Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0849
(591 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 36 0.016
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 36 0.028
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 35 0.050
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 35 0.050
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 33 0.15
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 32 0.35
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 32 0.35
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical pr... 28 5.7
AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotei... 28 5.7
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 7.5
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 27 7.5
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 27 7.5
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 27 7.5
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 27 7.5
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 7.5
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 7.5
U40060-7|AAA81145.2| 391|Caenorhabditis elegans Hypothetical pr... 27 10.0
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 27 10.0
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 40.7 bits (91), Expect = 8e-04
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Frame = +1
Query: 79 CDPKQALSLCAQEG-SNGKLVAH-------NVCSHYHMCVSGKTLSLACPSNLFYDPQKE 234
CD Q +S C G +NG+ H N C ++ CV G+ + + CPS ++P
Sbjct: 1226 CDYPQKVSGCENHGQTNGECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLS 1285
Query: 235 RCDFPA 252
CD+P+
Sbjct: 1286 VCDWPS 1291
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 36.3 bits (80), Expect = 0.016
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 18/114 (15%)
Frame = +1
Query: 1 CEWSKNV-ECGTRVVPGEENVNTGPCNCDPK--QALSLCAQEG-SNGKLVAHNVC----- 153
C+W NV ECG GEEN +G + + + ++ G S+G + NVC
Sbjct: 68 CDWRHNVFECGEE---GEENEFSGDGSGESSGDEEITFGDSSGESSGDELLENVCESLKD 124
Query: 154 ---------SHYHMCVSGKTLSLACPSNLFYDPQKERCDFPAKSAAKAVLHQCS 288
S Y +C SG L+C + L YDP ++C + K ++ +CS
Sbjct: 125 GVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSW------KGMIDECS 172
Score = 31.1 bits (67), Expect = 0.61
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 106 CAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFP 249
C +G+ K NV + C G CP+NL ++P CD+P
Sbjct: 179 CESDGNISKSECSNV---FFSCSEGIAHRRNCPANLVFNPAISSCDWP 223
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 169 CVSGKTLSLACPSNLFYDPQKERCDF 246
CVSG+ + CP +L Y E CD+
Sbjct: 45 CVSGEARYMDCPEDLVYHKNLEFCDW 70
Score = 28.3 bits (60), Expect = 4.3
Identities = 21/89 (23%), Positives = 37/89 (41%)
Frame = +1
Query: 76 NCDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPAK 255
N +AL+ C NG L A + C +G+ CP +L ++ CD+P +
Sbjct: 300 NYKASEALTPCTNM-DNG-LYALDCTPRVLSCQNGRENIFECPPSLVFNENSLICDYP-E 356
Query: 256 SAAKAVLHQCSYPHSTNIWKHDKTSDTTF 342
++ K + +I +D + D F
Sbjct: 357 TSLKCCMEDALLIRDASIGTYDCSIDGLF 385
Score = 27.5 bits (58), Expect = 7.5
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 154 SHYHMCVSGKTLSLACPSNLFYDPQKERCDF 246
S + C +G + + CP L + + + CD+
Sbjct: 253 SSFSACTNGIPIVMFCPDGLMFSEKNQMCDY 283
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 35.5 bits (78), Expect = 0.028
Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 139 AHNVC-SHYHMCVSGKTLSLACPSNLFYDPQKERCDF 246
A +C S +++C +G+ ++ CP+NL ++P CD+
Sbjct: 583 ASGLCKSVFYICANGQVVATTCPANLIFNPYVGECDY 619
Score = 32.7 bits (71), Expect = 0.20
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +1
Query: 88 KQALSL-CAQEGSNGKLVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPAK-S 258
++A+S+ C S + VC+ +Y+ C +G + CP Y P +RCD+ +
Sbjct: 105 QKAVSINCVGRLSGDYALDKTVCNENYYQCANGISYMRKCPYQQVYVPILKRCDYHTNCN 164
Query: 259 AAKAVLHQCSYPHSTNIWKHDKTSDTT 339
A+ V Q + +++ + D TT
Sbjct: 165 ASGGVKDQAAAAYASPTYDSDNYIVTT 191
Score = 32.7 bits (71), Expect = 0.20
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 154 SHYHMCVSGKTLSLACPSNLFYDPQKERCDFP 249
S+Y C+ + ++CP++L + + E+C FP
Sbjct: 969 SYYFSCIDEQIRKMSCPNSLKFSKESEKCVFP 1000
Score = 32.3 bits (70), Expect = 0.27
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +1
Query: 124 NGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPAKSAAKAVLHQCSYPHST 303
NGK + + C G+ + CP +L ++ CDF A++ K +Y +
Sbjct: 438 NGKYIKEACTKSFFTCHDGRAFANDCPGDLVFNKATGTCDF-AENCEK------NYMEPS 490
Query: 304 NIWKHDKTSDTT 339
I+K + T TT
Sbjct: 491 QIYKGEDTPTTT 502
Score = 31.9 bits (69), Expect = 0.35
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +1
Query: 151 CSHYH-MCVSGKTLSLACPSNLFYDPQKERCDFP 249
CS Y C +GK CP L Y + CDFP
Sbjct: 217 CSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFP 250
Score = 31.5 bits (68), Expect = 0.46
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 151 CSHYHM-CVSGKTLSLACPSNLFYDPQKERCD 243
C Y + C + KT CPS L+Y +++CD
Sbjct: 701 CEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCD 732
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 151 CSHYHM-CVSGKTLSLACPSNLFYDPQKERCDF 246
C Y++ C + +T CP+ LFY RCD+
Sbjct: 800 CEDYYISCNNFETTINRCPAGLFYSKLNNRCDY 832
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 133 LVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCD 243
L A S Y CV+ +CP L++D RC+
Sbjct: 49 LYAVGCSSKYLQCVNNVEYEQSCPEGLYFDRLLARCE 85
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 121 SNGKLVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDF 246
SNG L +CS HY +C +G+ S C + L Y+ + C++
Sbjct: 1028 SNG-LHHLKMCSPHYIVCDNGRAFSGTCIAPLVYNGDTQTCNY 1069
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 151 CS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPAKSAAK 267
CS HY CV+G+ C + LF+ P++ RC PA A+
Sbjct: 537 CSQHYKNCVNGQEAIFICENGLFFSPEQARC-APADQIAE 575
Score = 31.5 bits (68), Expect = 0.46
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 151 CS-HYHMCVSGKTLSLACPSNLFYDPQKERCDF 246
CS HY C +G + + CP+ L +D + CD+
Sbjct: 227 CSDHYTACSNGYLIPMQCPARLAFDEARVICDY 259
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 133 LVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDF 246
L A CS + C G + + CP++L YDP+ C++
Sbjct: 68 LYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEY 106
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 151 CS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPAKSAAK 267
CS HY CV+G+ C + LF+ P++ RC PA A+
Sbjct: 537 CSQHYKNCVNGQEAIFICENGLFFSPEQARC-APADQIAE 575
Score = 31.5 bits (68), Expect = 0.46
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 151 CS-HYHMCVSGKTLSLACPSNLFYDPQKERCDF 246
CS HY C +G + + CP+ L +D + CD+
Sbjct: 227 CSDHYTACSNGYLIPMQCPARLAFDEARVICDY 259
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 133 LVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDF 246
L A CS + C G + + CP++L YDP+ C++
Sbjct: 68 LYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEY 106
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 121 SNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERC 240
S+G N C + +C+S K+ S++CPS L Y + C
Sbjct: 485 SDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYC 524
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 151 CSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPAKS 258
C + CV+G + + CP+ L + CD P S
Sbjct: 578 CLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPS 613
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.35
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 154 SHYHMCVSGKTLSLACPSNLFYDPQKERC 240
++Y C + L+CP+ LFYD ++C
Sbjct: 153 TYYFFCTTNTARFLSCPTPLFYDADSQKC 181
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 169 CVSGKTLSLACPSNLFYDPQKERCDFPAKSAAKAVLHQCSYPHSTNIWKHDKTSDTTF 342
C +G CPS+L ++ Q CD+P +++ K ++ T I D ++D F
Sbjct: 422 CQNGHVDIFECPSSLVFNDQSLICDYP-QTSLKCLIEDTILIDETPIAAFDCSTDGLF 478
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 115 EGSNGKLVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPAKSAAKAVL 276
EG + + VCS ++ C G + CP++L ++P CD+P A A L
Sbjct: 248 EGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGL 302
Score = 28.7 bits (61), Expect = 3.3
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 154 SHYHMCVSGKTLSLACPSNLFYDPQKERCDF 246
S + C +G+ + + CP+ L + RCD+
Sbjct: 322 SSFTACTNGRAIVMFCPAGLKFSESTVRCDY 352
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.35
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 154 SHYHMCVSGKTLSLACPSNLFYDPQKERC 240
++Y C + L+CP+ LFYD ++C
Sbjct: 153 TYYFFCTTNTARFLSCPTPLFYDADSQKC 181
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 169 CVSGKTLSLACPSNLFYDPQKERCDFPAKSAAKAVLHQCSYPHSTNIWKHDKTSDTTF 342
C +G CPS+L ++ Q CD+P +++ K ++ T I D ++D F
Sbjct: 422 CQNGHVDIFECPSSLVFNDQSLICDYP-QTSLKCLIEDTILIDETPIAAFDCSTDGLF 478
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 115 EGSNGKLVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPAKSAAKAVL 276
EG + + VCS ++ C G + CP++L ++P CD+P A A L
Sbjct: 248 EGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGL 302
Score = 28.7 bits (61), Expect = 3.3
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 154 SHYHMCVSGKTLSLACPSNLFYDPQKERCDF 246
S + C +G+ + + CP+ L + RCD+
Sbjct: 322 SSFTACTNGRAIVMFCPAGLKFSESTVRCDY 352
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 133 LVAHNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDF 246
L A CS + C G + + CP++L YDP+ C++
Sbjct: 68 LYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEY 106
>Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical protein
F22E10.3 protein.
Length = 1327
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 307 IWKHDKTSDTTFKGLYEKLLG 369
I++ DK+SD TFKG+ +LG
Sbjct: 1017 IYQGDKSSDDTFKGIIAMMLG 1037
>AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotein
related (146.8 kD)(pgp-14) protein.
Length = 1327
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 307 IWKHDKTSDTTFKGLYEKLLG 369
I++ DK+SD TFKG+ +LG
Sbjct: 1017 IYQGDKSSDDTFKGIIAMMLG 1037
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +1
Query: 1 CEWSKNVECGTRVVPGEENVNTGPCNCDP 87
C+ + CGT + NV G C C P
Sbjct: 2031 CQGCQGCHCGTAAFNTQCNVENGQCTCRP 2059
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +1
Query: 1 CEWSKNVECGTRVVPGEENVNTGPCNCDP 87
C+ + CGT + NV G C C P
Sbjct: 2031 CQGCQGCHCGTAAFNTQCNVENGQCTCRP 2059
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Frame = +1
Query: 10 SKNVECGTRVVPG------EENVNTGPC-NCDPKQALSLCAQEGSNGKLVAHN 147
+K V C + P +E V PC + DPK + L GS+G HN
Sbjct: 623 TKGVSCDQKCDPNTFGFLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEHN 675
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Frame = +1
Query: 10 SKNVECGTRVVPG------EENVNTGPC-NCDPKQALSLCAQEGSNGKLVAHN 147
+K V C + P +E V PC + DPK + L GS+G HN
Sbjct: 623 TKGVSCDQKCDPNTFGFLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEHN 675
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Frame = +1
Query: 10 SKNVECGTRVVPG------EENVNTGPC-NCDPKQALSLCAQEGSNGKLVAHN 147
+K V C + P +E V PC + DPK + L GS+G HN
Sbjct: 623 TKGVSCDQKCDPNTFGFLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEHN 675
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Frame = +1
Query: 10 SKNVECGTRVVPG------EENVNTGPC-NCDPKQALSLCAQEGSNGKLVAHN 147
+K V C + P +E V PC + DPK + L GS+G HN
Sbjct: 623 TKGVSCDQKCDPNTFGFLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEHN 675
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +1
Query: 1 CEWSKNVECGTRVVPGEENVNTGPCNCDP 87
C+ + CGT + NV G C C P
Sbjct: 2031 CQGCQGCHCGTAAFNTQCNVENGQCTCRP 2059
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +1
Query: 1 CEWSKNVECGTRVVPGEENVNTGPCNCDP 87
C+ + CGT + NV G C C P
Sbjct: 2031 CQGCQGCHCGTAAFNTQCNVENGQCTCRP 2059
>U40060-7|AAA81145.2| 391|Caenorhabditis elegans Hypothetical
protein F38B6.7 protein.
Length = 391
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 79 CDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYD 222
CDP + + C + + + V H + + Y+M + KT +L N+FY+
Sbjct: 136 CDPTED-NACPEHFTCEQAVNHQMLTTYNMHLCCKTSTLDSFENVFYE 182
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 27.1 bits (57), Expect = 10.0
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = +1
Query: 151 CSHYHMCVSGKTLSLACPSNLFYDPQKERCD 243
C +++ C SG +C +D K CD
Sbjct: 172 CKNFYQCASGLWTQRSCGEGTIWDQHKLTCD 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,659,319
Number of Sequences: 27780
Number of extensions: 257948
Number of successful extensions: 687
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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