Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0844
         (410 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    25   1.1  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   2.5  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       23   4.3  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    22   7.6  

>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 14/40 (35%), Positives = 16/40 (40%)
 Frame = -1

Query: 296 ATLATASSRSLRHTRCGRETTCRG*CDREHGMYVCVGRAR 177
           A   T   RS R  RCG +T     C  E    +C G  R
Sbjct: 476 AATCTGEDRSKRCLRCGDQTHKASGCTNEVKCMLCGGAHR 515


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = +2

Query: 62   WPKKSAEFLLQLLRNAESNADNKTLDVDRLVI---DHIQVNRAPCLR 193
            W +   E+L  L + A+ N +  +++  RLVI   D++ V++ P  R
Sbjct: 1641 WNRWHREYLSTLQKRAKWNKNAISIEPGRLVILQEDNVAVSKWPMAR 1687


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 148 ASYRPHSGKSRALPTQTYIPCSRS 219
           A+ RPH  K + L  Q   PC +S
Sbjct: 112 AAKRPHMKKKKVLFHQDNAPCHKS 135


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 203 MYVCVGRARDLPECGR*LACQR 138
           ++  VGR R +P+CG  L  +R
Sbjct: 124 LFYNVGRNRTVPKCGGALISER 145


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 406,097
Number of Sequences: 2352
Number of extensions: 7863
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)