Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0848
(809 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 26 0.47
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 24 1.9
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 24 1.9
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 24 1.9
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 23 2.5
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 3.3
AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. 23 3.3
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 5.8
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 5.8
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 22 5.8
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 22 7.7
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 25.8 bits (54), Expect = 0.47
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -2
Query: 592 KYESIYAEVGCSKN*NI-HMKILHRRMIHFKV*FNLNLYSLHVCEMIFMVLNQYYKIAIF 416
K+ + VG S + ++L R H + + YS CE+ F+ YY I I+
Sbjct: 169 KWNAGLQSVGISNEVELPQFRVLGHRQRHSTIHLSTGNYSRLACEIQFVRSMGYYLIQIY 228
Query: 415 I 413
I
Sbjct: 229 I 229
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.8 bits (49), Expect = 1.9
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 568 VGCSKN*NI-HMKILHRRMIHFKV*FNLNLYSLHVCEMIFMVLNQYYKIAIFI 413
VG S ++ K+L R ++ YS CE+ F+ YY I I+I
Sbjct: 177 VGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 229
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.8 bits (49), Expect = 1.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 400 DAELRFVKFEFHSHWKTLINKKEKLHLIFMN 308
D++ V + H+HW TL K K+ F N
Sbjct: 499 DSKTGGVNLKGHAHWLTLHFKDPKVESAFHN 529
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.8 bits (49), Expect = 1.9
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 568 VGCSKN*NI-HMKILHRRMIHFKV*FNLNLYSLHVCEMIFMVLNQYYKIAIFI 413
VG S ++ K+L R ++ YS CE+ F+ YY I I+I
Sbjct: 116 VGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 168
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 23.4 bits (48), Expect = 2.5
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 587 ILASIFWSYQGV---ELRSENLVA*IRLIFSIYYLQLL 691
+L S++W Y+G+ EL S N R I S+ Y++ L
Sbjct: 66 VLLSVWWDYKGIVYFELLSPN-----RTINSVVYIEQL 98
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 23.0 bits (47), Expect = 3.3
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 746 SNSSHPSCADELVPYSTCVTAVSNIY 669
S HP+CA +L P V++ + Y
Sbjct: 177 SKEEHPTCALDLTPTYAVVSSSISFY 202
>AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein.
Length = 104
Score = 23.0 bits (47), Expect = 3.3
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +2
Query: 677 YLQLLHMCCMGQ-VRQHKTGGNCLRSSCYC 763
+L + H C + + Q + GG+C C C
Sbjct: 73 WLSINHSACAIRCLAQRRKGGSCRNGVCIC 102
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 22.2 bits (45), Expect = 5.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 323 M*FFLLIYKGLPVTVKFKFYKSQLCIRWKFDK 418
M F L +Y PV+ ++ Y S++ +KFDK
Sbjct: 614 MPFQLFLYVS-PVSSEYNQYNSRIWGGYKFDK 644
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 22.2 bits (45), Expect = 5.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 323 M*FFLLIYKGLPVTVKFKFYKSQLCIRWKFDK 418
M F L +Y PV+ ++ Y S++ +KFDK
Sbjct: 614 MPFQLFLYVS-PVSSEYNQYNSRIWGGYKFDK 644
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 487 NLYSLHVCEMIFMVLNQYYKIA 422
N+Y E I++V N+Y KIA
Sbjct: 363 NIYERQNNEYIWIVSNKYQKIA 384
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 21.8 bits (44), Expect = 7.7
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 587 ILASIFWSYQGVELRSENLVA*IRLIFSIYYLQLL 691
+L S++W Y+G+ L+ R I S+ Y++ L
Sbjct: 188 VLLSVWWDYKGIVY--FELLPPNRTINSVVYIEQL 220
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,812
Number of Sequences: 438
Number of extensions: 4387
Number of successful extensions: 28
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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