Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0840
(432 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 172 2e-42
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 151 5e-36
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 137 1e-31
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 116 2e-25
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 109 3e-23
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 99 5e-20
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 85 5e-16
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 85 6e-16
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 82 4e-15
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 76 4e-13
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 76 4e-13
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 72 6e-12
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 72 6e-12
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 71 1e-11
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 69 4e-11
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 47 1e-04
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 45 6e-04
UniRef50_O93636 Cluster: 30S ribosomal protein S7P; n=1; Methano... 37 0.21
UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n... 37 0.21
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 36 0.28
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 36 0.36
UniRef50_Q4SMB1 Cluster: Chromosome 3 SCAF14553, whole genome sh... 36 0.48
UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7; n... 35 0.84
UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211; Bacter... 34 1.1
UniRef50_Q89CU8 Cluster: Bll7697 protein; n=1; Bradyrhizobium ja... 33 1.9
UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor; ... 33 1.9
UniRef50_Q4WFB8 Cluster: C6 transcription factor, putative; n=3;... 33 1.9
UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7; n... 33 1.9
UniRef50_A7SRR2 Cluster: Predicted protein; n=1; Nematostella ve... 33 2.6
UniRef50_Q83ES8 Cluster: 30S ribosomal protein S7; n=11; Bacteri... 33 2.6
UniRef50_UPI0000DB7910 Cluster: PREDICTED: similar to mitochondr... 33 3.4
UniRef50_Q654W8 Cluster: Putative uncharacterized protein OJ1288... 33 3.4
UniRef50_Q06J33 Cluster: Chloroplast 30S ribosomal protein S7; n... 33 3.4
UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|R... 32 4.5
UniRef50_A7RSV7 Cluster: Predicted protein; n=1; Nematostella ve... 32 4.5
UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albic... 32 4.5
UniRef50_A5A7J1 Cluster: Glycoprotein 130 homologue; n=1; Parali... 32 5.9
UniRef50_Q6AFU2 Cluster: ABC transporter, ATP-binding protein; n... 32 5.9
UniRef50_A6SU82 Cluster: DNA topoisomerase III; n=57; Betaproteo... 32 5.9
UniRef50_Q1NST9 Cluster: Putative uncharacterized protein; n=2; ... 31 7.8
UniRef50_Q0C2V7 Cluster: Putative uncharacterized protein; n=1; ... 31 7.8
UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1; ... 31 7.8
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 172 bits (419), Expect = 2e-42
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +1
Query: 1 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 180
S+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTV
Sbjct: 75 SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 134
Query: 181 RRQAVDVSPLRRVNQAIWLLCTGAR 255
RRQAVDVSPLRRVNQAIWLLCTGAR
Sbjct: 135 RRQAVDVSPLRRVNQAIWLLCTGAR 159
Score = 92.3 bits (219), Expect = 4e-18
Identities = 49/64 (76%), Positives = 53/64 (82%), Gaps = 3/64 (4%)
Frame = +3
Query: 207 LAPSQPSNLAFVHRCT---EAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVA 377
++P + N A CT EAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVA
Sbjct: 141 VSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVA 200
Query: 378 KSNR 389
KSNR
Sbjct: 201 KSNR 204
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 151 bits (367), Expect = 5e-36
Identities = 70/85 (82%), Positives = 79/85 (92%)
Frame = +1
Query: 1 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 180
SLMMHGRNNGKKLMAVRI+KHA EIIHLLT +NP+QV+V A++NSGPRED+TRIG AG V
Sbjct: 68 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 127
Query: 181 RRQAVDVSPLRRVNQAIWLLCTGAR 255
RRQAVD+SPLRRVNQAI+LL TGAR
Sbjct: 128 RRQAVDISPLRRVNQAIYLLTTGAR 152
Score = 87.4 bits (207), Expect = 1e-16
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = +3
Query: 255 EAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 389
EAAFRNIK+IAEC+ADELINAAKGSSNSYAIKKKDE+ERVAK+NR
Sbjct: 153 EAAFRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 197
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 137 bits (331), Expect = 1e-31
Identities = 68/85 (80%), Positives = 74/85 (87%)
Frame = +1
Query: 1 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 180
SLMM+GRNNGKKL+A RIVKHAFEII LLT +NPLQVLV A+ GPREDSTRIG AGTV
Sbjct: 74 SLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPREDSTRIGSAGTV 133
Query: 181 RRQAVDVSPLRRVNQAIWLLCTGAR 255
RRQAVDVSPLRRVNQA+ L+ GAR
Sbjct: 134 RRQAVDVSPLRRVNQALALITIGAR 158
Score = 85.4 bits (202), Expect = 5e-16
Identities = 39/45 (86%), Positives = 45/45 (100%)
Frame = +3
Query: 255 EAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 389
EAAFRN+K+I+EC+A+E+INAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 159 EAAFRNVKSISECLAEEIINAAKGSSNSYAIKKKDELERVAKSNR 203
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 116 bits (280), Expect = 2e-25
Identities = 55/62 (88%), Positives = 58/62 (93%)
Frame = +1
Query: 70 EIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG 249
++ HLL +NPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG 233
Query: 250 AR 255
AR
Sbjct: 234 AR 235
Score = 92.3 bits (219), Expect = 4e-18
Identities = 49/64 (76%), Positives = 53/64 (82%), Gaps = 3/64 (4%)
Frame = +3
Query: 207 LAPSQPSNLAFVHRCT---EAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVA 377
++P + N A CT EAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVA
Sbjct: 217 VSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVA 276
Query: 378 KSNR 389
KSNR
Sbjct: 277 KSNR 280
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 109 bits (261), Expect = 3e-23
Identities = 53/85 (62%), Positives = 67/85 (78%)
Frame = +1
Query: 1 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 180
SLM HGRN+GKK +A+ I + A IIH +T +NPLQVLV AI+NSGPRED+ RIGRAG++
Sbjct: 79 SLMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGRAGSM 138
Query: 181 RRQAVDVSPLRRVNQAIWLLCTGAR 255
RR +VDVSPL+R++ AI L G R
Sbjct: 139 RRTSVDVSPLKRISIAISNLSAGIR 163
Score = 57.2 bits (132), Expect = 1e-07
Identities = 26/44 (59%), Positives = 35/44 (79%)
Frame = +3
Query: 258 AAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 389
A+FRN T+AE +A+ELI A+ S NSYA+ KK E+ER+A+SNR
Sbjct: 165 ASFRNRITLAEAIANELIAASTNSQNSYAVNKKKEIERIAQSNR 208
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 98.7 bits (235), Expect = 5e-20
Identities = 42/86 (48%), Positives = 62/86 (72%)
Frame = +1
Query: 1 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 180
SLM+ RN+GKK+ + IVKHAF ++H TG+NP+Q+LV AI N P EDS + +G
Sbjct: 78 SLMLKSRNSGKKIKTIAIVKHAFYLLHKTTGKNPIQLLVDAISNCAPHEDSLMLSNSGQK 137
Query: 181 RRQAVDVSPLRRVNQAIWLLCTGARR 258
+R+AVDVSP R+++QAI+ + G ++
Sbjct: 138 KREAVDVSPYRKISQAIYFIAVGTKK 163
Score = 47.2 bits (107), Expect = 1e-04
Identities = 22/41 (53%), Positives = 33/41 (80%)
Frame = +3
Query: 255 EAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVA 377
+AAF+N K+I+ + DE++NAA+ S+ SYAIKKK +LE+ A
Sbjct: 163 KAAFKNPKSISIALHDEILNAARNSNTSYAIKKKLDLEKNA 203
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 85.4 bits (202), Expect = 5e-16
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = +1
Query: 4 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 183
LM G N GKK A++IV+ AF+I+H T ENP+QVLV+A+ N+ PRE++ R+ G
Sbjct: 82 LMKTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLVSAVENAAPREETVRLKYGGISV 141
Query: 184 RQAVDVSPLRRVNQAIWLLCTGA 252
QAVD +P RRV+QA+ L GA
Sbjct: 142 PQAVDTAPQRRVDQALKFLADGA 164
Score = 33.5 bits (73), Expect = 1.9
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 258 AAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 389
A+F+ AE +A++L AA + +YAI +K E ERVA + R
Sbjct: 167 ASFKTPTDAAEALANQLAGAADYNVQTYAIGQKKEKERVAAAAR 210
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 85.0 bits (201), Expect = 6e-16
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +1
Query: 4 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 183
+M GRN GKK A IVK AF++I+ TG+NPLQV + AIIN+ PRE+ TRI G
Sbjct: 95 MMRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRIIMGGIAY 154
Query: 184 RQAVDVSPLRRVNQAIWLLCTGAR 255
+VDVSP RR++ A+ + GAR
Sbjct: 155 SVSVDVSPQRRLDLALRWITEGAR 178
Score = 51.6 bits (118), Expect = 7e-06
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = +3
Query: 261 AFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 389
+F N K I EC+ADE+I AA SYA++K++ELER+A ++R
Sbjct: 181 SFNNPKPIEECLADEIIAAAANDPKSYAVRKREELERIAAASR 223
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 82.2 bits (194), Expect = 4e-15
Identities = 42/85 (49%), Positives = 58/85 (68%)
Frame = +1
Query: 4 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 183
+M +N GKK +A IVK AF+IIH TGENP+QVLV A+ N+ PRE++T I G
Sbjct: 69 VMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETTTIIYGGISY 128
Query: 184 RQAVDVSPLRRVNQAIWLLCTGARR 258
+AVD SP RR++ A+ L+ GA++
Sbjct: 129 HEAVDSSPQRRLDIALRLITEGAQQ 153
Score = 48.4 bits (110), Expect = 6e-05
Identities = 20/45 (44%), Positives = 35/45 (77%)
Frame = +3
Query: 255 EAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 389
+ AFRN K I EC+A+E+I AA+ + ++I++K+E+ER+A++ R
Sbjct: 153 QRAFRNPKPIEECLAEEIIAAARYDTECHSIRRKEEIERIAEAAR 197
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 75.8 bits (178), Expect = 4e-13
Identities = 39/98 (39%), Positives = 60/98 (61%)
Frame = +1
Query: 4 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 183
LM N GKK +A+ IV+ AFE+I+ T NP++VLV AI N+GPRE++ R+ G
Sbjct: 76 LMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGPREETVRLKYGGINV 135
Query: 184 RQAVDVSPLRRVNQAIWLLCTGARRLHSEILKQSQSVL 297
++VD +PLRRV+ AI + + + K + ++L
Sbjct: 136 PKSVDTAPLRRVDSAIGFIAEAVWKSSRKSKKPASAIL 173
Score = 42.7 bits (96), Expect = 0.003
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 225 SNLAFVHRCTEAAFRNIKTIAECV-ADELINAAKGSSNSYAIKKKDELERVAKSNR 389
S + F+ + R K A + ADELI A+KG + Y++ KK+E ER+AKS R
Sbjct: 149 SAIGFIAEAVWKSSRKSKKPASAILADELIAASKGDAKCYSVGKKEEKERIAKSAR 204
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 75.8 bits (178), Expect = 4e-13
Identities = 39/80 (48%), Positives = 52/80 (65%)
Frame = +1
Query: 13 HGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQA 192
H N KK+ A +VK AF+II TG+NP+QVLV AI N+ PRED+T + G A
Sbjct: 93 HRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVA 152
Query: 193 VDVSPLRRVNQAIWLLCTGA 252
VD+SPLRR++ A+ + GA
Sbjct: 153 VDISPLRRLDVALRNIALGA 172
Score = 39.9 bits (89), Expect = 0.022
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +3
Query: 264 FRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 389
+R + AE +A+E+I AA SYA KK E+ER+A+S+R
Sbjct: 177 YRTKMSFAEALAEEIILAANKDPKSYAYSKKLEIERIAESSR 218
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 71.7 bits (168), Expect = 6e-12
Identities = 36/86 (41%), Positives = 56/86 (65%)
Frame = +1
Query: 1 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 180
+LM + GKK A +++ AF+II T +NP+Q+LV+AI NS PRE+ TR+ G
Sbjct: 53 NLMRTEKWTGKKYSAYKVMSQAFDIIATKTKQNPVQILVSAIENSAPREEVTRLKYGGIA 112
Query: 181 RRQAVDVSPLRRVNQAIWLLCTGARR 258
++VDVSP RR+++A+ + GA +
Sbjct: 113 VPKSVDVSPSRRLDEALRNIARGATK 138
Score = 49.6 bits (113), Expect = 3e-05
Identities = 22/46 (47%), Positives = 36/46 (78%)
Frame = +3
Query: 252 TEAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 389
T+A+F++ I +C+A+E++ AA+ +NS+AI KK+E+ERVA S R
Sbjct: 137 TKASFKHKIHIQDCLANEILLAARNDANSFAISKKEEIERVAASAR 182
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 71.7 bits (168), Expect = 6e-12
Identities = 36/83 (43%), Positives = 53/83 (63%)
Frame = +1
Query: 1 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 180
+LM N GKK + +R V+ AF+I++ T +NP+QVLV AI N+GPRE+ R+ G
Sbjct: 60 NLMRTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGIS 119
Query: 181 RRQAVDVSPLRRVNQAIWLLCTG 249
+AVD +P RRV+ A+ + G
Sbjct: 120 VPKAVDTAPQRRVDTALRYISMG 142
Score = 48.8 bits (111), Expect = 5e-05
Identities = 22/44 (50%), Positives = 33/44 (75%)
Frame = +3
Query: 258 AAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 389
AAF++ +++AEC+A ELI AA + S++I +KD ERVAK+ R
Sbjct: 146 AAFKSKRSVAECLATELIGAANRDTKSFSINRKDAKERVAKAAR 189
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 70.9 bits (166), Expect = 1e-11
Identities = 38/83 (45%), Positives = 51/83 (61%)
Frame = +1
Query: 4 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 183
LM N GKK + I++ A I+ T ENP+QV+V A+ NSGPRE++TRI G
Sbjct: 65 LMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAF 124
Query: 184 RQAVDVSPLRRVNQAIWLLCTGA 252
Q+VDVSP RR++ A + GA
Sbjct: 125 LQSVDVSPSRRLDTAFRNISLGA 147
Score = 49.2 bits (112), Expect = 4e-05
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 4/65 (6%)
Frame = +3
Query: 207 LAPSQPSNLAFVH---RCTEAAFRNIKTIAECVADELINAAKGS-SNSYAIKKKDELERV 374
++PS+ + AF + ++ A ++ K+IA+C+ADEL+ A+K S+A+KKK+E ERV
Sbjct: 130 VSPSRRLDTAFRNISLGASQGAHKSKKSIAQCLADELVAASKADMQKSFAVKKKEEKERV 189
Query: 375 AKSNR 389
A+S R
Sbjct: 190 AQSAR 194
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 68.9 bits (161), Expect = 4e-11
Identities = 34/41 (82%), Positives = 35/41 (85%)
Frame = +1
Query: 1 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 123
S+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 12 SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 47.2 bits (107), Expect = 1e-04
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 324 GSSNSYAIKKKDELERVAKSNR 389
GSSNSYAIKKKDELERVAKSNR
Sbjct: 56 GSSNSYAIKKKDELERVAKSNR 77
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 45.2 bits (102), Expect = 6e-04
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +1
Query: 25 NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP--REDSTRIGRAGTVRRQAVD 198
+GKK +A IV AFEII + T E+PL V AI N+ P + RIG G+ + V+
Sbjct: 33 SGKKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRNASPVVEVKARRIG--GSTYQVPVE 90
Query: 199 VSPLRRVNQAI-WLLCTGARRL 261
VS R N ++ W++ +R+
Sbjct: 91 VSGFRATNLSLRWIIQYSRQRV 112
>UniRef50_O93636 Cluster: 30S ribosomal protein S7P; n=1;
Methanococcoides methylutens|Rep: 30S ribosomal protein
S7P - Methanococcoides methylutens
Length = 69
Score = 36.7 bits (81), Expect = 0.21
Identities = 17/45 (37%), Positives = 30/45 (66%)
Frame = +3
Query: 255 EAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 389
++AF++ + +E +A ELI A+ + ++I +KD ERVAK+ R
Sbjct: 25 QSAFKSKRXASESLASELIAASNRDAKCFSINRKDGKERVAKAAR 69
>UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n=3;
Chlorophyceae|Rep: Chloroplast 30S ribosomal protein S7
- Stigeoclonium helveticum (Green alga)
Length = 174
Score = 36.7 bits (81), Expect = 0.21
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = +1
Query: 25 NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVS 204
NGKK +A RIV F I +NP++V A+ N PR + RAG++ +Q V
Sbjct: 33 NGKKSIAYRIVYSVFRKISETMNQNPVEVWEKALNNVKPRVEVKPRRRAGSI-QQVPRVM 91
Query: 205 PLRRVNQAI---WLLCTGARRLHSEILKQ 282
P +AI W++ ++ +++ +
Sbjct: 92 PSAERARAIAIRWIVSACQKKAGKDMISK 120
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 36.3 bits (80), Expect = 0.28
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +1
Query: 28 GKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRED--STRIGRAGTVRRQAVDV 201
GKK +A RI+ +AF+II TGE+ + V +AI P + + RIG G+ + ++V
Sbjct: 34 GKKHLAQRIIYNAFDIIKQRTGEDAILVFESAIKKVTPLVEVKARRIG--GSTYQVPMEV 91
Query: 202 SPLRRVNQAI-WL 237
R N A+ W+
Sbjct: 92 RAFRGTNLALRWI 104
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 35.9 bits (79), Expect = 0.36
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +1
Query: 25 NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 141
+GKK A +IV A II TGENP+ VL AI P
Sbjct: 136 DGKKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISP 174
>UniRef50_Q4SMB1 Cluster: Chromosome 3 SCAF14553, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF14553, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 292
Score = 35.5 bits (78), Expect = 0.48
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 264 FRNIKTIAECVADELINAAKGSSNSYAIKKKDELER 371
FRN+K I + V D+L+ KGSS + K+K+EL++
Sbjct: 126 FRNVKDIEDHVKDKLLLVKKGSSTELSDKEKNELKK 161
>UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7;
n=191; Magnoliophyta|Rep: Chloroplast 30S ribosomal
protein S7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 155
Score = 34.7 bits (76), Expect = 0.84
Identities = 17/38 (44%), Positives = 29/38 (76%)
Frame = +3
Query: 276 KTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 389
+ +A ++ EL++AAKGS + AI+KK+E R+A++NR
Sbjct: 114 RNMAFKLSSELVDAAKGSGD--AIRKKEETHRMAEANR 149
>UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211;
Bacteria|Rep: 30S ribosomal protein S7 - Streptococcus
pneumoniae
Length = 156
Score = 34.3 bits (75), Expect = 1.1
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 25 NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQA-VDV 201
+GK+ A IV AFE I TG + L+V TA+ N P + R R G Q V V
Sbjct: 33 DGKRGTAASIVYGAFEQIKEATGNDALEVFETAMENIMPVLE-VRARRVGGSNYQVPVKV 91
Query: 202 SPLRRVNQAIWLLCTGAR 255
P RR + L T AR
Sbjct: 92 RPERRTTLGLRWLVTIAR 109
>UniRef50_Q89CU8 Cluster: Bll7697 protein; n=1; Bradyrhizobium
japonicum|Rep: Bll7697 protein - Bradyrhizobium
japonicum
Length = 393
Score = 33.5 bits (73), Expect = 1.9
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +1
Query: 43 AVRIVKHAFEII-HLLTGENPLQV-LVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRR 216
A R+ +HA EI H L L + L +IN + + + RA + +QAV + P
Sbjct: 160 ARRLFEHALEIDPHTLRAMTGLSLTLANLVINGQSPDPAGDLSRADELSQQAVGLDPNNA 219
Query: 217 VNQAIWLLCTGARRLHSEILKQSQSVLQMN 306
A+ A+R E +Q + LQ+N
Sbjct: 220 AAHALRARALQAQRRQKEAAEQYRISLQIN 249
>UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor;
n=1; Desulfuromonas acetoxidans DSM 684|Rep: Multicopper
oxidase, type 3 precursor - Desulfuromonas acetoxidans
DSM 684
Length = 782
Score = 33.5 bits (73), Expect = 1.9
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 122 PLSTLDPVKIRLGSVVRVQFVVKPLMFHP 208
PLS D ++IR G VVR V + +M+HP
Sbjct: 507 PLSAGDDIRIRQGEVVRFMMVNRTMMYHP 535
>UniRef50_Q4WFB8 Cluster: C6 transcription factor, putative; n=3;
Trichocomaceae|Rep: C6 transcription factor, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 779
Score = 33.5 bits (73), Expect = 1.9
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +3
Query: 204 TLAPSQPSNLAFVHRCTEAAFRNIKTIAECVADELINAAKGSS 332
++AP +PS AF C +AA ++ +CVA +IN A+G +
Sbjct: 566 SIAPEKPSTSAFCQECIDAARETLQEHDQCVA--VINKAQGKT 606
>UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7;
n=94; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Zea mays (Maize)
Length = 156
Score = 33.5 bits (73), Expect = 1.9
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 25 NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRED-STRIGRAGTVRRQAVDV 201
+GKK +A +I+ A + I T NPL VL AI P TR + G+ R+ +++
Sbjct: 33 DGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAIRRVTPNIGVKTRRNKKGSTRKVPIEI 92
Query: 202 SPLRRVNQAI-WLLCTGARR 258
+ AI WLL +R
Sbjct: 93 GSKQGRALAIRWLLEASQKR 112
Score = 31.9 bits (69), Expect = 5.9
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +3
Query: 276 KTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 389
+ +A ++ EL++AAKGS AI+KK+ R+A++NR
Sbjct: 115 RNMAFKLSSELVDAAKGSGG--AIRKKEATHRMAEANR 150
>UniRef50_A7SRR2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 237
Score = 33.1 bits (72), Expect = 2.6
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Frame = +1
Query: 79 HLLTGENPLQVLVTAIIN----SGP--REDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLL 240
+ L+ +NP+ V V A IN SGP +EDST R Q +D++ + + I +
Sbjct: 30 YCLSDDNPMNVDVEADINNIAGSGPTEKEDSTSATDIVDYRHQ-LDINSDEKGPKIIESV 88
Query: 241 CTGARRLHSEILKQSQSVLQMN*LMQLRVHLTPTPSKRR 357
TGA +LH + + Q L +++ H TP K R
Sbjct: 89 ATGANKLHLQRISAEQCKL------KIKQHFTPENVKVR 121
>UniRef50_Q83ES8 Cluster: 30S ribosomal protein S7; n=11;
Bacteria|Rep: 30S ribosomal protein S7 - Coxiella
burnetii
Length = 161
Score = 33.1 bits (72), Expect = 2.6
Identities = 16/41 (39%), Positives = 29/41 (70%)
Frame = +3
Query: 267 RNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 389
RN KT+ +A E+++A +G AIKK++++ R+AK+N+
Sbjct: 116 RNEKTMVLRLAHEILDAVEGRGG--AIKKREDVHRMAKANQ 154
>UniRef50_UPI0000DB7910 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S7 CG5108-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to mitochondrial ribosomal protein S7
CG5108-PA - Apis mellifera
Length = 216
Score = 32.7 bits (71), Expect = 3.4
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 270 NIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 389
N + I++ +A E+I+AAK IKKK EL ++ ++NR
Sbjct: 171 NTEKISDMLAKEIIDAAKNQGR--VIKKKQELHKLCEANR 208
>UniRef50_Q654W8 Cluster: Putative uncharacterized protein
OJ1288_C01.22; n=2; Oryza sativa|Rep: Putative
uncharacterized protein OJ1288_C01.22 - Oryza sativa
subsp. japonica (Rice)
Length = 219
Score = 32.7 bits (71), Expect = 3.4
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 169 AGTVRRQAVDVSPLRRVNQA--IWLLCTGARRLHSEILKQSQSVLQMN*LMQLRVHLTPT 342
AGT R+ + + R A WLL G + H+ + Q +L + + R H TP
Sbjct: 102 AGTCTRRVIVAAAPPRATPAHDAWLLILGLHQTHAW---RPQLLLSLR--LHWRRHATPW 156
Query: 343 PSKRRTSWSVLL 378
PS R +WS+ L
Sbjct: 157 PSSTRNAWSLSL 168
>UniRef50_Q06J33 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Bigelowiella natans|Rep: Chloroplast 30S ribosomal
protein S7 - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 159
Score = 32.7 bits (71), Expect = 3.4
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +3
Query: 270 NIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 389
N +I + ++ E++NA+ G AIKK+DE+ R+A++N+
Sbjct: 114 NKYSIIKRLSSEIVNASNGMGE--AIKKRDEMHRMAEANK 151
>UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|Rep:
30S ribosomal protein S7 - Elegia fenestrata
Length = 217
Score = 32.3 bits (70), Expect = 4.5
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +3
Query: 207 LAPSQPSNLAFVHRCTEAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSN 386
+ P Q LA + R + +A ++ EL++AAKG AI+KK+E R+A++N
Sbjct: 90 IQPRQAKVLAIRWLLEASRKRPGQNMAIKLSAELVDAAKGKGG--AIRKKEETRRMAEAN 147
Query: 387 R 389
R
Sbjct: 148 R 148
Score = 31.9 bits (69), Expect = 5.9
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 25 NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVS 204
+GKK +A +I A + I T NPL VL AI P+ +AG R+ +++
Sbjct: 33 HGKKALAYQIFYRAAQKIQQ-TETNPLFVLREAIRRITPQIGVKARRKAGLTRQVPIEIQ 91
Query: 205 PLRRVNQAI-WLLCTGARR 258
P + AI WLL +R
Sbjct: 92 PRQAKVLAIRWLLEASRKR 110
>UniRef50_A7RSV7 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1203
Score = 32.3 bits (70), Expect = 4.5
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Frame = -2
Query: 320 SCIN*FICNTLC---DCFNISECSL---RAPVHKSQIAWLTRRKGETSTA*RRTVPARPI 159
SC F+ C DC+ C R + QIA++ RR+ ++S +P PI
Sbjct: 792 SCDLAFMIGDTCIAVDCYREELCQAVRARPTSYNPQIAYVRRRELQSSIRKANELPKAPI 851
Query: 158 L---VESSRGPELIMAVTSTC 105
L + S R P + + TSTC
Sbjct: 852 LAHKIVSDRLPHMTILKTSTC 872
>UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albicans
IPF3361; n=2; Saccharomycetaceae|Rep: Similar to
CA4785|IPF3361 Candida albicans IPF3361 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 263
Score = 32.3 bits (70), Expect = 4.5
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 25 NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVS 204
+GKK A +I+ A I++L T ++PL +L + P +T++ + G + + V
Sbjct: 141 DGKKSKAQKILSRALYIVYLKTRKDPLVILEETLDKMAPLM-ATKVQKTGAAKNRTVPY- 198
Query: 205 PLRR 216
PL++
Sbjct: 199 PLKK 202
>UniRef50_A5A7J1 Cluster: Glycoprotein 130 homologue; n=1;
Paralichthys olivaceus|Rep: Glycoprotein 130 homologue -
Paralichthys olivaceus (Japanese flounder)
Length = 801
Score = 31.9 bits (69), Expect = 5.9
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = -2
Query: 302 ICNTLCDCFNISECSLRAPVHKSQIAWLTRRKGETSTA*RRTVPARPILVESSRGPELIM 123
IC+ + D NI+ S+RA + ++W+T+ + E S A V + + GP L +
Sbjct: 494 ICSRIGDPANITIDSVRANDRSATVSWITKSQEECSGA----VINYTVFCSTQEGPTLNV 549
Query: 122 AVTSTCR 102
V ST R
Sbjct: 550 TVDSTKR 556
>UniRef50_Q6AFU2 Cluster: ABC transporter, ATP-binding protein; n=4;
Actinobacteria (class)|Rep: ABC transporter, ATP-binding
protein - Leifsonia xyli subsp. xyli
Length = 562
Score = 31.9 bits (69), Expect = 5.9
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 225 SNLAFVHRCTEAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDEL 365
S + FV + ++F + +IA+CVA+ L+ K SS + A + D+L
Sbjct: 372 SEIGFVFQDPASSFNPLLSIADCVAEPLVVHGKASSPADARARVDDL 418
>UniRef50_A6SU82 Cluster: DNA topoisomerase III; n=57;
Betaproteobacteria|Rep: DNA topoisomerase III -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 881
Score = 31.9 bits (69), Expect = 5.9
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 129 DNGSHEYLQRVFSS*QVNNFKRMFDNTYGHQFFAIVPT 16
+N H++ +++ + V KR+FDNT FAI+PT
Sbjct: 353 NNNYHQFAKQITDNKWVKPNKRIFDNTKISDHFAIIPT 390
>UniRef50_Q1NST9 Cluster: Putative uncharacterized protein; n=2;
delta proteobacterium MLMS-1|Rep: Putative
uncharacterized protein - delta proteobacterium MLMS-1
Length = 167
Score = 31.5 bits (68), Expect = 7.8
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 246 RCTEAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELE 368
RC +A F+ K C EL +A +GS+++ A K DE++
Sbjct: 51 RCWQALFQQEKPRLNCNIPELSDAGEGSNHTIAYDKFDEVD 91
>UniRef50_Q0C2V7 Cluster: Putative uncharacterized protein; n=1;
Hyphomonas neptunium ATCC 15444|Rep: Putative
uncharacterized protein - Hyphomonas neptunium (strain
ATCC 15444)
Length = 289
Score = 31.5 bits (68), Expect = 7.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -1
Query: 231 DCLVDSAQG*NINGLTTNCTRTTDPSRIFTGSRVDNGSHEY 109
D L+D G N+ L T T PS++FT +R N Y
Sbjct: 61 DALLDDLFGLNVRALATLWVSCTQPSKLFTAARDQNWLDRY 101
>UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 299
Score = 31.5 bits (68), Expect = 7.8
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +1
Query: 25 NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVS 204
+GKK A R + II +T NPL ++ AI + P + G + V ++
Sbjct: 176 DGKKAQAQRFITRTLSIISSVTNSNPLPLIHDAIYKAAPLVKVQSKKQGGKSLQVPVALT 235
Query: 205 PLRRVNQAI-WLLCTGARRLHSEI 273
+ +A+ W++ +R E+
Sbjct: 236 QRQSTRKALTWIIEASKKRPDREL 259
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 426,837,096
Number of Sequences: 1657284
Number of extensions: 7753510
Number of successful extensions: 19507
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 19030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19500
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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