SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0849
         (591 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z85995-1|CAI42721.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog...    31   4.0  
Z83823-1|CAI42742.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog...    31   4.0  
Z81008-1|CAI42710.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog...    31   4.0  
AL031075-1|CAI43065.1| 2725|Homo sapiens odz, odd Oz/ten-m homol...    31   4.0  
AL023878-1|CAI42975.1| 2725|Homo sapiens odz, odd Oz/ten-m homol...    31   4.0  
AL022718-3|CAI42154.1| 2725|Homo sapiens odz, odd Oz/ten-m homol...    31   4.0  
AF100772-1|AAF04723.1| 2725|Homo sapiens tenascin-M1 protein.          31   4.0  
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)...    30   5.3  
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro...    30   5.3  
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros...    30   5.3  
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros...    30   5.3  
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros...    30   5.3  
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros...    30   5.3  
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros...    30   5.3  
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros...    30   5.3  
AL050329-2|CAB99359.1|  399|Homo sapiens protein ( Human DNA seq...    30   5.3  
AF283408-1|AAL38109.1| 1537|Homo sapiens candidate tumor suppres...    30   5.3  
AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein...    30   5.3  
AC068195-1|AAX93243.1| 1126|Homo sapiens unknown protein.              30   5.3  
AB209707-1|BAD92944.1| 1720|Homo sapiens low density lipoprotein...    30   5.3  
X76061-1|CAA53661.1| 1139|Homo sapiens 130K protein protein.           30   7.0  
X74594-1|CAA52671.1| 1082|Homo sapiens Rb2/p130 protein protein.       30   7.0  
S67171-1|AAB29227.1| 1139|Homo sapiens p130 protein.                   30   7.0  
BC034490-1|AAH34490.1| 1139|Homo sapiens retinoblastoma-like 2 (...    30   7.0  
BC035749-1|AAH35749.1|  430|Homo sapiens chromosome 13 open read...    29   9.3  
AL512506-3|CAM22539.1|  430|Homo sapiens novel protein protein.        29   9.3  
AL512506-2|CAM22538.1|  164|Homo sapiens novel protein protein.        29   9.3  
AK096044-1|BAC04686.1|  430|Homo sapiens protein ( Homo sapiens ...    29   9.3  

>Z85995-1|CAI42721.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
           1(Drosophila) protein.
          Length = 2725

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 58  VNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCS 156
           ++ G C+CDPK   S C+ E    +  +H VCS
Sbjct: 674 LDAGVCSCDPKWTGSDCSTELCTMECGSHGVCS 706


>Z83823-1|CAI42742.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
           1(Drosophila) protein.
          Length = 2725

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 58  VNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCS 156
           ++ G C+CDPK   S C+ E    +  +H VCS
Sbjct: 674 LDAGVCSCDPKWTGSDCSTELCTMECGSHGVCS 706


>Z81008-1|CAI42710.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
           1(Drosophila) protein.
          Length = 2725

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 58  VNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCS 156
           ++ G C+CDPK   S C+ E    +  +H VCS
Sbjct: 674 LDAGVCSCDPKWTGSDCSTELCTMECGSHGVCS 706


>AL031075-1|CAI43065.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
           1(Drosophila) protein.
          Length = 2725

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 58  VNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCS 156
           ++ G C+CDPK   S C+ E    +  +H VCS
Sbjct: 674 LDAGVCSCDPKWTGSDCSTELCTMECGSHGVCS 706


>AL023878-1|CAI42975.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
           1(Drosophila) protein.
          Length = 2725

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 58  VNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCS 156
           ++ G C+CDPK   S C+ E    +  +H VCS
Sbjct: 674 LDAGVCSCDPKWTGSDCSTELCTMECGSHGVCS 706


>AL022718-3|CAI42154.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
           1(Drosophila) protein.
          Length = 2725

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 58  VNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCS 156
           ++ G C+CDPK   S C+ E    +  +H VCS
Sbjct: 674 LDAGVCSCDPKWTGSDCSTELCTMECGSHGVCS 706


>AF100772-1|AAF04723.1| 2725|Homo sapiens tenascin-M1 protein.
          Length = 2725

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 58  VNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCS 156
           ++ G C+CDPK   S C+ E    +  +H VCS
Sbjct: 674 LDAGVCSCDPKWTGSDCSTELCTMECGSHGVCS 706


>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
            protein.
          Length = 3110

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 55   NVNTGPCNCDPKQALSLCAQ 114
            NVNTG CNC PK + + C +
Sbjct: 1073 NVNTGQCNCHPKFSGAKCTE 1092


>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain protein.
          Length = 3110

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 55   NVNTGPCNCDPKQALSLCAQ 114
            NVNTG CNC PK + + C +
Sbjct: 1073 NVNTGQCNCHPKFSGAKCTE 1092


>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
            congenital muscular dystrophy) protein.
          Length = 3122

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 55   NVNTGPCNCDPKQALSLCAQ 114
            NVNTG CNC PK + + C +
Sbjct: 1073 NVNTGQCNCHPKFSGAKCTE 1092


>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
            congenital muscular dystrophy) protein.
          Length = 3122

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 55   NVNTGPCNCDPKQALSLCAQ 114
            NVNTG CNC PK + + C +
Sbjct: 1073 NVNTGQCNCHPKFSGAKCTE 1092


>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
            congenital muscular dystrophy) protein.
          Length = 3122

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 55   NVNTGPCNCDPKQALSLCAQ 114
            NVNTG CNC PK + + C +
Sbjct: 1073 NVNTGQCNCHPKFSGAKCTE 1092


>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
            congenital muscular dystrophy) protein.
          Length = 3122

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 55   NVNTGPCNCDPKQALSLCAQ 114
            NVNTG CNC PK + + C +
Sbjct: 1073 NVNTGQCNCHPKFSGAKCTE 1092


>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
            congenital muscular dystrophy) protein.
          Length = 3122

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 55   NVNTGPCNCDPKQALSLCAQ 114
            NVNTG CNC PK + + C +
Sbjct: 1073 NVNTGQCNCHPKFSGAKCTE 1092


>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
            congenital muscular dystrophy) protein.
          Length = 3122

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 55   NVNTGPCNCDPKQALSLCAQ 114
            NVNTG CNC PK + + C +
Sbjct: 1073 NVNTGQCNCHPKFSGAKCTE 1092


>AL050329-2|CAB99359.1|  399|Homo sapiens protein ( Human DNA
           sequence from clone RP1-22I17 on chromosome 6q11.1-12
           Contains the 3' end of the PHF3 gene for PHD finger
           protein 3.  ).
          Length = 399

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +1

Query: 46  GEENVN--TGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLAC 201
           GE  VN  T  C C P  A + C Q  S      +N+C H  +C+  ++ S +C
Sbjct: 143 GECTVNGTTFSCRCLPDWAGNTCNQSVS----CLNNLCLHQSLCIPDQSFSYSC 192


>AF283408-1|AAL38109.1| 1537|Homo sapiens candidate tumor suppressor
           protein protein.
          Length = 1537

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 133 LVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERC 240
           ++ +  CSH  +   GKT + ACP+N +       C
Sbjct: 602 MINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRTC 637


>AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein
            receptor related protein-deleted in tumor protein.
          Length = 4599

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 133  LVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERC 240
            ++ +  CSH  +   GKT + ACP+N +       C
Sbjct: 3278 MINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRTC 3313


>AC068195-1|AAX93243.1| 1126|Homo sapiens unknown protein.
          Length = 1126

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 133 LVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERC 240
           ++ +  CSH  +   GKT + ACP+N +       C
Sbjct: 136 MINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRTC 171


>AB209707-1|BAD92944.1| 1720|Homo sapiens low density
           lipoprotein-related protein 1B variant protein.
          Length = 1720

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 133 LVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERC 240
           ++ +  CSH  +   GKT + ACP+N +       C
Sbjct: 399 MINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRTC 434


>X76061-1|CAA53661.1| 1139|Homo sapiens 130K protein protein.
          Length = 1139

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 215 SMILKRNDAIFLLSQLRRPCCTSVPTPTQQTFGSTTKHQTLLLKDSMKNFLENFNR 382
           S  L+ ND  +L   L   C  SVPT ++ T        T +LK S ++ +E FN+
Sbjct: 76  SYTLEGNDLHWLACALYVACRKSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNK 131


>X74594-1|CAA52671.1| 1082|Homo sapiens Rb2/p130 protein protein.
          Length = 1082

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 215 SMILKRNDAIFLLSQLRRPCCTSVPTPTQQTFGSTTKHQTLLLKDSMKNFLENFNR 382
           S  L+ ND  +L   L   C  SVPT ++ T        T +LK S ++ +E FN+
Sbjct: 19  SYTLEGNDLHWLACALYVACRKSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNK 74


>S67171-1|AAB29227.1| 1139|Homo sapiens p130 protein.
          Length = 1139

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 215 SMILKRNDAIFLLSQLRRPCCTSVPTPTQQTFGSTTKHQTLLLKDSMKNFLENFNR 382
           S  L+ ND  +L   L   C  SVPT ++ T        T +LK S ++ +E FN+
Sbjct: 76  SYTLEGNDLHWLACALYVACRKSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNK 131


>BC034490-1|AAH34490.1| 1139|Homo sapiens retinoblastoma-like 2
           (p130) protein.
          Length = 1139

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 215 SMILKRNDAIFLLSQLRRPCCTSVPTPTQQTFGSTTKHQTLLLKDSMKNFLENFNR 382
           S  L+ ND  +L   L   C  SVPT ++ T        T +LK S ++ +E FN+
Sbjct: 76  SYTLEGNDLHWLACALYVACRKSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNK 131


>BC035749-1|AAH35749.1|  430|Homo sapiens chromosome 13 open reading
           frame 31 protein.
          Length = 430

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +1

Query: 97  LSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFY--DPQKERCDFPAKSAAKA 270
           L L +Q+  +  L+       YH     K L + C SN+ Y  D +++ C+    +   A
Sbjct: 12  LKLNSQKNCHQTLLKTLNAVQYHHAAKAKFLCIMCCSNISYERDGEQDNCEIETSNGLSA 71

Query: 271 VLHQ 282
           +L +
Sbjct: 72  LLEE 75


>AL512506-3|CAM22539.1|  430|Homo sapiens novel protein protein.
          Length = 430

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +1

Query: 97  LSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFY--DPQKERCDFPAKSAAKA 270
           L L +Q+  +  L+       YH     K L + C SN+ Y  D +++ C+    +   A
Sbjct: 12  LKLNSQKNCHQTLLKTLNAVQYHHAAKAKFLCIMCCSNISYERDGEQDNCEIETSNGLSA 71

Query: 271 VLHQ 282
           +L +
Sbjct: 72  LLEE 75


>AL512506-2|CAM22538.1|  164|Homo sapiens novel protein protein.
          Length = 164

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +1

Query: 97  LSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFY--DPQKERCDFPAKSAAKA 270
           L L +Q+  +  L+       YH     K L + C SN+ Y  D +++ C+    +   A
Sbjct: 12  LKLNSQKNCHQTLLKTLNAVQYHHAAKAKFLCIMCCSNISYERDGEQDNCEIETSNGLSA 71

Query: 271 VLHQ 282
           +L +
Sbjct: 72  LLEE 75


>AK096044-1|BAC04686.1|  430|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38725 fis, clone KIDNE2010265. ).
          Length = 430

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +1

Query: 97  LSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFY--DPQKERCDFPAKSAAKA 270
           L L +Q+  +  L+       YH     K L + C SN+ Y  D +++ C+    +   A
Sbjct: 12  LKLNSQKNCHQTLLKTLNAVQYHHAAKAKFLCIMCCSNISYERDGEQDNCEIETSNGLSA 71

Query: 271 VLHQ 282
           +L +
Sbjct: 72  LLEE 75


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,537,920
Number of Sequences: 237096
Number of extensions: 1489810
Number of successful extensions: 2942
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2942
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -