Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0843
         (368 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q64RN3 Cluster: Putative uncharacterized protein; n=3; ...    33   2.2  
UniRef50_Q8I5E4 Cluster: Putative uncharacterized protein; n=1; ...    32   3.8  
UniRef50_Q24FA2 Cluster: Putative uncharacterized protein; n=1; ...    32   3.8  
UniRef50_A0DTV8 Cluster: Chromosome undetermined scaffold_63, wh...    32   3.8  

>UniRef50_Q64RN3 Cluster: Putative uncharacterized protein; n=3;
           Bacteroides|Rep: Putative uncharacterized protein -
           Bacteroides fragilis
          Length = 636

 Score = 32.7 bits (71), Expect = 2.2
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +2

Query: 110 F*HATIVHFPKGPYIIVPSIYDRWRSIYVCLSELH-NLHTFIKIPLVTEESVTGFTSSIK 286
           F H T   FPKG Y     +   W + +  L + +  L    K+P +TE   T + + +K
Sbjct: 76  FEHETFASFPKGNYTASSPVISYWNTFFQGLRQCYIFLENVDKVPDLTESVKTDYIAQVK 135


>UniRef50_Q8I5E4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1172

 Score = 31.9 bits (69), Expect = 3.8
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
 Frame = +2

Query: 5   NTIYSHGTCEL------HEFIIIQ*MLRNVYIHT*FFQSYFF*HATIVHFPKGPYIIVPS 166
           N IY + TC+       +E  II  +  N YI+  F + Y+     I++     +++ P+
Sbjct: 369 NNIYDNNTCDKLKRTKQNERNIID-IFENEYINNSFLELYYNIGKDIIYLV---HVMKPT 424

Query: 167 IYDRWRSIYVCLSELHNLHTFIK 235
           +Y+    IY+  S L+NLH F+K
Sbjct: 425 LYE----IYMRRSVLYNLHLFLK 443


>UniRef50_Q24FA2 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1909

 Score = 31.9 bits (69), Expect = 3.8
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -2

Query: 130  YNCSMLKKIRLEKLCVNVYITQHSLYYNKFM 38
            + CS + KI+  ++ + ++I QH  YY KF+
Sbjct: 1839 FKCSQIHKIQKIQIHIKIHINQHKYYYFKFI 1869


>UniRef50_A0DTV8 Cluster: Chromosome undetermined scaffold_63, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_63,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1409

 Score = 31.9 bits (69), Expect = 3.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 139 RKMYNCSMLKKIRLEKLCVNVYITQHSLYY 50
           +K YNCS+LKK   EK+ VN+ +    L Y
Sbjct: 153 KKSYNCSLLKKDSYEKMLVNLILIMILLAY 182


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 302,033,159
Number of Sequences: 1657284
Number of extensions: 5246989
Number of successful extensions: 9385
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9383
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)