Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0845
         (838 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    36   0.027
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    34   0.11 
AC024791-36|AAF60654.3|  481|Caenorhabditis elegans Innexin prot...    33   0.33 
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    31   0.77 
AF098996-1|AAM34815.1|  523|Caenorhabditis elegans Hypothetical ...    31   0.77 
U58726-7|AAP13770.1|  562|Caenorhabditis elegans Amp-activated k...    31   1.3  
U58726-6|AAM69095.1|  624|Caenorhabditis elegans Amp-activated k...    31   1.3  
U58726-5|AAM69096.1|  626|Caenorhabditis elegans Amp-activated k...    31   1.3  
AY347273-1|AAR06928.1|  624|Caenorhabditis elegans AMP-activated...    31   1.3  
Z69718-3|CAA93538.1|  365|Caenorhabditis elegans Hypothetical pr...    29   5.4  
Z83237-6|CAE17879.1|  549|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 36.3 bits (80), Expect = 0.027
 Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
 Frame = +2

Query: 530 VASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQ---SSNLCTSGRXG-VGT 697
           V +G+G T    S++    L  +++ +++   C+    ++ +    S LC     G + +
Sbjct: 178 VVTGWGSTIEGSSLSA-PTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGYSYGKIDS 236

Query: 698 CRGDSGGPLVVTRNNRPILIGI 763
           C+GDSGGPL+  R+    L G+
Sbjct: 237 CQGDSGGPLMCARDGHWELTGV 258


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
 Frame = +2

Query: 524 SAVASGFGLT---SSSGS--ITTNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCT----- 673
           + V  G+GLT    SSG   +  +Q L   ++ +I++  C   + F+   S   T     
Sbjct: 157 NGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQIC 216

Query: 674 SGRXGVGTCRGDSGGPLVVTRNN-RPILIGI 763
           +G    GT  GDSGGPL++ ++N   + IGI
Sbjct: 217 AGAYLHGTAPGDSGGPLLIHKSNGEYVQIGI 247


>AC024791-36|AAF60654.3|  481|Caenorhabditis elegans Innexin protein
           21 protein.
          Length = 481

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 6   YWWLTAVLLHCLCMKIRYTVTLLSMVYQKQRGFARLKRQD 125
           YWW   V    LC  I YT+ LL   Y++    + ++ +D
Sbjct: 291 YWWFLLVSFISLCSAIHYTIILLVPQYRRHEFKSMIRTED 330


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
 Frame = +2

Query: 518 GSSAVASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFV--LQSSNLCTSG-RXG 688
           G   V SG+G    S  +   + L    + +IN F C  +      +  S  C      G
Sbjct: 149 GRQCVVSGWG----SMGLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEGG 204

Query: 689 VGTCRGDSGGPLVVTRNNRP-ILIGI 763
           + +C+GDSGGP    R +   +L G+
Sbjct: 205 IDSCQGDSGGPFACRREDGAFVLAGV 230


>AF098996-1|AAM34815.1|  523|Caenorhabditis elegans Hypothetical
           protein T11F1.7 protein.
          Length = 523

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = +2

Query: 539 GFGLTSSSGSITTNQVLSHVNLDVINNFV 625
           G+G TSS  SIT N  L+  N+DVI+NF+
Sbjct: 115 GYGCTSSGLSITNNSQLT--NIDVISNFL 141


>U58726-7|AAP13770.1|  562|Caenorhabditis elegans Amp-activated
           kinase protein 2,isoform c protein.
          Length = 562

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2

Query: 582 WFVVIDPELLVRPKPEATAEDPTKFLVIPVHLEERSY 472
           W V+    ++VR KP+A A DP K  +    +++RSY
Sbjct: 429 WKVLNPYHVIVRRKPDAPAADPPKMSLQLYQVDQRSY 465


>U58726-6|AAM69095.1|  624|Caenorhabditis elegans Amp-activated
           kinase protein 2,isoform a protein.
          Length = 624

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2

Query: 582 WFVVIDPELLVRPKPEATAEDPTKFLVIPVHLEERSY 472
           W V+    ++VR KP+A A DP K  +    +++RSY
Sbjct: 491 WKVLNPYHVIVRRKPDAPAADPPKMSLQLYQVDQRSY 527


>U58726-5|AAM69096.1|  626|Caenorhabditis elegans Amp-activated
           kinase protein 2,isoform b protein.
          Length = 626

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2

Query: 582 WFVVIDPELLVRPKPEATAEDPTKFLVIPVHLEERSY 472
           W V+    ++VR KP+A A DP K  +    +++RSY
Sbjct: 493 WKVLNPYHVIVRRKPDAPAADPPKMSLQLYQVDQRSY 529


>AY347273-1|AAR06928.1|  624|Caenorhabditis elegans AMP-activated
           protein kinase alphasubunit 1 protein.
          Length = 624

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2

Query: 582 WFVVIDPELLVRPKPEATAEDPTKFLVIPVHLEERSY 472
           W V+    ++VR KP+A A DP K  +    +++RSY
Sbjct: 491 WKVLNPYHVIVRRKPDAPAADPPKMSLQLYQVDQRSY 527


>Z69718-3|CAA93538.1|  365|Caenorhabditis elegans Hypothetical
           protein W06D11.4 protein.
          Length = 365

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 754 DWYTSFGSGLGCQVNLPAAYAR 819
           D++   GSG+G  VN  AAYAR
Sbjct: 190 DYFMDLGSGIGHLVNFVAAYAR 211


>Z83237-6|CAE17879.1|  549|Caenorhabditis elegans Hypothetical
           protein R06B9.6 protein.
          Length = 549

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 400 LLLPFVMMWPSFTYPVPLLCLIQSIR 477
           ++L F + W S TY +P L LI  +R
Sbjct: 285 VILDFPIEWISLTYRIPFLLLISDLR 310


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,102,773
Number of Sequences: 27780
Number of extensions: 446684
Number of successful extensions: 1348
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)