Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0844
(410 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 159 3e-39
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 159 3e-39
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 159 3e-39
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 159 3e-39
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 159 3e-39
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 159 3e-39
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 156 2e-38
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 74 2e-13
AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein. 29 4.5
BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven thro... 29 7.9
AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein. 29 7.9
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 159 bits (387), Expect = 3e-39
Identities = 71/87 (81%), Positives = 80/87 (91%)
Frame = +2
Query: 2 FNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRA 181
+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+A
Sbjct: 63 YNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKA 122
Query: 182 PCLRRRTYRAHGRINPYMSSPCHIEYV 262
P +RRRTYRAHGRINPYMSSPCHIE +
Sbjct: 123 PKMRRRTYRAHGRINPYMSSPCHIEMI 149
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 159 bits (387), Expect = 3e-39
Identities = 71/87 (81%), Positives = 80/87 (91%)
Frame = +2
Query: 2 FNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRA 181
+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+A
Sbjct: 63 YNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKA 122
Query: 182 PCLRRRTYRAHGRINPYMSSPCHIEYV 262
P +RRRTYRAHGRINPYMSSPCHIE +
Sbjct: 123 PKMRRRTYRAHGRINPYMSSPCHIEMI 149
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 159 bits (387), Expect = 3e-39
Identities = 71/87 (81%), Positives = 80/87 (91%)
Frame = +2
Query: 2 FNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRA 181
+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+A
Sbjct: 63 YNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKA 122
Query: 182 PCLRRRTYRAHGRINPYMSSPCHIEYV 262
P +RRRTYRAHGRINPYMSSPCHIE +
Sbjct: 123 PKMRRRTYRAHGRINPYMSSPCHIEMI 149
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 159 bits (387), Expect = 3e-39
Identities = 71/87 (81%), Positives = 80/87 (91%)
Frame = +2
Query: 2 FNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRA 181
+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+A
Sbjct: 63 YNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKA 122
Query: 182 PCLRRRTYRAHGRINPYMSSPCHIEYV 262
P +RRRTYRAHGRINPYMSSPCHIE +
Sbjct: 123 PKMRRRTYRAHGRINPYMSSPCHIEMI 149
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 159 bits (387), Expect = 3e-39
Identities = 71/87 (81%), Positives = 80/87 (91%)
Frame = +2
Query: 2 FNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRA 181
+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+A
Sbjct: 63 YNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKA 122
Query: 182 PCLRRRTYRAHGRINPYMSSPCHIEYV 262
P +RRRTYRAHGRINPYMSSPCHIE +
Sbjct: 123 PKMRRRTYRAHGRINPYMSSPCHIEMI 149
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 159 bits (387), Expect = 3e-39
Identities = 71/87 (81%), Positives = 80/87 (91%)
Frame = +2
Query: 2 FNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRA 181
+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+A
Sbjct: 63 YNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKA 122
Query: 182 PCLRRRTYRAHGRINPYMSSPCHIEYV 262
P +RRRTYRAHGRINPYMSSPCHIE +
Sbjct: 123 PKMRRRTYRAHGRINPYMSSPCHIEMI 149
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 156 bits (379), Expect = 2e-38
Identities = 70/87 (80%), Positives = 79/87 (90%)
Frame = +2
Query: 2 FNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRA 181
+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+A
Sbjct: 63 YNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKA 122
Query: 182 PCLRRRTYRAHGRINPYMSSPCHIEYV 262
P +RRRTYRA GRINPYMSSPCHIE +
Sbjct: 123 PKMRRRTYRARGRINPYMSSPCHIEMI 149
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 74.1 bits (174), Expect = 2e-13
Identities = 34/66 (51%), Positives = 47/66 (71%)
Frame = +2
Query: 65 PKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 244
PK+ F L+ +SNA+ K LD+D L+I+ IQVN+AP + TYRAHG+INPY++S
Sbjct: 21 PKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYRAHGQINPYVTSA 79
Query: 245 CHIEYV 262
CHIE +
Sbjct: 80 CHIEMI 85
>AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein.
Length = 198
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 148 ASYRPHSGKSRALPTQTYIPCSRSHQPLHVVSLPH 252
+S R HS S+ L +Q++ P SRSH P PH
Sbjct: 92 SSRRAHSSWSQNLHSQSHSPHSRSHSPHSRSHSPH 126
>BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven
thrombospondin repeats (type 1 and type 1-like),
transmembra protein.
Length = 1151
Score = 28.7 bits (61), Expect = 7.9
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = -1
Query: 278 SSRSLRHTRCG-----RETTCRG*CDREHGMYVCVGRARDLPECGR*LACQRPKF 129
SS +L T CG R+ +C R HG +CVG++R+ C C P F
Sbjct: 671 SSWALCSTSCGIGFQVRQRSCSNPAPR-HGGRICVGKSREERFCNENTPCPVPIF 724
>AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein.
Length = 1202
Score = 28.7 bits (61), Expect = 7.9
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = -1
Query: 278 SSRSLRHTRCG-----RETTCRG*CDREHGMYVCVGRARDLPECGR*LACQRPKF 129
SS +L T CG R+ +C R HG +CVG++R+ C C P F
Sbjct: 722 SSWALCSTSCGIGFQVRQRSCSNPAPR-HGGRICVGKSREERFCNENTPCPVPIF 775
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,481,430
Number of Sequences: 237096
Number of extensions: 1012756
Number of successful extensions: 2674
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2674
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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