Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0842
         (808 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    27   0.90 
AY330174-1|AAQ16280.1|  178|Anopheles gambiae odorant-binding pr...    23   8.4  
AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative odorant-b...    23   8.4  

>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 26.6 bits (56), Expect = 0.90
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 598 ILNLFSLKIFNNLFYNSRCFFNYYIH 521
           I  +F L I+NNL Y  R + + Y H
Sbjct: 11  IAKVFELVIYNNLLYACRSYLSPYQH 36


>AY330174-1|AAQ16280.1|  178|Anopheles gambiae odorant-binding
           protein AgamOBP47 protein.
          Length = 178

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
 Frame = -2

Query: 183 IFT-NDQLH-IKSYHSRCHF 130
           +FT ND  + +KSYHS+C F
Sbjct: 158 LFTVNDDCNKLKSYHSKCPF 177


>AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative
           odorant-binding protein OBPjj2 protein.
          Length = 228

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
 Frame = -2

Query: 183 IFT-NDQLH-IKSYHSRCHF 130
           +FT ND  + +KSYHS+C F
Sbjct: 208 LFTVNDDCNKLKSYHSKCPF 227


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,870
Number of Sequences: 2352
Number of extensions: 10714
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)