Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0843
         (368 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.11 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   7.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    20   7.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    20   7.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.11
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 157 YDIRTFRKMYNCSMLKKIRLEKLCVNVYITQHSLYYNKFM*FT 29
           Y++R     Y  S+   + L  L  + Y T H L+Y  F+ FT
Sbjct: 51  YNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFT 93


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 168 FTIDGAVSTYV*VNY 212
           FT+ GA +TY+ + Y
Sbjct: 645 FTVVGAATTYITIIY 659


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 187 TAPSIVN*WYYDIRTFRKMYN 125
           T P+ +N   YD+R  RK YN
Sbjct: 209 TPPNKLN--CYDLRRVRKNYN 227


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 112 KKIRLEKLCVNVYITQHSL 56
           K  RLEKL   VY+T  S+
Sbjct: 24  KHHRLEKLVPCVYLTSFSV 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,237
Number of Sequences: 336
Number of extensions: 1584
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)