFCKKR-ANGDYAHPENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAPCE---E 115
Query: 280 QCSY 291
+C Y
Sbjct: 116 KCQY 119
>SB_56964| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 908
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +1
Query: 25 CGTRVVPGEENV-NTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSL 195
C TR+ N G C+ D + + G GK CS+Y+ C +G T L
Sbjct: 187 CETRICSYNNPCDNGGSCSVDGSGDYNCACRPGFTGKNCETATCSNYNPCYNGGTCGL 244
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +1
Query: 94 ALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPAKSAAK 267
++S Q+ ++G + C Y C +G + CP+ L ++ + CD A AK
Sbjct: 331 SVSNFCQDKADGNYAHPSKCDMYITCSNGIAHEMPCPAGLNWNDVTKECDGRATLLAK 388
>SB_41871| Best HMM Match : YabP (HMM E-Value=0.95)
Length = 183
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +2
Query: 74 VTVIRNRHYLYVL--KKVRTANL*PIMCVATITCASAVKHYHSLVRLIFSMILKRNDAIF 247
++ IR +H++Y+L +K R I CV T +K SL+R +N A+F
Sbjct: 89 ISTIRPKHFVYILCRRKARNNLKRLIFCVKISTSHQPIKKAESLIR-------SKNSALF 141
Query: 248 LLS-QLRRPCCTSVPTPT 298
S L + SV PT
Sbjct: 142 FYSFTLIQKTFRSVKLPT 159
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 148 VCSHYHMCVSGKTLSLACPSNLFY 219
VC H C +G T + CPS +Y
Sbjct: 30 VCVRGHYCPAGTTREIPCPSGTYY 53
>SB_48824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 55 NVNTGPCNCDPKQALSLCAQEG-SNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQ 228
++N GP + K LC+ E ++ + N YH + S +CPSN P+
Sbjct: 111 SINIGPLSATGKHECQLCSSEHVTHPNDLVPNSHYEYHPVENNVCYSSSCPSNATCKPR 169
>SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2532
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 271 VLHQCSYPHSTNIWKHDKTSDTTFKGLYEKL 363
+L+ CS PHS +IW D + F+ + EKL
Sbjct: 1160 ILNSCSKPHSLSIWIRD---ELIFQKMKEKL 1187
>SB_33703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +1
Query: 145 NVCSHYHMCVS-GKTLSLACPSN-LFYDPQKERCDFPAKSAAKAVLHQCSYPHSTNIWK 315
++C +CV+ G L L+ +N + Q E CD +K Q SY H IW+
Sbjct: 676 DICPRCGVCVNTGGLLKLSLRNNKVLRRAQTEECDKMDGKPSKTQNLQRSYSHCLGIWR 734
>SB_40851| Best HMM Match : TSP_1 (HMM E-Value=3.4e-09)
Length = 925
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -1
Query: 183 FTADAHVIVATHIMGYKFAVRTFLST*R*CLFRITVTRTSIDVFLTWNDSS 31
FTA +H+ AT +M RTF T R L T RT+ V+ T++ +S
Sbjct: 373 FTASSHLDNATELMTTSTVYRTFSMTSR--LENATELRTASTVYRTFSTTS 421
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 151 CSHYHMCVS-GKTLSLACPSNLFYDPQKERCDFP 249
CS ++ C + K +CPS L + K CD+P
Sbjct: 129 CSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWP 162
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 151 CSHYHMCVS-GKTLSLACPSNLFYDPQKERCDFP 249
CS ++ C + K +CPS L + K CD+P
Sbjct: 36 CSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWP 69
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 151 CSHYHMCVSGKTLSLACPSNLFYDP-QKERC 240
C+ H C G + + CPS + D QK+ C
Sbjct: 266 CTKGHYCPKGTSAPVKCPSGSYQDELQKDSC 296
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,886,018
Number of Sequences: 59808
Number of extensions: 325197
Number of successful extensions: 793
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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