Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0846
         (834 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ILJ3 Cluster: Putative uncharacterized protein; n=1; ...    36   0.95 
UniRef50_Q4Z391 Cluster: Putative uncharacterized protein; n=4; ...    35   2.2  

>UniRef50_Q8ILJ3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1320

 Score = 36.3 bits (80), Expect = 0.95
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = +1

Query: 295 SFAYLFYLYFIYRVI*FYLRSGRSARQVN*HTDTAQSFLPNLLSGSR 435
           SF YLFYL +I++V+  Y  S  + + +  HT  + S   ++L GS+
Sbjct: 8   SFLYLFYLTYIFKVVIIYCDSSFNRKNIKGHTFDSSSEYIHILRGSQ 54


>UniRef50_Q4Z391 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 1278

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +1

Query: 292 NSFAYLFYLYFIYRVI*FYLRSGRSARQVN*HTDTAQSFLPNLLS 426
           N + Y+FY   I ++   Y  + +S  Q N HTDT  + + NLLS
Sbjct: 109 NYWKYIFYFDSISKIDYQYYNNEQSGNQTNTHTDTKMTMINNLLS 153


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,184,724
Number of Sequences: 1657284
Number of extensions: 13307813
Number of successful extensions: 23095
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23093
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72553824147
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)