Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0849
         (591 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   1.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   3.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.0  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   3.0  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   3.0  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   5.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   5.2  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   9.0  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   9.0  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 239 AIFLLSQLRRPC 274
           A+FL+ +LRRPC
Sbjct: 65  AVFLVRKLRRPC 76


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 78  VTRTSIDVFLTWND 37
           +TR S+D F T ND
Sbjct: 557 ITRNSLDCFFTMND 570


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 78  VTRTSIDVFLTWND 37
           +TR S+D F T ND
Sbjct: 557 ITRNSLDCFFTMND 570


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = +1

Query: 4   EWSKNVECGTRVVPGEENVNTGPCNCDPKQALSLCA 111
           E  K VEC        EN  +  CN   KQ   L A
Sbjct: 212 EAEKRVECKMEQQGNYENAVSHICNATNKQLFQLVA 247


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = +1

Query: 4   EWSKNVECGTRVVPGEENVNTGPCNCDPKQALSLCA 111
           E  K VEC        EN  +  CN   KQ   L A
Sbjct: 212 EAEKRVECKMEQQGNYENAVSHICNATNKQLFQLVA 247


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 5/28 (17%)
 Frame = +3

Query: 273 VAPVFLP-----PLNKHLEARQNIRHYF 341
           +AP FL      P  KH+E  + IR+Y+
Sbjct: 367 IAPYFLDYNYTIPKEKHVEVARLIRNYY 394


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 5/28 (17%)
 Frame = +3

Query: 273 VAPVFLP-----PLNKHLEARQNIRHYF 341
           +AP FL      P  KH+E  + IR+Y+
Sbjct: 367 IAPYFLDYNYTIPKEKHVEVARLIRNYY 394


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 182 KHYHSLVRLIFSMIL 226
           KH+H  + +I+SM+L
Sbjct: 54  KHFHIGLAIIYSMLL 68


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 182 KHYHSLVRLIFSMIL 226
           KH+H  + +I+SM+L
Sbjct: 54  KHFHIGLAIIYSMLL 68


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,336
Number of Sequences: 438
Number of extensions: 2967
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)