Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0842
         (808 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IJJ6 Cluster: Putative uncharacterized protein; n=1; ...    36   1.6  
UniRef50_Q8IC23 Cluster: Putative uncharacterized protein PF07_0...    34   4.8  
UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep: C...    33   6.4  

>UniRef50_Q8IJJ6 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 2111

 Score = 35.5 bits (78), Expect = 1.6
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 601  NILNLFSLKI-FNNLFYNSRCFFNYYIHFSFKNTFKR*YFITV*FSLLREKHKHN 440
            N ++L  + I +NN FY     F+ YI ++ +  +K  YFI   F LL+  +K+N
Sbjct: 1468 NFISLSHINILYNNYFYLKYFLFDAYIEYNLEYIYKLYYFIVNYFYLLQYMNKNN 1522


>UniRef50_Q8IC23 Cluster: Putative uncharacterized protein
           PF07_0018; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PF07_0018 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1337

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 604 RNILNLFSL-KIFNNLFYNSRCFFNYYIHFSFKNTFKR*YFITV*FSLLREKHKH 443
           R +L ++++ K+++ ++Y + CF NYY +   KN  K     +  F LL  K+ H
Sbjct: 143 RVVLPIYNIHKLYSYIYYENYCFKNYYKNILSKNDIKELKKDSCPFILLNHKNAH 197


>UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep:
           Cytochrome b - Plasmodium falciparum
          Length = 376

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 10/30 (33%), Positives = 23/30 (76%)
 Frame = -2

Query: 576 KYLIIYFIIPDVSLIIIYIFLLRIHLNGNT 487
           ++ +++FI+P + L I++I +  +HL+G+T
Sbjct: 168 RFFVLHFILPFIGLCIVFIHIFFLHLHGST 197


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,980,868
Number of Sequences: 1657284
Number of extensions: 10552843
Number of successful extensions: 24072
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24048
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)