Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0845
(838 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 48 7e-06
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 46 5e-05
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 5e-05
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 46 5e-05
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 45 9e-05
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 44 1e-04
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 44 1e-04
SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 43 3e-04
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 43 4e-04
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 42 5e-04
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 42 5e-04
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 42 6e-04
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 41 0.001
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 41 0.001
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.003
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 39 0.006
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.006
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 38 0.008
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.023
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 37 0.023
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.031
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 36 0.031
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 36 0.041
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 36 0.041
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.041
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.054
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.054
SB_59789| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.071
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.12
SB_13844| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.12
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.38
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.66
SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06) 32 0.66
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 31 0.88
SB_48669| Best HMM Match : DUF1298 (HMM E-Value=0.0015) 31 1.5
SB_16479| Best HMM Match : Cyclin_N (HMM E-Value=5.9e-23) 31 1.5
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.0
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.0
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 30 2.7
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40) 30 2.7
SB_58272| Best HMM Match : DUF326 (HMM E-Value=2.2) 29 3.5
SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_46293| Best HMM Match : Keratin_B2 (HMM E-Value=0.00077) 29 6.2
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 29 6.2
SB_14775| Best HMM Match : rve (HMM E-Value=6.6e-15) 29 6.2
SB_3680| Best HMM Match : Keratin_B2 (HMM E-Value=0.0024) 29 6.2
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 28 8.2
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 28 8.2
SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCTS-GRXGVG 694
G+ +G+G +S G T +L ++ V++ C A+P + S LC + G+
Sbjct: 822 GTRCWITGWGRLASGG--TAPDILQQASVPVVSRARCEKAYPGKIHDSMLCAGLDQGGID 879
Query: 695 TCRGDSGGPLVVTRNNR 745
TC+GDSGGP+V R
Sbjct: 880 TCQGDSGGPMVCESRGR 896
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 264 LLTAAHCWFDGTNQXXXXXXXXXXXXXFSGGTRV--ETSSIVMHPNWSPATIRNDVAVIY 437
++TAAHC ++ GT + I+ HP ++ + ND+A+I
Sbjct: 103 VVTAAHCIAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKRIITHPTYNSPQLSNDIALIE 162
Query: 438 LPSPVTLSDTINTIALPS 491
L SPV LSD + +++ S
Sbjct: 163 LSSPVPLSDRGHQVSVGS 180
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +2
Query: 131 NTRIVGGSPATLGQFPYQGGLLITIVVNGQPRTGVCGVRLLH*QTIDSCSLLVRWHQP 304
+TRIVGG+ A G +P+Q L T +G P CG L+H Q + + + V +P
Sbjct: 661 STRIVGGTAAKQGDWPWQAQLRST---SGFP---FCGGSLIHPQWVLTATHCVSSRRP 712
Score = 29.5 bits (63), Expect = 3.5
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Frame = +2
Query: 515 VGSSAVASGFGLTSSSGS---ITTNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCTSGRX 685
VGS +G+G G I ++ ++ D V F + S +C +G
Sbjct: 178 VGSKCFITGWGKIRHPGGSHHILQQAMMPPLSQDACKKKVQQAGFGIQITDSMVC-AGVP 236
Query: 686 G--VGTCRGDSGGPLV-VTRNNRPILIG 760
G V C GDSGGP V + + R +L G
Sbjct: 237 GSVVSGCHGDSGGPYVCIQPDGRYVLQG 264
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 47.2 bits (107), Expect = 2e-05
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCTSG-RXGVG 694
G+ +G+G SS GS + L+ + + C ++P + + +C GV
Sbjct: 753 GTMCYITGWGTLSSGGS--QPEALNQAVVPLRTRSECERSYPGKISADMICAGNPEGGVD 810
Query: 695 TCRGDSGGPLVVTRNNRPILIGI 763
TC+GDSGGPLV N+ L G+
Sbjct: 811 TCQGDSGGPLVCQHGNQWFLTGV 833
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 45.6 bits (103), Expect = 5e-05
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTF--AFPFVLQSSNLCTSGRXGV 691
G+ +G+G S G+ + ++L +++ CT ++ SS + + G+
Sbjct: 339 GTECWITGWGRLHSGGA--SPEILQQAKTKLLSYAECTKNGSYEAAAVSSTMLCAQVPGI 396
Query: 692 GTCRGDSGGPLVVTRNNRPILIGI 763
TC+GDSGGPLV NN+ L+G+
Sbjct: 397 DTCQGDSGGPLVCENNNKWTLVGV 420
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 45.6 bits (103), Expect = 5e-05
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +3
Query: 354 GTRVETSSIVMHPNWSPATIRNDVAVIYLPSPVTLSDTINTIALPS 491
G + S I HP +S AT +D+A++ L +PV L+ ++NTI LPS
Sbjct: 29 GKELTISKITYHPGFSFATADHDIAILRLSAPVLLTSSVNTICLPS 74
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +2
Query: 506 RNFVGSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPF---VLQSSNLCTS 676
R +G + SG+G +SS L + +I N C VL S +C
Sbjct: 78 RASLGGNCFISGWGRINSSDMQLLANKLQQSRVSIIENNKCKVKNDCHYKVLDKSMVCAG 137
Query: 677 GRXGVGTCRGDSGGPLVVTRNNRPILIGI 763
G G C GDSGGPL N +L G+
Sbjct: 138 GA-GSSICHGDSGGPLQCEENGHWVLRGV 165
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 45.6 bits (103), Expect = 5e-05
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCTS-GRXGVG 694
G +G+G SS GS T L V++ + + C ++P + S +C + G+
Sbjct: 23 GKHCWVTGWGRLSSGGS--TPDYLQQVSVPIRSRARCDSSYPNKIHDSMICAGIDKGGID 80
Query: 695 TCRGDSGGPLVVTRNNR 745
C+GDSGGP+V R
Sbjct: 81 ACQGDSGGPMVCENGGR 97
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 44.8 bits (101), Expect = 9e-05
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +3
Query: 267 LTAAHCWFDGTNQXXXXXXXXXXXXXFSGGTRV-ETSSIVMHPNWSPATIRNDVAVIYLP 443
LTAAHC +N +V S ++ H +S +RNDV ++ L
Sbjct: 122 LTAAHCVQRSSNPADYTLAAGAHRRVNDAHAQVLRVSQVISHKEFSMGHLRNDVTLLRLS 181
Query: 444 SPVTLSDTINTIALPS 491
+PV LSD I TI LP+
Sbjct: 182 APVQLSDKIGTICLPA 197
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 536 SGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCTS-GRXGVGTCRGDS 712
+G+G T +SG N+++ ++ +++ C A+P + S LC G+ C+GDS
Sbjct: 79 TGWG-TLASGGNQPNKLMQ-ASVPLVSQSKCNTAYPNKIHDSMLCAGLDAGGIDACQGDS 136
Query: 713 GGPLVVTRNNR 745
GGPLV N R
Sbjct: 137 GGPLVCEYNGR 147
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 539 GFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCTSGRXGVGTCRGDSGG 718
G+G SSS T L + ++N C + +++ +G G C GDSGG
Sbjct: 416 GWGRISSSDQHTLADKLQQSKVPLVNYTTCRSTNGATVDENSMICAGGAGSSACNGDSGG 475
Query: 719 PLVVTRNNRPILIGI 763
PL N R +L G+
Sbjct: 476 PLQCLENERWVLRGV 490
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/87 (33%), Positives = 40/87 (45%)
Frame = +3
Query: 267 LTAAHCWFDGTNQXXXXXXXXXXXXXFSGGTRVETSSIVMHPNWSPATIRNDVAVIYLPS 446
LTAAHC ++ + G S I H +S +RNDVA++ L +
Sbjct: 277 LTAAHC-LTLSDDASDYTLVAGAHQRENDGQVFGISKIRKHKGFSMVHVRNDVALLKLST 335
Query: 447 PVTLSDTINTIALPSGQELQETLLDPR 527
V LSD + TI LPS ++ LL R
Sbjct: 336 YVQLSDKVGTICLPSQGARRQPLLYQR 362
>SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1659
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = +3
Query: 354 GTRVETSSIVMHPNWSPATIRNDVAVIYLPSPVTLSDTINTIALP 488
G +++ + I+ H +S + +R+D+A+I L SP LS T+NT+ LP
Sbjct: 1553 GVQLKIAKIIPHKGYSRSHLRHDIALIKLASPAKLSATVNTVCLP 1597
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 536 SGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCTS-GRXGVGTCRGDS 712
+G+G +S G T +L ++ +++ C A+P + SS LC + G+ C+ DS
Sbjct: 242 TGWGHLASGGD--TPDLLQQASVPIVSRSRCDKAYPGKIDSSMLCAGLDKGGIDACQRDS 299
Query: 713 GGPLVVTRNNR 745
GGPLV R
Sbjct: 300 GGPLVSKTGER 310
Score = 37.9 bits (84), Expect = 0.010
Identities = 12/43 (27%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +3
Query: 363 VETSSIVMHPNWS-PATIRNDVAVIYLPSPVTLSDTINTIALP 488
++ S +++HP++ P T+ +D+A++ L T+++ ++T+ LP
Sbjct: 185 IKVSKVILHPSYGKPVTLAHDIALLKLEKSATVNNNVHTVCLP 227
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 42.7 bits (96), Expect = 4e-04
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVC--TFAFPFVLQSSNLCTSGRXGV 691
G+ +G+G T+ GS + N L V L ++N+ C T+ + + +G GV
Sbjct: 417 GTLCYVTGWGSTNYRGSPSPNY-LQEVGLPLVNHSQCHATYLTASRKITPRMRCAGTEGV 475
Query: 692 G--TCRGDSGGPLVVTRNNRPILIGI 763
C GDSGGPLV R R L+G+
Sbjct: 476 AKAVCSGDSGGPLVCERGGRWFLMGL 501
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 42.7 bits (96), Expect = 4e-04
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVC--TFAFPFVLQSSNLCTSGRXGV 691
G+ +G+G T+ GS + N L V L ++N+ C T+ + + +G GV
Sbjct: 666 GTLCYVTGWGSTNYRGSPSPNY-LQEVGLPLVNHSQCHATYLTASRKITPRMRCAGTEGV 724
Query: 692 G--TCRGDSGGPLVVTRNNRPILIGI 763
C GDSGGPLV R R L+G+
Sbjct: 725 AKAVCSGDSGGPLVCERGGRWFLMGL 750
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +2
Query: 542 FGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCTSGRXGVGTCRGDSGGP 721
+G T+ GS T VL V + +++ C+ A+ + +S G+ +C+GDSGGP
Sbjct: 2 WGRTAEGGSSPT--VLMQVEVPIVSASTCSRAYSRLHESMVCAGRASGGIDSCQGDSGGP 59
Query: 722 LVVTRNNRPILIGI 763
+V N + L G+
Sbjct: 60 MVCEYNGKFNLEGV 73
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 42.3 bits (95), Expect = 5e-04
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +2
Query: 503 TRNFVGSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVC----TFAFPFVLQSSNLC 670
+R VG+ +G+G G +++L L V ++ C ++ P V + S +C
Sbjct: 189 SRAQVGAQCFITGWGRLVGGGQ--PSEILQQAMLPVASHSACDRKNSYLVP-VEEKSMIC 245
Query: 671 TSGRXGVGTCRGDSGGPLVVTRNNRPILIG 760
G G+G C+GDSGGP V R +L G
Sbjct: 246 AGGM-GMGGCQGDSGGPFVCNEGGRWVLRG 274
Score = 37.5 bits (83), Expect = 0.013
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +3
Query: 372 SSIVMHPNWSPATIRNDVAVIYLPSPVTLSDTINTIALP 488
+ + H ++S + ++NDVA++ L +P+ SD +NT+ LP
Sbjct: 147 TKLFKHKDFSMSHLKNDVALLKLDNPIQPSDKVNTVCLP 185
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 536 SGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCTS-GRXGVGTCRGDS 712
+G+G T +SG N+++ ++ +++ C A+P + S LC G+ C+GDS
Sbjct: 423 TGWG-TLASGGNQPNKLMQ-ASVPLVSQSKCNTAYPNKIHDSMLCAGLDAGGIDACQGDS 480
Query: 713 GGPLVVTRNNR 745
GGPLV R
Sbjct: 481 GGPLVCEYKGR 491
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTF--AFPFVLQSSNLCTSGRXG- 688
G+ SG+G G+ +T++VL + +++ C+ ++ + + LC R G
Sbjct: 344 GTKCTISGWGALQE-GAGSTSKVLMQAKVPLVSRDQCSHQQSYGDRITENMLCAGMRQGG 402
Query: 689 VGTCRGDSGGPLVVTRNNRP 748
V +C+GDSGGP V T P
Sbjct: 403 VDSCQGDSGGPFVCTNPENP 422
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCTS-GRXGV- 691
G +G+G T +G+ + ++L L + ++ C + V +++LC R G
Sbjct: 202 GKRCYITGWGSTIGTGN--SPRILQQAMLPIASHNDCKNKYYGVSSTAHLCAGEARSGAS 259
Query: 692 GTCRGDSGGPLVVTRNNRPILIG 760
G C GDSGGPLV N R L G
Sbjct: 260 GGCNGDSGGPLVCEDNGRWYLHG 282
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 515 VGSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQS-SNLCT--SGRX 685
VG+ +G+G S G + L + +++ C A+ +++ S++C +
Sbjct: 442 VGAICYIAGWGRLQSLGDVALT--LQQAKVPIVSKEDCKRAYGAIIRPYSHICVGFNTEN 499
Query: 686 GVGTCRGDSGGPLVVTRNNRPILIG 760
+C+GDSGGPLV R +L G
Sbjct: 500 AASSCQGDSGGPLVCEEEGRWVLHG 524
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +3
Query: 363 VETSSIVMHPNWSPATIRNDVAVIYLPSPVTLSDTINTIALPSGQ 497
++ + H +S A +D+A++ L ++D ++T LPSG+
Sbjct: 395 IKVRRVYRHRGFSMANYVDDIALLELERSAVINDKVSTACLPSGE 439
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 363 VETSSIVMHPNWSPATIRNDVAVIYLPSPV 452
+ S ++ HP + I+ND+A++ L PV
Sbjct: 152 IPVSHVIEHPEYDDRKIKNDIALLELSRPV 181
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +3
Query: 264 LLTAAHCWFDGTNQXXXXXXXXXXXXXFSGGTR--VETSSIVMHPNWSPATIRNDVAVIY 437
++TAAHC +N + T + ++ HP ++ + ND+A+I
Sbjct: 512 VVTAAHCVARSSNPAQYQIIVGEHNRNVNEVTEETLNVKKVIAHPQYNNPRLSNDIALIE 571
Query: 438 LPSPVTLSDTINTIALP 488
L SP LS +N + LP
Sbjct: 572 LASPAKLSSRVNPVCLP 588
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 39.9 bits (89), Expect = 0.003
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCTS-GRXGVG 694
G +G+G SS GS +L + V+ C A+ + S LC GV
Sbjct: 447 GDRCYITGWGKLSSHGSAP--DILQQATVPVVGRARCMKAYRGQIHESMLCAGLDAGGVD 504
Query: 695 TCRGDSGGPL 724
C+GDSGGP+
Sbjct: 505 ACQGDSGGPM 514
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 384 MHPNWSPATIRNDVAVIYLPSPVTLSDTINTIALPS 491
+HP++SP + +D+A+I L PVT +D + I LPS
Sbjct: 198 IHPHYSPDSYDSDIALIRLAQPVTFTDYVKPICLPS 233
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +3
Query: 264 LLTAAHCWFDGTNQXXXXXXXXXXXXXFSGGTRVETS----SIVMHPNWSPATIRNDVAV 431
++TAAHC N +G T V+ + + H +S ++ND+A+
Sbjct: 67 VVTAAHCV--DRNPTPSGYTVVVGAHHRTGNTPVQNTFRLKQLFKHEQFSMRHLKNDIAL 124
Query: 432 IYLPSPVTLSDTINTIALPS 491
+ L PV SD +NT+ LPS
Sbjct: 125 LQLHEPVKASDKVNTVCLPS 144
Score = 37.1 bits (82), Expect = 0.018
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +2
Query: 503 TRNFVGSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVC--TFAFPFVLQSSNLCTS 676
+R G+ +G+G T GS +L L V + C T + S ++ +
Sbjct: 147 SRAQAGARCYITGWGRTVGGGSAAG--ILQQAMLPVAGDSDCQRTNGRLVPVDSRSMICA 204
Query: 677 GRXGVGTCRGDSGGPLVVTRNNRPILIG 760
G G G C+GDSGGP V + +L G
Sbjct: 205 GGQGKGGCQGDSGGPFVCEEGGKWVLRG 232
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +2
Query: 515 VGSSAVASGFGL-TSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQS-SNLCTSGRX- 685
VGS +G+G SSG + +L + + ++ C + + S ++LC
Sbjct: 64 VGSKCWLTGWGRQVDSSGPLP--DILQQARIPIASHEDCKRKYGSGIYSYTHLCAGEAKP 121
Query: 686 -GVGTCRGDSGGPLVVTRNNRPILIGI 763
G C+GDSGGPLV RN + L G+
Sbjct: 122 NAAGACQGDSGGPLVCERNGQWTLYGV 148
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 363 VETSSIVMHPNWSPATIRNDVAVIYLPSPVTLSDTINTIALPS 491
++ I H +S R+D+A++ L P L+D +N LPS
Sbjct: 15 IKVKRIFKHSGFSMWRYRDDIALLQLERPAQLNDRVNVACLPS 57
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +3
Query: 264 LLTAAHCWFDGTNQXXXXXXXXXXXXXFSGG--TRVETSSIVMHPNWSPATIRN-DVAVI 434
++TAAHC+ + + G R + I++HP ++P + DVA+I
Sbjct: 145 IVTAAHCFAYSKDAKDYTIAVGEHDLNATDGYEQRPDVERIILHPKYAPHNNHDYDVALI 204
Query: 435 YLPSPVTLSDTINTIALPSGQE 500
L SP+ +D + + LPS +E
Sbjct: 205 KLASPLQYNDRVRPVCLPSLKE 226
Score = 31.5 bits (68), Expect = 0.88
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 584 VLSHVNLDVINNFVCTFAFP---FVLQSSNLCTS-GRXGVGTCRGDSGGPLVVTRNNRPI 751
VL + +++ C A+ + + S C G G+ C+GDSGGPLV +
Sbjct: 251 VLHQAAVPLVSRDTCQKAYNDLHYKVSSRMRCAGYGAGGIDACQGDSGGPLVCKEGDVWY 310
Query: 752 LIG 760
L+G
Sbjct: 311 LMG 313
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 107 KAEEAGLSNTRIVGGSPATLGQFPYQGGLLITIVVNGQPRT-GVCG 241
K G NTRIVGG+ A G +P+Q + + V N +T +CG
Sbjct: 93 KCGTKGKGNTRIVGGTRAKKGAWPWQ--ISMNYVHNKVTKTPHICG 136
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 38.7 bits (86), Expect = 0.006
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +3
Query: 378 IVMHPNWSPATIRNDVAVIYLPSPVTLSDTINTIALPSGQ 497
I++H ++ + NDVA+I L PVTL +NT LP+G+
Sbjct: 582 IILHEGYT-TNLLNDVALIQLARPVTLGSKVNTACLPTGE 620
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 602 LDVINNFVCTFAFPFVLQSSNLCT--SGRXGVGTCRGDSGGPLVVTRNNRPILIG 760
L + ++ C + V +++LC + G C GDSGGPLV N L G
Sbjct: 913 LPIASHENCRRKYGDVSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGSWFLHG 967
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +2
Query: 515 VGSSAVASGFGLTSSSGSITTNQ-VLSHVNLDVINNFVCTFAFPFVLQSSNLCTSGRXGV 691
V ++ + +G S IT Q L L + + +C + + R G
Sbjct: 611 VNTACLPTGEIAVGSKCYITGTQGTLQQAMLPIAEHSLCRKQYRVDRTAHPCAGEARVGA 670
Query: 692 -GTCRGDSGGPLVVTRNNRPILIG 760
G C GDSGGPLV ++ +L G
Sbjct: 671 AGGCNGDSGGPLVCEQSGVWVLHG 694
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 38.3 bits (85), Expect = 0.008
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQ-SSNLCTSGRXGV- 691
G+ SG+G S + VL ++ +++ C + + ++ + +G G
Sbjct: 1909 GTPCYVSGWGRIGESSP--GSNVLQEASIPLVDQRACEEQYRNLKPITARMRCAGIYGTP 1966
Query: 692 -GTCRGDSGGPLVVTRNNRPILIGI 763
GTC+GDSGGPLV R +L+G+
Sbjct: 1967 KGTCKGDSGGPLVCESKGRWVLMGV 1991
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 363 VETSSIVMHPNWSPATIRNDVAVIYLPSPVTLSDTINTIALPSGQELQET 512
+ IV+HP+++ + D+A++ L P+T + ++ + LP L T
Sbjct: 1863 IPIEGIVVHPSYND--LDYDIALLKLRQPITFNAYVSQVCLPQAALLAGT 1910
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 36.7 bits (81), Expect = 0.023
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 378 IVMHPNWSPATIRNDVAVIYLPSPVTLSDTINTIALPSGQE 500
+++HPN+ T +DVA++ L P TL+ ++ I LP E
Sbjct: 1408 VIVHPNYRRQTTDSDVALLRLSHPATLNKAVSLICLPKEGE 1448
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = +2
Query: 515 VGSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPF--VLQSSNLCTSGRXG 688
VG + +G+G T + + VL + +++ C A V+ S +C G
Sbjct: 1452 VGKNCYITGWGRTGYNRPGAS--VLQEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAG 1509
Query: 689 --VGTCRGDSGGPLVVTRNNR 745
+ C GDSGGP V +N+
Sbjct: 1510 STISGCFGDSGGPFVCQGSNK 1530
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 36.7 bits (81), Expect = 0.023
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +2
Query: 515 VGSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVL--QSSNLCTSGRXG 688
VG + +G+G + L L V +N C +L +++ +G G
Sbjct: 65 VGKNCFITGWGRVFEGSDEA--EFLQEAELVVASNAKCDKKNGELLPVDDASMVCAGGPG 122
Query: 689 VGTCRGDSGGPLVVTRNNRPILIGI 763
G C+GDSGGPLV R +L GI
Sbjct: 123 RGGCQGDSGGPLVCNEAGRWVLRGI 147
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 36.3 bits (80), Expect = 0.031
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 515 VGSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFP-FVLQSSNLCTSGRXG- 688
VG++ +G+G + ++T L H + V++ C + + +C G
Sbjct: 564 VGTNCTVTGYGRVGENEDLSTQ--LRHATIPVLSVSECRANYSGHTINDKVICAGYEGGK 621
Query: 689 VGTCRGDSGGPLV 727
+ +C+GDSGGP V
Sbjct: 622 IDSCKGDSGGPFV 634
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/43 (27%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 366 ETSSIVMHPNWSPATIRNDVAVIYLPSPV-TLSDTINTIALPS 491
+ + I +HP++ + ND+A+I L +P+ T + + + LP+
Sbjct: 514 DVAQICIHPDYHEIKLTNDLALIRLRTPITTFTKHVRPVCLPT 556
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 36.3 bits (80), Expect = 0.031
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +3
Query: 264 LLTAAHCWFDGTNQXXXXXXXXXXXXXFSGGTRV-ETSSIVMHPNWS-PATIRNDVAVIY 437
+LTA HC + G ++ I+ HP++S NDVA++
Sbjct: 98 VLTAGHCILTEDPEKYRVVLGDVDRDTTEGSEQIFHVRRIIKHPHYSRDVPYDNDVALLQ 157
Query: 438 LPSPVTLSDTINTIALPSGQE 500
L P ++ +NT+ LP+ +E
Sbjct: 158 LSRPAFVTSFVNTVCLPAQEE 178
Score = 32.3 bits (70), Expect = 0.50
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 110 AEEAGLSNT---RIVGGSPATLGQFPYQGGLLITIVVNGQPRTGVCGVRLLH*QTIDSCS 280
AE G+S++ R+V G ATLG++P+Q L +T P VCG L+ Q + +
Sbjct: 49 AEHCGVSDSASSRVVSGDDATLGEWPWQAWLHVT------PHGFVCGGSLIAPQWVLTAG 102
Query: 281 LLVRWHQPRHER 316
+ P R
Sbjct: 103 HCILTEDPEKYR 114
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 698 CRGDSGGPLVVTRNNRPILIGIHHLALVSVAK 793
C GDSGGP V +R +L G+ + + + + K
Sbjct: 240 CYGDSGGPFVCKTADRWVLQGVLYSSFLEIRK 271
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 36.3 bits (80), Expect = 0.031
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +3
Query: 264 LLTAAHCWFDGTNQXXXXXXXXXXXXXFSGGTRVE---TSSIVMHPNWS-PATIRNDVAV 431
++TA+HC D SG + V+ I+ H +S P + ND+AV
Sbjct: 60 VVTASHC-IDKKTPSSLRIRLGAHRRAESGESTVQDFRVKRIIKHERYSNPVNLANDIAV 118
Query: 432 IYLPSPVTLSDTINTIALPS-GQELQE 509
I L P L+ +N LP+ E+QE
Sbjct: 119 IELEEPARLNRAVNLACLPTQSNEIQE 145
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 35.9 bits (79), Expect = 0.041
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +2
Query: 656 SSNLCTSGRXGVGTCRGDSGGPLVVTRNNRPILIGI 763
+S +C G G G C+GDSGGPLV R +L GI
Sbjct: 573 ASMVCAGG-PGRGGCQGDSGGPLVCNEAGRWVLRGI 607
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 35.9 bits (79), Expect = 0.041
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 659 SNLCTSGRXGVGTCRGDSGGPLVVTRNNRPILIG 760
S +C G+ G C+GDSGGP V + +L G
Sbjct: 135 SMICAGGQRAAGGCQGDSGGPFVCNEGGKWVLRG 168
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 35.9 bits (79), Expect = 0.041
Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +2
Query: 536 SGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFP-FVLQSSNLCTSGRXGVGTCRGDS 712
+G+G S S L V+++ C F + + +G G C GDS
Sbjct: 439 TGWGRVSGSMMFFMATKLQQARTPVVDHETCAIKLDKFAADKTTMICAGGSGSSACSGDS 498
Query: 713 GGPLVVTRNNRPILIG 760
GGPLV +L G
Sbjct: 499 GGPLVCHEGGTWVLRG 514
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 35.5 bits (78), Expect = 0.054
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Frame = +2
Query: 500 ITRNFV-GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTF--AFPFVLQSSNLC 670
+T N G+ +G+G T+ + VL+ + +D+++ VC ++ + C
Sbjct: 108 VTANLTTGTKCFVTGWGKTAEGSPYSP--VLNELEVDIVSKEVCNANDSYNGTINDRYFC 165
Query: 671 TS-GRXGVGTCRGDSGGPLVVTR-NNRPILIGI 763
+ G +C GDSGGPLV + + + +L G+
Sbjct: 166 AGFPQGGRDSCGGDSGGPLVCSNADGQYVLRGV 198
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 35.5 bits (78), Expect = 0.054
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 536 SGFGLTSSSGSITTNQVLSHVNLDVINNFVC-TFAFPFVLQSSNLCTS-GRXGVGTCRGD 709
+G+G SS G+ L ++ +++ C T + + S LC + GV +C+GD
Sbjct: 159 TGWGSLSSGGAAPDR--LMQASVPLVSKSRCDTGNYTGKIHESMLCAGLEQGGVDSCQGD 216
Query: 710 SGGPLVVTRNN 742
SGGPLV N
Sbjct: 217 SGGPLVCEDTN 227
>SB_59789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 49
Score = 35.1 bits (77), Expect = 0.071
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 351 GGTRVETSSIVMHPNWSPATIRNDVAVIYLPSPVTLSD 464
G T + ++ H ++S +RND+A+I L PVTLS+
Sbjct: 11 GQTPIAIHEVIKHESFSMRHLRNDIALIRLVKPVTLSE 48
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTN----QVLSHVNLDVINNFVCTFAFPFVLQSSNLCTSGRX 685
GS + +G+G T + + VL V L +++ VC + C
Sbjct: 848 GSVGIVAGWGSTQKGDASVRSGPPYPVLKQVQLPFVSHRVCQVNHTNAITKRMRCAGDVM 907
Query: 686 GV-GTCRGDSGGPLVVTRNN 742
G C+GDSG P+VV R +
Sbjct: 908 GERDACKGDSGSPIVVKRTD 927
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +3
Query: 264 LLTAAHC-WFDGT---NQXXXXXXXXXXXXXFSGGTRVETSSIVMHPNWSPATIRNDVAV 431
++TAAHC ++DG + V S++V+HP + + DVA+
Sbjct: 759 VVTAAHCFYYDGKIVPSDILVRLGEHDRTLEEGSEQNVRASNLVLHPLANKNGLDFDVAL 818
Query: 432 IYLPSPVTLSDTINTIALP 488
I L V L+ + T+ LP
Sbjct: 819 IQLKGGVKLTAYVRTVCLP 837
>SB_13844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 602 LDVINNFVCTFAFPFVLQSSNLCT-SGRXGV-GTCRGDSGGPLVVTRNNRPILIG 760
L +++N C + V ++LC SG+ G C GDSGG LV R IL G
Sbjct: 2 LPLVSNAECQRKYSKVNAKAHLCACSGQAASSGGCNGDSGGALVCEEGGRSILRG 56
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 644 FVLQSSNLCTSGRXGVGTCRGDSGGPLVVTRNNRPILIGI 763
F L + G G C GDSGGPLV + +L G+
Sbjct: 102 FYLDEETMMCVGGAGSSACNGDSGGPLVCEEGGKWVLRGV 141
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +2
Query: 536 SGFGLTSSSGSITTNQVLSHVNLDVINNFVCT--FAFPFVLQSSNLCTSGRXGV-GTCRG 706
SG+G T +GS VL+ V + ++++ C ++ + + LC G+ +C
Sbjct: 165 SGWGHTRWNGS--QPNVLNFVMVPLVSHATCNKPLSYNGTIHETALCAGYERGLKDSCEF 222
Query: 707 DSGGPLVVTRNNRPILIGI 763
DSGGPL + R +G+
Sbjct: 223 DSGGPLACQKGGRYYAVGL 241
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 137 RIVGGSPATLGQFPYQGGLLITIVVNGQPRTGVCGVRLLH 256
R+VGG A GQFP+Q LL R CG L+H
Sbjct: 28 RVVGGDEAKAGQFPWQIALLF-------KRQQYCGGALVH 60
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 33.9 bits (74), Expect = 0.16
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 686 GVGTCRGDSGGPLVVTRNNRPILIGI 763
G+ +C+GDSGGP+V N R L G+
Sbjct: 273 GIDSCQGDSGGPMVCENNGRFYLDGV 298
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +3
Query: 264 LLTAAHCWFDGTNQXXXXXXXXXXXXXFSGGTR-VETSSIVMHPNW-SPATIRNDVAVIY 437
+LTAAHC G + ++ + ++ H + +P NDVA++
Sbjct: 68 VLTAAHCILSDDASKYKVVLGDVDRKKIEGSEQMIDVAMVIKHYAYGNPVPNANDVALLK 127
Query: 438 LPSPVTLSDTINTIALP 488
L T +D +NT+ LP
Sbjct: 128 LRDYPTKTDFVNTVCLP 144
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCT--SGRXGV 691
G +G+G + + + +L L + ++ C + V +++LC +
Sbjct: 556 GKRCYITGWGAINGDTQQSPD-ILQQAMLPIASHENCRRKYGDVSSTAHLCAGEARSDAA 614
Query: 692 GTCRGDSGGPLVVTRNNRPILIG 760
G C GDSGGPLV N L G
Sbjct: 615 GGCNGDSGGPLVCEDNGSWFLHG 637
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Frame = +3
Query: 264 LLTAAHCWFDGTNQXXXXXXXXXXXXXFSGGTR--VETSSIVMHPNWSPATIRNDVAVIY 437
++TAAHC N S + + S I+ HP ++ I ND+A++
Sbjct: 142 VVTAAHCIHRNKNPGGYTVVVGAHKKRGSTSVQQSLRLSQIIEHPKYNDRRIVNDIALLE 201
Query: 438 LPSPVTLSDT--INTIAL 485
L +PV + T+ L
Sbjct: 202 LATPVQFDSAGKVGTVCL 219
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 372 SSIVMHPNWSPATIRNDVAVIYLPSPVTLSDT--INTIAL 485
S I+ HP ++ I ND+A++ L +PV + T+ L
Sbjct: 509 SQIIEHPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCL 548
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 692 GTCRGDSGGPLVVTRNNRPILIG 760
G C GDSGGPLV N L G
Sbjct: 281 GGCNGDSGGPLVCEDNGSWFLHG 303
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +3
Query: 363 VETSSIVMHPNWSPATIRNDVAVIYLPSPVTLSDTINTIALPSGQELQETLLDPR 527
+ ++ I HP +S T +D+A+I L +++ + + LP+G Q L+ PR
Sbjct: 1242 IPSAGIYSHPRFSWRTYDSDIALIRLRWKANITEYVRPVCLPNG--YQRRLVKPR 1294
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 31.9 bits (69), Expect = 0.66
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +2
Query: 536 SGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPF--VLQSSNLCTSGRXG-VGTCRG 706
+G+G S G + L V + ++ +C A + V+ LC R G G C+
Sbjct: 169 AGWGRRSFGGE--QSLALREVQVHMVPRELCNSANSYGGVIHERALCAGPREGGCGPCQF 226
Query: 707 DSGGPLVVTRNNRPILIGI 763
DSGGPL + + GI
Sbjct: 227 DSGGPLACSEGGLWYMYGI 245
>SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06)
Length = 151
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPF--VLQSSNLCTSGRXG- 688
G + + +G+G +G T + L + ++ +VC + + S LC + G
Sbjct: 80 GKTCIITGWGHIRWNG--TQPEALREAKVRLVPTWVCNLVNSYNGTIHSRALCAGFKEGG 137
Query: 689 VGTCRGDSGGPL 724
V C+ DSGGPL
Sbjct: 138 VDACQYDSGGPL 149
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 31.5 bits (68), Expect = 0.88
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCTSGRXGVGT 697
GSS V G+G T++ T L N+ +++ C++A + LC T
Sbjct: 795 GSSGVVIGWGKTTNKTVYTD---LRQANVTLVHRHRCSWALRNYDGNRLLCAGFLTSDVT 851
Query: 698 CRGDSGGPLV 727
C DSG PL+
Sbjct: 852 CISDSGSPLM 861
>SB_48669| Best HMM Match : DUF1298 (HMM E-Value=0.0015)
Length = 529
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 479 RSSKWTGITRNFVGSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCT 631
R+ G+ R SS F L SSG +T++Q S ++DV+++ +C+
Sbjct: 465 RTESQNGVQRRKTRSSGDLPDFELLPSSGEVTSSQESSESSIDVLSD-ICS 514
>SB_16479| Best HMM Match : Cyclin_N (HMM E-Value=5.9e-23)
Length = 392
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 479 RSSKWTGITRNFVGSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCT 631
R+ G+ R SS F L SSG +T++Q S ++DV+++ +C+
Sbjct: 69 RTESQNGVQRRKTRSSGDLPDFELLPSSGEVTSSQESSESSIDVLSD-ICS 118
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +2
Query: 536 SGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPF--VLQSSNLCTS-GRXGVGTCRG 706
+G+G T G T QV+ + ++ +C + + LC + GV C+
Sbjct: 177 TGWGKTEFEG--TKPQVIREATVKLVPPEICNQVESYNGSIHVRALCAGFDQGGVDACQF 234
Query: 707 DSGGPLVVTRNNRPILIGI 763
DSGGPL + +R L G+
Sbjct: 235 DSGGPLSCSIGSRFYLTGV 253
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTF--AFPFVLQSSNLCTS-GRXG 688
G +G+G T + + L + + ++N VC ++ ++ +C + G
Sbjct: 111 GKMCYLTGWGETVLDSGVFS-PTLKQLKVPLVNKSVCNSNNSYSGIIHEQFMCAGYNQGG 169
Query: 689 VGTCRGDSGGPL 724
C GDSGGPL
Sbjct: 170 QDGCLGDSGGPL 181
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 578 NQVLSHVNLDVINNFVCTFAFPFVLQSS-NLCTS-GRXGVGTCRGDSGGPLV 727
++VL H V + +C + + ++ C G+ G TCRGDSGG V
Sbjct: 187 SRVLRHTAFTVQPDRICRGSTSYHFNATITFCAGEGKGGNDTCRGDSGGSFV 238
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +3
Query: 363 VETSSIVMHPNWSPATIRNDVAVIYLP 443
++ S+I+ H N++ T+ ND+A++ LP
Sbjct: 462 IKVSAIITHSNYNSRTMYNDIALLKLP 488
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 128 SNTRIVGGSPATLGQFPYQGGLLITIVVNGQPRTGVCGVRLLH 256
S +RIVGG+ A G +P+Q L T G P CG L+H
Sbjct: 387 STSRIVGGAAANPGDWPWQAQLRTT---TGFP---YCGGSLIH 423
>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
Length = 230
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQSSN--LCTS-GRXG 688
G +G+G+ G T +L + ++ C + + S LC R G
Sbjct: 110 GKYCYVTGWGVLQWKG--TKPAILREAQVQLVPQDKCNSPQSYNGEVSGRALCAGFERGG 167
Query: 689 VGTCRGDSGGPLVVTRNNRPILIGI 763
V C+ DSGGPL R L G+
Sbjct: 168 VDACQYDSGGPLACEERGRWYLTGV 192
>SB_58272| Best HMM Match : DUF326 (HMM E-Value=2.2)
Length = 88
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 380 CNASELVSCYHS**CGRHLPTQSRYFV*YNQYDRSSKWTGIT 505
CN H+ C +H T ++ YNQYD+ W +T
Sbjct: 37 CNKHATTCNKHATTCNKHATTCNKRATIYNQYDKQPYWPLLT 78
>SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 565
Score = 29.1 bits (62), Expect = 4.7
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -2
Query: 360 WCHR*RVSRNQERPLRSCLGWCHRTSSE 277
WCH + N P ++ WCH T ++
Sbjct: 416 WCHPTKTQANWCHPTKTQANWCHPTKTQ 443
Score = 29.1 bits (62), Expect = 4.7
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -2
Query: 360 WCHR*RVSRNQERPLRSCLGWCHRTSSE 277
WCH + N P ++ WCH T ++
Sbjct: 426 WCHPTKTQANWCHPTKTQANWCHPTKTQ 453
Score = 28.3 bits (60), Expect = 8.2
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = -2
Query: 360 WCHR*RVSRNQERPLRSCLGWCHRTSSE 277
WCH + N P++ WCH ++
Sbjct: 36 WCHPTKTQANLNHPIKIQSNWCHPNKTQ 63
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCTSGR-XGVG 694
G+ SG+G SS G+ + VL + +++ C+ A+P S LC R GV
Sbjct: 370 GTRCWISGWGRLSSGGA--SPNVLMQAQVPLVSGQTCSQAYPGRTHYSMLCAGLRHGGVD 427
Query: 695 TCR 703
C+
Sbjct: 428 ACQ 430
>SB_46293| Best HMM Match : Keratin_B2 (HMM E-Value=0.00077)
Length = 677
Score = 28.7 bits (61), Expect = 6.2
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = -2
Query: 360 WCHR*RVSRNQERPLRSCLGWCHRTSSE 277
WCH ++ N P ++ WC+ T+++
Sbjct: 201 WCHTSKIQSNWYHPNKTQTNWCYPTNTQ 228
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 131 NTRIVGGSPATLGQFPYQGGLLIT 202
NTRIVGG+ A G +P+Q L T
Sbjct: 8 NTRIVGGTAAKHGDWPWQAQLRTT 31
>SB_14775| Best HMM Match : rve (HMM E-Value=6.6e-15)
Length = 167
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -1
Query: 598 HVTEDLVCRYRSRAAGQ--TKARSDCRGSNKVSCNSC 494
HV EDLV R + T S+C+GSN + C SC
Sbjct: 55 HVAEDLVKLSRFGVPEEILTDQGSNCQGSNCLICQSC 91
>SB_3680| Best HMM Match : Keratin_B2 (HMM E-Value=0.0024)
Length = 180
Score = 28.7 bits (61), Expect = 6.2
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = -2
Query: 360 WCHR*RVSRNQERPLRSCLGWCHRTSSE 277
WCH ++ N P ++ WC+ T+++
Sbjct: 46 WCHTSKIQSNWYHPNKTQTNWCYPTNTQ 73
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 581 QVLSHVNLDVINNFVCTFAFPFVLQSS-NLCTS-GRXGVGTCRGDSGGPLV 727
+VL H ++ N VC + ++ C G+ G TC GDSGG V
Sbjct: 246 KVLRHSAFEIQPNDVCDRSTRHNFNATVTFCAGDGKGGNDTCHGDSGGSFV 296
>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 604
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = -3
Query: 770 NDVYQSR*DGCFL*QQEGHRSHHGKCRHHXVHLCISLKIARRRGKQMCKQSY 615
NDV R D C E + HG+ H I +K A +GK CK Y
Sbjct: 104 NDVATGRCDDCCEFMCEFCITAHGRFLRTKQHKIIGVKEATVKGKTNCKSHY 155
>SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2516
Score = 28.3 bits (60), Expect = 8.2
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Frame = +2
Query: 497 GITRNFVGSSAVASGFGLTSSSGSITTNQVL--SHVNLDVINNFVCTFAFPFVLQSSNLC 670
G T N+ G++A + L SS S T ++ +N + + +++ L+
Sbjct: 546 GSTFNYYGANATENYLVLNGSSDSDTVANIMLKDPINARFVRIYPSSWSNNICLRIEIYG 605
Query: 671 TSGRXGVGTCRGDSGGPLVVTRNNRPILIGIHHLALVSVA 790
+ + TC G G L + NN I AL S A
Sbjct: 606 CASQDARATCLGQGGDLLSIVTNNEKAYIETRVKALDSSA 645
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 28.3 bits (60), Expect = 8.2
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Frame = +2
Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFA---FPFVLQSSNLCTS--GR 682
G+ +G+G+T + ++L + V+++ C V + + LC G
Sbjct: 409 GTMCYVTGWGMTEYGNAGA--RLLQQARIPVVSSEECERVNNKHRKVDKVTMLCAGNGGN 466
Query: 683 XGVGTCRGDSGGPLV-VTRNNRPILIGIHHLALVSVAK*TCLPHMPELHR 829
+ C GDSGGP V + + R +L G + VS+AK + + E R
Sbjct: 467 SSISGCHGDSGGPFVCMGGDGRWVLRGAVRMT-VSLAKVNVVHQLEETGR 515
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,784,729
Number of Sequences: 59808
Number of extensions: 604501
Number of successful extensions: 1946
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 1691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1940
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2359470773
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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